RNA–Protein interactions for RNA: ENST00000556628.5

HNRNPC-226, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,156 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-226ENST00000556628 MYCNP04198 464 aaPredicted RBP13.69□□□□□ -0.22
HNRNPC-226ENST00000556628 RAD54L2Q9Y4B4 1467 aa13.68□□□□□ -0.22
HNRNPC-226ENST00000556628 CUX1P39880 1505 aa13.67□□□□□ -0.22
HNRNPC-226ENST00000556628 WDR97A6NE52 1622 aa13.66□□□□□ -0.22
HNRNPC-226ENST00000556628 CHD1O14646 1710 aa13.66□□□□□ -0.22
HNRNPC-226ENST00000556628 TDRD9Q8NDG6 1382 aaKnown RBP13.64□□□□□ -0.23
HNRNPC-226ENST00000556628 FBLN2P98095 1184 aa13.64□□□□□ -0.23
HNRNPC-226ENST00000556628 SLC4A1APQ9BWU0 796 aaKnown RBP13.61□□□□□ -0.23
HNRNPC-226ENST00000556628 RIMBP3CA6NJZ7 1639 aa13.61□□□□□ -0.23
HNRNPC-226ENST00000556628 RIMBP3BA6NNM3 1639 aa13.61□□□□□ -0.23
HNRNPC-226ENST00000556628 RIMBP3Q9UFD9 1639 aa13.61□□□□□ -0.23
HNRNPC-226ENST00000556628 GRIN2BQ13224 1484 aa13.58□□□□□ -0.24
HNRNPC-226ENST00000556628 SNAPC4Q5SXM2 1469 aa13.58□□□□□ -0.24
HNRNPC-226ENST00000556628 MAGI1Q96QZ7 1491 aaPredicted RBP13.56□□□□□ -0.24
HNRNPC-226ENST00000556628 ARHGEF11O15085 1522 aa13.56□□□□□ -0.24
HNRNPC-226ENST00000556628 CHMP7Q8WUX9 453 aaPredicted RBP13.56□□□□□ -0.24
HNRNPC-226ENST00000556628 EHMT2Q96KQ7 1210 aa13.56□□□□□ -0.24
HNRNPC-226ENST00000556628 RBM42Q9BTD8 480 aaKnown RBP13.56□□□□□ -0.24
HNRNPC-226ENST00000556628 PBRM1Q86U86 1689 aa13.56□□□□□ -0.24
HNRNPC-226ENST00000556628 WRNQ14191 1432 aaPredicted RBP eCLIP13.54□□□□□ -0.24
HNRNPC-226ENST00000556628 GAPVD1Q14C86 1478 aa13.54□□□□□ -0.24
HNRNPC-226ENST00000556628 ABCA10Q8WWZ4 1543 aa13.54□□□□□ -0.24
HNRNPC-226ENST00000556628 BIVM-ERCC5R4GMW8 1640 aa13.53□□□□□ -0.24
HNRNPC-226ENST00000556628 POLA2Q14181 598 aa13.53□□□□□ -0.24
HNRNPC-226ENST00000556628 TOP2BQ02880 1626 aa13.53□□□□□ -0.24
HNRNPC-226ENST00000556628 SYNJ1O43426 1573 aa13.52□□□□□ -0.25
HNRNPC-226ENST00000556628 ABCA5Q8WWZ7 1642 aa13.51□□□□□ -0.25
HNRNPC-226ENST00000556628 SYNJ2O15056 1496 aa13.51□□□□□ -0.25
HNRNPC-226ENST00000556628 CYB5RLQ6IPT4 315 aa13.47□□□□□ -0.25
HNRNPC-226ENST00000556628 CLASP1Q7Z460 1538 aa13.46□□□□□ -0.25
HNRNPC-226ENST00000556628 FOXD4L1Q9NU39 408 aa13.44□□□□□ -0.26
HNRNPC-226ENST00000556628 ARAP1Q96P48 1450 aa13.42□□□□□ -0.26
HNRNPC-226ENST00000556628 ADAMTS12P58397 1594 aa13.4□□□□□ -0.26
HNRNPC-226ENST00000556628 GRIN2AQ12879 1464 aa13.39□□□□□ -0.27
HNRNPC-226ENST00000556628 ERICH3Q5RHP9 1530 aa13.39□□□□□ -0.27
HNRNPC-226ENST00000556628 FHAD1B1AJZ9 1412 aa13.38□□□□□ -0.27
HNRNPC-226ENST00000556628 CEP170Q5SW79 1584 aa13.32□□□□□ -0.28
HNRNPC-226ENST00000556628 ATF5Q9Y2D1 282 aaPredicted RBP13.32□□□□□ -0.28
HNRNPC-226ENST00000556628 NUP160Q12769 1436 aa13.31□□□□□ -0.28
HNRNPC-226ENST00000556628 ZBTB12Q9Y330 459 aaPredicted RBP13.3□□□□□ -0.28
HNRNPC-226ENST00000556628 CHRDL2Q6WN34 429 aa13.29□□□□□ -0.28
HNRNPC-226ENST00000556628 CSRNP3Q8WYN3 585 aa13.29□□□□□ -0.28
HNRNPC-226ENST00000556628 KIF27Q86VH2 1401 aa13.28□□□□□ -0.28
HNRNPC-226ENST00000556628 SHROOM2Q13796 1616 aa13.26□□□□□ -0.29
HNRNPC-226ENST00000556628 CUL7Q14999 1698 aa13.25□□□□□ -0.29
HNRNPC-226ENST00000556628 ERCC6L2Q5T890 1561 aa13.24□□□□□ -0.29
HNRNPC-226ENST00000556628 IGF1RP08069 1367 aa13.21□□□□□ -0.29
HNRNPC-226ENST00000556628 JPH4Q96JJ6 628 aa13.21□□□□□ -0.29
HNRNPC-226ENST00000556628 RUSC2Q8N2Y8 1516 aa13.21□□□□□ -0.29
HNRNPC-226ENST00000556628 PRG4Q92954 1404 aaPredicted RBP13.21□□□□□ -0.3
HNRNPC-226ENST00000556628 AKT1S1Q96B36 256 aa13.2□□□□□ -0.3
HNRNPC-226ENST00000556628 ZBTB22O15209 634 aa13.17□□□□□ -0.3
HNRNPC-226ENST00000556628 KIAA0586Q9BVV6 1533 aa13.16□□□□□ -0.3
HNRNPC-226ENST00000556628 CARMIL1Q5VZK9 1371 aa13.16□□□□□ -0.3
HNRNPC-226ENST00000556628 NPM1P06748 294 aaKnown RBP eCLIP13.11□□□□□ -0.31
HNRNPC-226ENST00000556628 CARMIL2Q6F5E8 1435 aa13.07□□□□□ -0.32
HNRNPC-226ENST00000556628 ATXN8OSP0DMR3 200 aa13.07□□□□□ -0.32
HNRNPC-226ENST00000556628 IQGAP2Q13576 1575 aa13.07□□□□□ -0.32
HNRNPC-226ENST00000556628 RAPGEF2Q9Y4G8 1499 aa13.06□□□□□ -0.32
HNRNPC-226ENST00000556628 REM2Q8IYK8 340 aaPredicted RBP13.05□□□□□ -0.32
HNRNPC-226ENST00000556628 TTBK1Q5TCY1 1321 aaPredicted RBP13.03□□□□□ -0.32
HNRNPC-226ENST00000556628 PTPRGP23470 1445 aa13.03□□□□□ -0.32
HNRNPC-226ENST00000556628 ADCY10Q96PN6 1610 aa13.02□□□□□ -0.32
HNRNPC-226ENST00000556628 KIF13AQ9H1H9 1805 aa13.02□□□□□ -0.32
HNRNPC-226ENST00000556628 TNIKQ9UKE5 1360 aa13.01□□□□□ -0.33
HNRNPC-226ENST00000556628 MAPKBP1O60336 1514 aa13□□□□□ -0.33
HNRNPC-226ENST00000556628 CTTNBP2Q8WZ74 1663 aa12.99□□□□□ -0.33
HNRNPC-226ENST00000556628 FAM69CQ0P6D2 419 aa12.97□□□□□ -0.33
HNRNPC-226ENST00000556628 UGGT2Q9NYU1 1516 aa12.97□□□□□ -0.33
HNRNPC-226ENST00000556628 ABCC10Q5T3U5 1492 aa12.97□□□□□ -0.33
HNRNPC-226ENST00000556628 DISP1Q96F81 1524 aa12.95□□□□□ -0.34
HNRNPC-226ENST00000556628 DIP2BQ9P265 1576 aa12.94□□□□□ -0.34
HNRNPC-226ENST00000556628 KIAA0556O60303 1618 aa12.94□□□□□ -0.34
HNRNPC-226ENST00000556628 PIP4P2Q8N4L2 257 aa12.93□□□□□ -0.34
HNRNPC-226ENST00000556628 UACAQ9BZF9 1416 aa12.93□□□□□ -0.34
HNRNPC-226ENST00000556628 ABCC2Q92887 1545 aa12.93□□□□□ -0.34
HNRNPC-226ENST00000556628 PRXQ9BXM0 1461 aa12.92□□□□□ -0.34
HNRNPC-226ENST00000556628 UHRF1BP1LA0JNW5 1464 aa12.91□□□□□ -0.34
HNRNPC-226ENST00000556628 GOLGA3Q08378 1498 aa12.91□□□□□ -0.34
HNRNPC-226ENST00000556628 PITPNM1O00562 1244 aa12.91□□□□□ -0.34
HNRNPC-226ENST00000556628 FAM9AQ8IZU1 332 aaPredicted RBP12.9□□□□□ -0.34
HNRNPC-226ENST00000556628 TSPOAP1O95153 1857 aa12.89□□□□□ -0.35
HNRNPC-226ENST00000556628 PLB1Q6P1J6 1458 aa12.89□□□□□ -0.35
HNRNPC-226ENST00000556628 EEA1Q15075 1411 aa12.88□□□□□ -0.35
HNRNPC-226ENST00000556628 ASXL2Q76L83 1435 aa12.88□□□□□ -0.35
HNRNPC-226ENST00000556628 SP7Q8TDD2 431 aaPredicted RBP12.87□□□□□ -0.35
HNRNPC-226ENST00000556628 ZCCHC11Q5TAX3 1644 aaKnown RBP12.85□□□□□ -0.35
HNRNPC-226ENST00000556628 KDM5BQ9UGL1 1544 aa12.85□□□□□ -0.35
HNRNPC-226ENST00000556628 SPDYE2BA6NHP3 402 aa12.85□□□□□ -0.35
HNRNPC-226ENST00000556628 SPDYE6P0CI01 402 aa12.85□□□□□ -0.35
HNRNPC-226ENST00000556628 SPDYE2Q495Y8 402 aa12.85□□□□□ -0.35
HNRNPC-226ENST00000556628 KDM6BO15054 1643 aa12.84□□□□□ -0.35
HNRNPC-226ENST00000556628 FXR2P51116 673 aaKnown RBP eCLIP12.84□□□□□ -0.354e-14■■■■□ 21.2
HNRNPC-226ENST00000556628 GLI2P10070 1586 aa12.83□□□□□ -0.36
HNRNPC-226ENST00000556628 ABCA8O94911 1581 aa12.8□□□□□ -0.36
HNRNPC-226ENST00000556628 EPRSP07814 1512 aaKnown RBP12.79□□□□□ -0.36
HNRNPC-226ENST00000556628 P3H3Q8IVL6 736 aa12.79□□□□□ -0.36
HNRNPC-226ENST00000556628 WDR7Q9Y4E6 1490 aa12.78□□□□□ -0.36
HNRNPC-226ENST00000556628 MAP3K4Q9Y6R4 1608 aa12.77□□□□□ -0.37
HNRNPC-226ENST00000556628 HAX1O00165 279 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms