RNA–Protein interactions for RNA: ENST00000556626.5

SPTB-208, Transcript of spectrin beta, erythrocytic, humanhuman

TSL 1 (best) BASIC

Gene SPTB, Length 10,153 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTB-208ENST00000556626 P3H3Q8IVL6 736 aa14.17□□□□□ -0.14
SPTB-208ENST00000556626 LAS1LQ9Y4W2 734 aaKnown RBP14.15□□□□□ -0.14
SPTB-208ENST00000556626 MSNP26038 577 aaKnown RBP14.14□□□□□ -0.15
SPTB-208ENST00000556626 FBLN2P98095 1184 aa14.14□□□□□ -0.15
SPTB-208ENST00000556626 L1TD1Q5T7N2 865 aaKnown RBP14.12□□□□□ -0.15
SPTB-208ENST00000556626 ARID3CA6NKF2 412 aa14.12□□□□□ -0.15
SPTB-208ENST00000556626 DEKP35659 375 aaKnown RBP14.12□□□□□ -0.15
SPTB-208ENST00000556626 SUPT16HQ9Y5B9 1047 aaKnown RBP14.12□□□□□ -0.15
SPTB-208ENST00000556626 EIF4G2P78344 907 aaKnown RBP eCLIP14.11□□□□□ -0.152e-8■■■■■ 33.5
SPTB-208ENST00000556626 NRDCO43847 1150 aa14.11□□□□□ -0.15
SPTB-208ENST00000556626 FTSJ3Q8IY81 847 aaKnown RBP14.1□□□□□ -0.15
SPTB-208ENST00000556626 PPP4R2Q9NY27 417 aa14.09□□□□□ -0.15
SPTB-208ENST00000556626 STAG3Q9UJ98 1225 aa14.08□□□□□ -0.15
SPTB-208ENST00000556626 PRKCSHP14314 528 aaPredicted RBP14.06□□□□□ -0.16
SPTB-208ENST00000556626 ESF1Q9H501 851 aaKnown RBP14.06□□□□□ -0.16
SPTB-208ENST00000556626 HSP90AB1P08238 724 aaKnown RBP14.05□□□□□ -0.16
SPTB-208ENST00000556626 CHGAP10645 457 aaKnown RBP14.04□□□□□ -0.16
SPTB-208ENST00000556626 PLCB2Q00722 1185 aa14.03□□□□□ -0.16
SPTB-208ENST00000556626 TPRNQ4KMQ1 711 aa14.02□□□□□ -0.16
SPTB-208ENST00000556626 AMER1Q5JTC6 1135 aaPredicted RBP14.02□□□□□ -0.17
SPTB-208ENST00000556626 HIRIP3Q9BW71 556 aaPredicted RBP14.02□□□□□ -0.17
SPTB-208ENST00000556626 KDM2AQ9Y2K7 1162 aa14□□□□□ -0.17
SPTB-208ENST00000556626 ABCC9O60706 1549 aa14□□□□□ -0.17
SPTB-208ENST00000556626 HSCBQ8IWL3 235 aa13.99□□□□□ -0.17
SPTB-208ENST00000556626 MTUS2Q5JR59 1369 aa13.99□□□□□ -0.17
SPTB-208ENST00000556626 CLIP1P30622 1438 aa13.98□□□□□ -0.17
SPTB-208ENST00000556626 RGS3P49796 1198 aa13.97□□□□□ -0.17
SPTB-208ENST00000556626 CHIC2Q9UKJ5 165 aa13.97□□□□□ -0.17
SPTB-208ENST00000556626 PTMSP20962 102 aa13.96□□□□□ -0.17
SPTB-208ENST00000556626 CHMP4BQ9H444 224 aaKnown RBP13.96□□□□□ -0.17
SPTB-208ENST00000556626 PABPN1Q86U42 306 aaKnown RBP eCLIP13.96□□□□□ -0.18
SPTB-208ENST00000556626 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.95□□□□□ -0.186e-6■□□□□ 8.3
SPTB-208ENST00000556626 DRC7Q8IY82 874 aa13.94□□□□□ -0.18
SPTB-208ENST00000556626 KNSTRNQ9Y448 316 aa13.94□□□□□ -0.18
SPTB-208ENST00000556626 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.94□□□□□ -0.18
SPTB-208ENST00000556626 RBM19Q9Y4C8 960 aaKnown RBP13.94□□□□□ -0.18
SPTB-208ENST00000556626 CFAP53Q96M91 514 aa13.94□□□□□ -0.18
SPTB-208ENST00000556626 MYO15BQ96JP2 1530 aa13.94□□□□□ -0.18
SPTB-208ENST00000556626 ARID4BQ4LE39 1312 aaPredicted RBP13.94□□□□□ -0.18
SPTB-208ENST00000556626 TNNT3P45378 269 aaPredicted RBP13.92□□□□□ -0.18
SPTB-208ENST00000556626 CDCA8Q53HL2 280 aa13.92□□□□□ -0.18
SPTB-208ENST00000556626 B4GALNT3Q6L9W6 998 aa13.92□□□□□ -0.18
SPTB-208ENST00000556626 GOLGA6L4A6NEF3 574 aa13.91□□□□□ -0.18
SPTB-208ENST00000556626 PNNQ9H307 717 aaKnown RBP13.91□□□□□ -0.18
SPTB-208ENST00000556626 GOLGA3Q08378 1498 aa13.91□□□□□ -0.18
SPTB-208ENST00000556626 MS4A1P11836 297 aa13.91□□□□□ -0.18
SPTB-208ENST00000556626 KIAA2012Q0VF49 1180 aa13.9□□□□□ -0.18
SPTB-208ENST00000556626 CEP162Q5TB80 1403 aa13.88□□□□□ -0.19
SPTB-208ENST00000556626 RSF1Q96T23 1441 aaPredicted RBP13.88□□□□□ -0.19
SPTB-208ENST00000556626 TSPY4P0CV99 314 aa13.88□□□□□ -0.19
SPTB-208ENST00000556626 TSPY10P0CW01 314 aa13.88□□□□□ -0.19
SPTB-208ENST00000556626 CFAP44Q96MT7 982 aa13.88□□□□□ -0.19
SPTB-208ENST00000556626 FGD1P98174 961 aa13.87□□□□□ -0.19
SPTB-208ENST00000556626 GBP4Q96PP9 640 aa13.87□□□□□ -0.19
SPTB-208ENST00000556626 MCCP23508 829 aa13.86□□□□□ -0.19
SPTB-208ENST00000556626 ZCCHC6Q5VYS8 1495 aaKnown RBP13.85□□□□□ -0.19
SPTB-208ENST00000556626 RSPH6AQ9H0K4 717 aa13.84□□□□□ -0.19
SPTB-208ENST00000556626 KCNJ4P48050 445 aa13.84□□□□□ -0.19
SPTB-208ENST00000556626 FRAT1Q92837 279 aaPredicted RBP13.83□□□□□ -0.19
SPTB-208ENST00000556626 EEA1Q15075 1411 aa13.83□□□□□ -0.2
SPTB-208ENST00000556626 HSP90AA2PQ14568 343 aaPredicted RBP13.83□□□□□ -0.2
SPTB-208ENST00000556626 MAPK8IP3Q9UPT6 1336 aa13.83□□□□□ -0.2
SPTB-208ENST00000556626 SYAP1Q96A49 352 aaPredicted RBP13.83□□□□□ -0.2
SPTB-208ENST00000556626 ARID3AQ99856 593 aa13.83□□□□□ -0.2
SPTB-208ENST00000556626 TULP1O00294 542 aaPredicted RBP13.81□□□□□ -0.2
SPTB-208ENST00000556626 SPRYD3Q8NCJ5 442 aa13.8□□□□□ -0.2
SPTB-208ENST00000556626 GOLGA6L1Q8N7Z2 621 aa13.8□□□□□ -0.2
SPTB-208ENST00000556626 RRP7BPQ9NSQ0 103 aa13.79□□□□□ -0.2
SPTB-208ENST00000556626 SENP3-EIF4A1A0A087X0R7 540 aa13.78□□□□□ -0.2
SPTB-208ENST00000556626 GOLGA6L3A6NEY3 463 aa13.78□□□□□ -0.2
SPTB-208ENST00000556626 GZF1Q9H116 711 aaPredicted RBP13.78□□□□□ -0.2
SPTB-208ENST00000556626 NOC3LQ8WTT2 800 aaKnown RBP13.78□□□□□ -0.2
SPTB-208ENST00000556626 OS9Q13438 667 aaPredicted RBP13.78□□□□□ -0.2
SPTB-208ENST00000556626 NAP1L2Q9ULW6 460 aaPredicted RBP13.77□□□□□ -0.2
SPTB-208ENST00000556626 PKNOX2Q96KN3 472 aa13.77□□□□□ -0.2
SPTB-208ENST00000556626 CARD11Q9BXL7 1154 aa13.77□□□□□ -0.21
SPTB-208ENST00000556626 USP35Q9P2H5 1018 aa13.76□□□□□ -0.21
SPTB-208ENST00000556626 NUDCQ9Y266 331 aa13.76□□□□□ -0.21
SPTB-208ENST00000556626 CCER2I3L3R5 266 aa13.75□□□□□ -0.21
SPTB-208ENST00000556626 NEUROD2Q15784 382 aa13.75□□□□□ -0.21
SPTB-208ENST00000556626 IPO9Q96P70 1041 aaKnown RBP13.75□□□□□ -0.21
SPTB-208ENST00000556626 TAOK2Q9UL54 1235 aa13.74□□□□□ -0.21
SPTB-208ENST00000556626 A0A0G2JS52 829 aa13.74□□□□□ -0.21
SPTB-208ENST00000556626 PHF14O94880 888 aa13.74□□□□□ -0.21
SPTB-208ENST00000556626 C14orf37Q86TY3 774 aa13.73□□□□□ -0.21
SPTB-208ENST00000556626 ZBTB7CA1YPR0 619 aa13.73□□□□□ -0.21
SPTB-208ENST00000556626 TCERG1O14776 1098 aaKnown RBP13.72□□□□□ -0.21
SPTB-208ENST00000556626 CEP164Q9UPV0 1460 aa13.72□□□□□ -0.21
SPTB-208ENST00000556626 GNL2Q13823 731 aaKnown RBP13.72□□□□□ -0.21
SPTB-208ENST00000556626 SETQ01105 290 aaPredicted RBP13.72□□□□□ -0.21
SPTB-208ENST00000556626 PLPPR3Q6T4P5 718 aa13.71□□□□□ -0.21
SPTB-208ENST00000556626 SLKQ9H2G2 1235 aaPredicted RBP13.7□□□□□ -0.22
SPTB-208ENST00000556626 NPM1P06748 294 aaKnown RBP eCLIP13.7□□□□□ -0.22
SPTB-208ENST00000556626 HTATSF1O43719 755 aaKnown RBP13.7□□□□□ -0.22
SPTB-208ENST00000556626 TPM4P67936 248 aa13.69□□□□□ -0.22
SPTB-208ENST00000556626 PODXL2Q9NZ53 605 aa13.69□□□□□ -0.22
SPTB-208ENST00000556626 CC2D1BQ5T0F9 858 aaKnown RBP13.69□□□□□ -0.22
SPTB-208ENST00000556626 PPP1R15AO75807 674 aaPredicted RBP13.68□□□□□ -0.22
SPTB-208ENST00000556626 KIAA1211Q6ZU35 1233 aa13.68□□□□□ -0.22
SPTB-208ENST00000556626 RGL3Q3MIN7 710 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms