RNA–Protein interactions for RNA: ENST00000556283.1

PAPOLA-219, Transcript of poly(A) polymerase alpha, humanhuman

TSL 3

Gene PAPOLA, Length 644 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPOLA-219ENST00000556283 CHRDL2Q6WN34 429 aa12.35□□□□□ -0.43
PAPOLA-219ENST00000556283 RBM42Q9BTD8 480 aaKnown RBP12.35□□□□□ -0.43
PAPOLA-219ENST00000556283 RNF25Q96BH1 459 aaPredicted RBP12.33□□□□□ -0.44
PAPOLA-219ENST00000556283 SP7Q8TDD2 431 aaPredicted RBP12.3□□□□□ -0.44
PAPOLA-219ENST00000556283 NKX1-1Q15270 411 aaPredicted RBP12.28□□□□□ -0.44
PAPOLA-219ENST00000556283 GSE1Q14687 1217 aa12.24□□□□□ -0.45
PAPOLA-219ENST00000556283 GTPBP6O43824 516 aaPredicted RBP12.23□□□□□ -0.45
PAPOLA-219ENST00000556283 TIMELESSQ9UNS1 1208 aa12.22□□□□□ -0.45
PAPOLA-219ENST00000556283 RIOK3O14730 519 aaKnown RBP12.19□□□□□ -0.46
PAPOLA-219ENST00000556283 NUBP1P53384 320 aa12.19□□□□□ -0.46
PAPOLA-219ENST00000556283 TULP1O00294 542 aaPredicted RBP12.18□□□□□ -0.46
PAPOLA-219ENST00000556283 DCAF8Q5TAQ9 597 aa12.15□□□□□ -0.46
PAPOLA-219ENST00000556283 STK25O00506 426 aa12.13□□□□□ -0.47
PAPOLA-219ENST00000556283 GTF3C3Q9Y5Q9 886 aa12.13□□□□□ -0.47
PAPOLA-219ENST00000556283 NISCHQ9Y2I1 1504 aa12.08□□□□□ -0.48
PAPOLA-219ENST00000556283 VGFO15240 615 aaPredicted RBP12.08□□□□□ -0.48
PAPOLA-219ENST00000556283 FAM212AQ96EL1 285 aa12.03□□□□□ -0.48
PAPOLA-219ENST00000556283 BCL11BQ9C0K0 894 aaPredicted RBP12.02□□□□□ -0.49
PAPOLA-219ENST00000556283 STK24Q9Y6E0 443 aa12.02□□□□□ -0.49
PAPOLA-219ENST00000556283 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12□□□□□ -0.49
PAPOLA-219ENST00000556283 CHRM1P11229 460 aaPredicted RBP12□□□□□ -0.49
PAPOLA-219ENST00000556283 ZFP91Q96JP5 570 aaPredicted RBP12□□□□□ -0.49
PAPOLA-219ENST00000556283 SGIP1Q9BQI5 828 aa11.99□□□□□ -0.49
PAPOLA-219ENST00000556283 TMEM132AQ24JP5 1023 aa11.98□□□□□ -0.49
PAPOLA-219ENST00000556283 MNX1P50219 401 aaPredicted RBP11.97□□□□□ -0.49
PAPOLA-219ENST00000556283 CREBZFQ9NS37 354 aa11.97□□□□□ -0.49
PAPOLA-219ENST00000556283 RYDENQ9NUL5 291 aaKnown RBP11.96□□□□□ -0.49
PAPOLA-219ENST00000556283 RASEFQ8IZ41 740 aa11.95□□□□□ -0.5
PAPOLA-219ENST00000556283 SPDYE1Q8NFV5 336 aaPredicted RBP11.93□□□□□ -0.5
PAPOLA-219ENST00000556283 ERICH6Q7L0X2 663 aa11.92□□□□□ -0.5
PAPOLA-219ENST00000556283 P3H3Q8IVL6 736 aa11.92□□□□□ -0.5
PAPOLA-219ENST00000556283 PYGBP11216 843 aa11.9□□□□□ -0.5
PAPOLA-219ENST00000556283 HAX1O00165 279 aa11.89□□□□□ -0.51
PAPOLA-219ENST00000556283 CLEC11AQ9Y240 323 aa11.89□□□□□ -0.51
PAPOLA-219ENST00000556283 PRR29P0C7W0 189 aa11.88□□□□□ -0.51
PAPOLA-219ENST00000556283 PIP4P2Q8N4L2 257 aa11.88□□□□□ -0.51
PAPOLA-219ENST00000556283 AKT1S1Q96B36 256 aa11.88□□□□□ -0.51
PAPOLA-219ENST00000556283 CADPS2Q86UW7 1296 aa11.86□□□□□ -0.51
PAPOLA-219ENST00000556283 KCNV2Q8TDN2 545 aa11.86□□□□□ -0.51
PAPOLA-219ENST00000556283 LMOD2Q6P5Q4 547 aa11.85□□□□□ -0.51
PAPOLA-219ENST00000556283 ARXQ96QS3 562 aa11.85□□□□□ -0.51
PAPOLA-219ENST00000556283 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.84□□□□□ -0.51
PAPOLA-219ENST00000556283 WDR70Q9NW82 654 aa11.83□□□□□ -0.52
PAPOLA-219ENST00000556283 C14orf37Q86TY3 774 aa11.8□□□□□ -0.52
PAPOLA-219ENST00000556283 REM2Q8IYK8 340 aaPredicted RBP11.76□□□□□ -0.53
PAPOLA-219ENST00000556283 BRPF1P55201 1214 aaPredicted RBP11.74□□□□□ -0.53
PAPOLA-219ENST00000556283 ZNF467Q7Z7K2 595 aaPredicted RBP11.69□□□□□ -0.54
PAPOLA-219ENST00000556283 FXR2P51116 673 aaKnown RBP eCLIP11.68□□□□□ -0.54
PAPOLA-219ENST00000556283 PDAP1Q13442 181 aaKnown RBP11.66□□□□□ -0.54
PAPOLA-219ENST00000556283 ZC3H15Q8WU90 426 aaKnown RBP11.66□□□□□ -0.54
PAPOLA-219ENST00000556283 MFRPQ9BY79 579 aa11.66□□□□□ -0.54
PAPOLA-219ENST00000556283 DAXXQ9UER7 740 aaPredicted RBP11.66□□□□□ -0.54
PAPOLA-219ENST00000556283 PCDHB8Q9UN66 801 aa11.65□□□□□ -0.54
PAPOLA-219ENST00000556283 PCDHB13Q9Y5F0 798 aa11.65□□□□□ -0.54
PAPOLA-219ENST00000556283 PITPNM1O00562 1244 aa11.64□□□□□ -0.55
PAPOLA-219ENST00000556283 TSPYL2Q9H2G4 693 aaPredicted RBP11.64□□□□□ -0.55
PAPOLA-219ENST00000556283 EVX2Q03828 476 aa11.63□□□□□ -0.55
PAPOLA-219ENST00000556283 HOMEZQ8IX15 550 aa11.63□□□□□ -0.55
PAPOLA-219ENST00000556283 ARHGEF1Q92888 912 aaKnown RBP11.63□□□□□ -0.55
PAPOLA-219ENST00000556283 NEUROD2Q15784 382 aa11.61□□□□□ -0.55
PAPOLA-219ENST00000556283 PPP1R37O75864 691 aa11.6□□□□□ -0.55
PAPOLA-219ENST00000556283 E2F4Q16254 413 aa11.59□□□□□ -0.55
PAPOLA-219ENST00000556283 SLC24A3Q9HC58 644 aa11.59□□□□□ -0.55
PAPOLA-219ENST00000556283 SEMA3EO15041 775 aa11.58□□□□□ -0.56
PAPOLA-219ENST00000556283 PSEN1P49768 467 aa11.58□□□□□ -0.56
PAPOLA-219ENST00000556283 TESPA1A2RU30 521 aaPredicted RBP11.57□□□□□ -0.56
PAPOLA-219ENST00000556283 CHADLQ6NUI6 762 aa11.54□□□□□ -0.56
PAPOLA-219ENST00000556283 LHX8Q68G74 356 aa11.52□□□□□ -0.57
PAPOLA-219ENST00000556283 ZNF579Q8NAF0 562 aaKnown RBP11.52□□□□□ -0.57
PAPOLA-219ENST00000556283 FBXO22Q8NEZ5 403 aa11.52□□□□□ -0.57
PAPOLA-219ENST00000556283 SUPT5HO00267 1087 aaKnown RBP11.5□□□□□ -0.57
PAPOLA-219ENST00000556283 EFCAB3Q8N7B9 438 aa11.49□□□□□ -0.57
PAPOLA-219ENST00000556283 CCDC61Q9Y6R9 512 aa11.49□□□□□ -0.57
PAPOLA-219ENST00000556283 NLRP6P59044 892 aa11.48□□□□□ -0.57
PAPOLA-219ENST00000556283 PHF8Q9UPP1 1060 aa11.48□□□□□ -0.57
PAPOLA-219ENST00000556283 ZMYND10O75800 440 aa11.47□□□□□ -0.57
PAPOLA-219ENST00000556283 FARP1Q9Y4F1 1045 aaPredicted RBP11.47□□□□□ -0.57
PAPOLA-219ENST00000556283 NCKAP5LQ9HCH0 1330 aa11.45□□□□□ -0.58
PAPOLA-219ENST00000556283 CABP2Q9NPB3 220 aa11.45□□□□□ -0.58
PAPOLA-219ENST00000556283 PLSCR2Q9NRY7 297 aa11.44□□□□□ -0.58
PAPOLA-219ENST00000556283 SOX12O15370 315 aa11.43□□□□□ -0.58
PAPOLA-219ENST00000556283 IFNL1Q8IU54 200 aa11.43□□□□□ -0.58
PAPOLA-219ENST00000556283 LARP6Q9BRS8 491 aaKnown RBP11.42□□□□□ -0.58
PAPOLA-219ENST00000556283 SMYD5Q6GMV2 418 aa11.41□□□□□ -0.58
PAPOLA-219ENST00000556283 BARGINQ6ZT62 677 aa11.39□□□□□ -0.59
PAPOLA-219ENST00000556283 PDE4AP27815 886 aa11.38□□□□□ -0.59
PAPOLA-219ENST00000556283 MFSD10Q14728 455 aa11.37□□□□□ -0.59
PAPOLA-219ENST00000556283 MAP3K13O43283 966 aa11.36□□□□□ -0.59
PAPOLA-219ENST00000556283 GABBR2O75899 941 aa11.36□□□□□ -0.59
PAPOLA-219ENST00000556283 PRKAR2AP13861 404 aaKnown RBP11.35□□□□□ -0.59
PAPOLA-219ENST00000556283 ARIH1Q9Y4X5 557 aaPredicted RBP11.35□□□□□ -0.59
PAPOLA-219ENST00000556283 C19orf67A6NJJ6 358 aa11.34□□□□□ -0.59
PAPOLA-219ENST00000556283 MS4A4AQ96JQ5 239 aa11.34□□□□□ -0.59
PAPOLA-219ENST00000556283 CRISPLD2Q9H0B8 497 aa11.34□□□□□ -0.59
PAPOLA-219ENST00000556283 DDX27Q96GQ7 796 aaKnown RBP11.33□□□□□ -0.6
PAPOLA-219ENST00000556283 GPBP1L1Q9HC44 474 aaPredicted RBP11.33□□□□□ -0.6
PAPOLA-219ENST00000556283 KIF12Q96FN5 646 aa11.32□□□□□ -0.6
PAPOLA-219ENST00000556283 AK7Q96M32 723 aa11.31□□□□□ -0.6
PAPOLA-219ENST00000556283 CAMK2BQ13554 666 aa11.3□□□□□ -0.6
PAPOLA-219ENST00000556283 RBM26Q5T8P6 1007 aaKnown RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms