RNA–Protein interactions for RNA: ENST00000555658.5

FOXN3-210, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 648 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-210ENST00000555658 CCDC61Q9Y6R9 512 aa10.85□□□□□ -0.67
FOXN3-210ENST00000555658 MS4A3Q96HJ5 214 aa10.84□□□□□ -0.67
FOXN3-210ENST00000555658 RASEFQ8IZ41 740 aa10.83□□□□□ -0.68
FOXN3-210ENST00000555658 FAM212AQ96EL1 285 aa10.8□□□□□ -0.68
FOXN3-210ENST00000555658 KIF12Q96FN5 646 aa10.79□□□□□ -0.68
FOXN3-210ENST00000555658 NUBP1P53384 320 aa10.75□□□□□ -0.69
FOXN3-210ENST00000555658 KLHL34Q8N239 644 aa10.75□□□□□ -0.69
FOXN3-210ENST00000555658 MAP3K13O43283 966 aa10.74□□□□□ -0.69
FOXN3-210ENST00000555658 ASTLQ6HA08 431 aaPredicted RBP10.74□□□□□ -0.69
FOXN3-210ENST00000555658 SLC39A7Q92504 469 aa10.73□□□□□ -0.69
FOXN3-210ENST00000555658 ATMINO43313 823 aaPredicted RBP10.72□□□□□ -0.69
FOXN3-210ENST00000555658 VASPP50552 380 aaPredicted RBP10.72□□□□□ -0.69
FOXN3-210ENST00000555658 C7P10643 843 aa10.71□□□□□ -0.69
FOXN3-210ENST00000555658 DCAF8Q5TAQ9 597 aa10.71□□□□□ -0.69
FOXN3-210ENST00000555658 PCDHB13Q9Y5F0 798 aa10.7□□□□□ -0.7
FOXN3-210ENST00000555658 SGIP1Q9BQI5 828 aa10.69□□□□□ -0.7
FOXN3-210ENST00000555658 METRNQ9UJH8 293 aa10.69□□□□□ -0.7
FOXN3-210ENST00000555658 PELP1Q8IZL8 1130 aaKnown RBP10.68□□□□□ -0.7
FOXN3-210ENST00000555658 TIE1P35590 1138 aa10.67□□□□□ -0.7
FOXN3-210ENST00000555658 ATN1P54259 1190 aaPredicted RBP10.65□□□□□ -0.7
FOXN3-210ENST00000555658 BMP2KQ9NSY1 1161 aaPredicted RBP10.64□□□□□ -0.71
FOXN3-210ENST00000555658 GSE1Q14687 1217 aa10.61□□□□□ -0.71
FOXN3-210ENST00000555658 TRPC6Q9Y210 931 aa10.6□□□□□ -0.71
FOXN3-210ENST00000555658 TTLL13PA6NNM8 815 aa10.59□□□□□ -0.71
FOXN3-210ENST00000555658 SEC24BO95487 1268 aa10.59□□□□□ -0.71
FOXN3-210ENST00000555658 MAMSTRQ6ZN01 415 aa10.59□□□□□ -0.71
FOXN3-210ENST00000555658 IFNL1Q8IU54 200 aa10.59□□□□□ -0.71
FOXN3-210ENST00000555658 PYGBP11216 843 aa10.58□□□□□ -0.72
FOXN3-210ENST00000555658 POTEB2H3BUK9 544 aa10.56□□□□□ -0.72
FOXN3-210ENST00000555658 OTUD5Q96G74 571 aa10.55□□□□□ -0.72
FOXN3-210ENST00000555658 TMEM106CQ9BVX2 250 aa10.55□□□□□ -0.72
FOXN3-210ENST00000555658 TRIM35Q9UPQ4 493 aa10.54□□□□□ -0.72
FOXN3-210ENST00000555658 SPOCK2Q92563 424 aa10.53□□□□□ -0.72
FOXN3-210ENST00000555658 SCUBE2Q9NQ36 999 aa10.53□□□□□ -0.72
FOXN3-210ENST00000555658 IER5LQ5T953 404 aa10.52□□□□□ -0.73
FOXN3-210ENST00000555658 ZNF467Q7Z7K2 595 aaPredicted RBP10.49□□□□□ -0.73
FOXN3-210ENST00000555658 CIZ1Q9ULV3 898 aaPredicted RBP10.49□□□□□ -0.73
FOXN3-210ENST00000555658 PCDHB8Q9UN66 801 aa10.48□□□□□ -0.73
FOXN3-210ENST00000555658 IFNLR1Q8IU57 520 aaPredicted RBP10.47□□□□□ -0.73
FOXN3-210ENST00000555658 PLCG2P16885 1265 aa10.45□□□□□ -0.74
FOXN3-210ENST00000555658 CHRM1P11229 460 aaPredicted RBP10.44□□□□□ -0.74
FOXN3-210ENST00000555658 GOLGA2Q08379 1002 aa10.44□□□□□ -0.74
FOXN3-210ENST00000555658 COLQQ9Y215 455 aaPredicted RBP10.43□□□□□ -0.74
FOXN3-210ENST00000555658 POTEFA5A3E0 1075 aa10.41□□□□□ -0.74
FOXN3-210ENST00000555658 POTEJP0CG39 1038 aa10.41□□□□□ -0.74
FOXN3-210ENST00000555658 MKRN3Q13064 507 aaKnown RBP10.37□□□□□ -0.75
FOXN3-210ENST00000555658 OCEL1Q9H607 264 aa10.37□□□□□ -0.75
FOXN3-210ENST00000555658 PSEN1P49768 467 aa10.36□□□□□ -0.75
FOXN3-210ENST00000555658 TRIM41Q8WV44 630 aa10.35□□□□□ -0.75
FOXN3-210ENST00000555658 IRX5P78411 483 aaPredicted RBP10.34□□□□□ -0.75
FOXN3-210ENST00000555658 PDAP1Q13442 181 aaKnown RBP10.34□□□□□ -0.75
FOXN3-210ENST00000555658 FAM163AQ96GL9 167 aaPredicted RBP10.31□□□□□ -0.76
FOXN3-210ENST00000555658 SLAIN1Q8ND83 568 aa10.29□□□□□ -0.76
FOXN3-210ENST00000555658 POTEMA6NI47 508 aa10.28□□□□□ -0.76
FOXN3-210ENST00000555658 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.27□□□□□ -0.771e-6■□□□□ 8.4
FOXN3-210ENST00000555658 POTEGQ6S5H5 508 aa10.26□□□□□ -0.77
FOXN3-210ENST00000555658 L3MBTL3Q96JM7 780 aaPredicted RBP10.25□□□□□ -0.77
FOXN3-210ENST00000555658 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.25□□□□□ -0.77
FOXN3-210ENST00000555658 CABP2Q9NPB3 220 aa10.24□□□□□ -0.77
FOXN3-210ENST00000555658 G3V3G9 751 aa10.22□□□□□ -0.77
FOXN3-210ENST00000555658 C3orf67Q6ZVT6 689 aa10.22□□□□□ -0.77
FOXN3-210ENST00000555658 PDCD7Q8N8D1 485 aaKnown RBP10.19□□□□□ -0.78
FOXN3-210ENST00000555658 PLSCR2Q9NRY7 297 aa10.19□□□□□ -0.78
FOXN3-210ENST00000555658 SNPHO15079 494 aa10.18□□□□□ -0.78
FOXN3-210ENST00000555658 RIOK3O14730 519 aaKnown RBP10.17□□□□□ -0.78
FOXN3-210ENST00000555658 PCDH10Q9P2E7 1040 aa10.17□□□□□ -0.78
FOXN3-210ENST00000555658 TAOK2Q9UL54 1235 aa10.16□□□□□ -0.78
FOXN3-210ENST00000555658 VGFO15240 615 aaPredicted RBP10.13□□□□□ -0.79
FOXN3-210ENST00000555658 LCE2DQ5TA82 110 aaPredicted RBP10.11□□□□□ -0.79
FOXN3-210ENST00000555658 EFCAB3Q8N7B9 438 aa10.09□□□□□ -0.79
FOXN3-210ENST00000555658 BOLA1Q9Y3E2 137 aa10.09□□□□□ -0.79
FOXN3-210ENST00000555658 ST18O60284 1047 aa10.08□□□□□ -0.8
FOXN3-210ENST00000555658 ILDR1Q86SU0 546 aaPredicted RBP10.08□□□□□ -0.8
FOXN3-210ENST00000555658 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.07□□□□□ -0.8
FOXN3-210ENST00000555658 DPY19L2Q6NUT2 758 aa10.07□□□□□ -0.8
FOXN3-210ENST00000555658 ZFP91Q96JP5 570 aaPredicted RBP10.07□□□□□ -0.8
FOXN3-210ENST00000555658 TMEM121BQ9BXQ6 578 aaPredicted RBP10.06□□□□□ -0.8
FOXN3-210ENST00000555658 SOX12O15370 315 aa10.05□□□□□ -0.8
FOXN3-210ENST00000555658 ECM2O94769 699 aaPredicted RBP10.05□□□□□ -0.8
FOXN3-210ENST00000555658 RNF25Q96BH1 459 aaPredicted RBP10.05□□□□□ -0.8
FOXN3-210ENST00000555658 CDAN1Q8IWY9 1227 aa10□□□□□ -0.81
FOXN3-210ENST00000555658 BCL11BQ9C0K0 894 aaPredicted RBP10□□□□□ -0.81
FOXN3-210ENST00000555658 STK24Q9Y6E0 443 aa9.99□□□□□ -0.81
FOXN3-210ENST00000555658 STK25O00506 426 aa9.97□□□□□ -0.81
FOXN3-210ENST00000555658 NLRP6P59044 892 aa9.96□□□□□ -0.82
FOXN3-210ENST00000555658 EMP3P54852 163 aa9.95□□□□□ -0.82
FOXN3-210ENST00000555658 MARVELD3Q96A59 401 aa9.95□□□□□ -0.82
FOXN3-210ENST00000555658 PHF8Q9UPP1 1060 aa9.95□□□□□ -0.82
FOXN3-210ENST00000555658 ZNF710Q8N1W2 664 aa9.94□□□□□ -0.82
FOXN3-210ENST00000555658 DOK7Q18PE1 504 aa9.93□□□□□ -0.82
FOXN3-210ENST00000555658 MICALL2Q8IY33 904 aa9.93□□□□□ -0.82
FOXN3-210ENST00000555658 RIMBP2O15034 1052 aa9.92□□□□□ -0.82
FOXN3-210ENST00000555658 PKD2Q13563 968 aa9.91□□□□□ -0.82
FOXN3-210ENST00000555658 RGL2O15211 777 aa9.89□□□□□ -0.83
FOXN3-210ENST00000555658 MS4A4AQ96JQ5 239 aa9.88□□□□□ -0.83
FOXN3-210ENST00000555658 FAM205CA6NFA0 338 aa9.84□□□□□ -0.83
FOXN3-210ENST00000555658 HOXB3P14651 431 aaPredicted RBP9.84□□□□□ -0.83
FOXN3-210ENST00000555658 FBXO22Q8NEZ5 403 aa9.83□□□□□ -0.84
FOXN3-210ENST00000555658 MFRPQ9BY79 579 aa9.82□□□□□ -0.84
FOXN3-210ENST00000555658 HS3ST6Q96QI5 342 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms