RNA–Protein interactions for RNA: ENST00000555658.5

FOXN3-210, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 648 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-210ENST00000555658 SF3B1O75533 1304 aaKnown RBP eCLIP4.28□□□□□ -1.723e-6■■■■■ 137.9
FOXN3-210ENST00000555658 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.78□□□□□ -1.321e-7■■■■■ 115.4
FOXN3-210ENST00000555658 SF3B4Q15427 424 aaKnown RBP eCLIP3.78□□□□□ -1.88e-18■■■■■ 59.1
FOXN3-210ENST00000555658 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.16□□□□□ -1.742e-6■■■■■ 46.4
FOXN3-210ENST00000555658 RBFOX2O43251 390 aaKnown RBP eCLIP3.3□□□□□ -1.883e-9■■■■■ 45.5
FOXN3-210ENST00000555658 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.05□□□□□ -1.764e-6■■■■■ 41.2
FOXN3-210ENST00000555658 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.42□□□□□ -1.862e-6■■■■■ 35.4
FOXN3-210ENST00000555658 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.24□□□□□ -1.736e-8■■■■■ 34.4
FOXN3-210ENST00000555658 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.73□□□□□ -1.656e-9■■■■■ 34.3
FOXN3-210ENST00000555658 BCCIPQ9P287 314 aaKnown RBP eCLIP5.25□□□□□ -1.578e-8■■■■■ 34.1
FOXN3-210ENST00000555658 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.82□□□□□ -1.481e-6■■■■■ 33.8
FOXN3-210ENST00000555658 DKC1O60832 514 aaKnown RBP eCLIP4.53□□□□□ -1.684e-13■■■■■ 32.2
FOXN3-210ENST00000555658 SRSF9Q13242 221 aaKnown RBP eCLIP2.82□□□□□ -1.963e-8■■■■□ 26.7
FOXN3-210ENST00000555658 PCBP2Q15366 365 aaKnown RBP eCLIP3.94□□□□□ -1.782e-6■■■■□ 25.4
FOXN3-210ENST00000555658 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.33□□□□□ -1.727e-6■■■■□ 24.5
FOXN3-210ENST00000555658 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.57□□□□□ -1.523e-12■■■■□ 24
FOXN3-210ENST00000555658 KHSRPQ92945 711 aaKnown RBP eCLIP9.59□□□□□ -0.872e-6■■■■□ 23
FOXN3-210ENST00000555658 SRSF7Q16629 238 aaKnown RBP eCLIP4.18□□□□□ -1.742e-6■■■■□ 20.1
FOXN3-210ENST00000555658 MATR3P43243 847 aaKnown RBP eCLIP4.42□□□□□ -1.73e-7■■■□□ 19
FOXN3-210ENST00000555658 HNRNPMP52272 730 aaKnown RBP eCLIP6.01□□□□□ -1.456e-7■■■□□ 18.1
FOXN3-210ENST00000555658 PTBP1P26599 531 aaKnown RBP eCLIP3.69□□□□□ -1.822e-7■■■□□ 17.8
FOXN3-210ENST00000555658 TIAL1Q01085 375 aaKnown RBP eCLIP3.97□□□□□ -1.778e-7■■■□□ 17
FOXN3-210ENST00000555658 GTF2F1P35269 517 aaKnown RBP eCLIP4.64□□□□□ -1.672e-6■■■□□ 16.6
FOXN3-210ENST00000555658 CSTF2P33240 577 aaKnown RBP eCLIP4.01□□□□□ -1.771e-6■■■□□ 16.5
FOXN3-210ENST00000555658 LSM11P83369 360 aaKnown RBP eCLIP9.47□□□□□ -0.895e-7■■■□□ 16.1
FOXN3-210ENST00000555658 HNRNPKP61978 463 aaKnown RBP eCLIP3.94□□□□□ -1.782e-7■■■□□ 16.1
FOXN3-210ENST00000555658 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.45□□□□□ -1.547e-8■■■□□ 15.8
FOXN3-210ENST00000555658 NKRFO15226 690 aaKnown RBP eCLIP4.88□□□□□ -1.631e-11■■■□□ 15
FOXN3-210ENST00000555658 U2AF2P26368 475 aaKnown RBP eCLIP4.64□□□□□ -1.671e-6■■□□□ 14.2
FOXN3-210ENST00000555658 HLTFQ14527 1009 aaKnown RBP eCLIP4.15□□□□□ -1.751e-6■■□□□ 13.1
FOXN3-210ENST00000555658 QKIQ96PU8 341 aaKnown RBP eCLIP4.15□□□□□ -1.753e-7■■□□□ 13.1
FOXN3-210ENST00000555658 HNRNPLP14866 589 aaKnown RBP eCLIP4.56□□□□□ -1.684e-12■■□□□ 13
FOXN3-210ENST00000555658 HNRNPCP07910 306 aaKnown RBP eCLIP4.18□□□□□ -1.743e-6■■□□□ 12.6
FOXN3-210ENST00000555658 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.23□□□□□ -1.572e-6■■□□□ 12.3
FOXN3-210ENST00000555658 RBM22Q9NW64 420 aaKnown RBP eCLIP4.13□□□□□ -1.752e-7■■□□□ 12.1
FOXN3-210ENST00000555658 PRPF4O43172 522 aaKnown RBP eCLIP4.01□□□□□ -1.774e-6■■□□□ 11.4
FOXN3-210ENST00000555658 AQRO60306 1485 aaKnown RBP eCLIP6.46□□□□□ -1.387e-7■□□□□ 11.1
FOXN3-210ENST00000555658 FUSP35637 526 aaKnown RBP eCLIP2.62□□□□□ -1.993e-8■□□□□ 10.9
FOXN3-210ENST00000555658 SFPQP23246 707 aaKnown RBP eCLIP4.41□□□□□ -1.74e-6■□□□□ 10.6
FOXN3-210ENST00000555658 CDC40O60508 579 aaKnown RBP eCLIP3.69□□□□□ -1.823e-6■□□□□ 9.5
FOXN3-210ENST00000555658 PPIGQ13427 754 aaKnown RBP eCLIP4.31□□□□□ -1.721e-8■□□□□ 8.5
FOXN3-210ENST00000555658 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.27□□□□□ -0.771e-6■□□□□ 8.4
Retrieved 42 of 42 RNA–protein pairs in 26.6 ms