RNA–Protein interactions for RNA: ENST00000555164.2

KTN1-219, Transcript of kinectin 1, humanhuman

TSL 4

Gene KTN1, Length 542 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-219ENST00000555164 CCDC61Q9Y6R9 512 aa12.9□□□□□ -0.34
KTN1-219ENST00000555164 RASEFQ8IZ41 740 aa12.88□□□□□ -0.35
KTN1-219ENST00000555164 MS4A3Q96HJ5 214 aa12.88□□□□□ -0.35
KTN1-219ENST00000555164 KIF12Q96FN5 646 aa12.8□□□□□ -0.36
KTN1-219ENST00000555164 NUBP1P53384 320 aa12.78□□□□□ -0.36
KTN1-219ENST00000555164 ASTLQ6HA08 431 aaPredicted RBP12.76□□□□□ -0.37
KTN1-219ENST00000555164 FAM212AQ96EL1 285 aa12.76□□□□□ -0.37
KTN1-219ENST00000555164 MAP3K13O43283 966 aa12.73□□□□□ -0.37
KTN1-219ENST00000555164 VASPP50552 380 aaPredicted RBP12.73□□□□□ -0.37
KTN1-219ENST00000555164 ATMINO43313 823 aaPredicted RBP12.72□□□□□ -0.37
KTN1-219ENST00000555164 PELP1Q8IZL8 1130 aaKnown RBP12.7□□□□□ -0.38
KTN1-219ENST00000555164 SLC39A7Q92504 469 aa12.67□□□□□ -0.38
KTN1-219ENST00000555164 SGIP1Q9BQI5 828 aa12.67□□□□□ -0.38
KTN1-219ENST00000555164 METRNQ9UJH8 293 aa12.67□□□□□ -0.38
KTN1-219ENST00000555164 TIE1P35590 1138 aa12.66□□□□□ -0.38
KTN1-219ENST00000555164 PCDHB13Q9Y5F0 798 aa12.65□□□□□ -0.38
KTN1-219ENST00000555164 C7P10643 843 aa12.64□□□□□ -0.39
KTN1-219ENST00000555164 ATN1P54259 1190 aaPredicted RBP12.64□□□□□ -0.39
KTN1-219ENST00000555164 BMP2KQ9NSY1 1161 aaPredicted RBP12.64□□□□□ -0.39
KTN1-219ENST00000555164 TRPC6Q9Y210 931 aa12.64□□□□□ -0.39
KTN1-219ENST00000555164 KLHL34Q8N239 644 aa12.63□□□□□ -0.39
KTN1-219ENST00000555164 DCAF8Q5TAQ9 597 aa12.61□□□□□ -0.39
KTN1-219ENST00000555164 POTEB2H3BUK9 544 aa12.57□□□□□ -0.4
KTN1-219ENST00000555164 TTLL13PA6NNM8 815 aa12.56□□□□□ -0.4
KTN1-219ENST00000555164 IFNL1Q8IU54 200 aa12.56□□□□□ -0.4
KTN1-219ENST00000555164 GSE1Q14687 1217 aa12.53□□□□□ -0.4
KTN1-219ENST00000555164 PYGBP11216 843 aa12.52□□□□□ -0.41
KTN1-219ENST00000555164 OTUD5Q96G74 571 aa12.52□□□□□ -0.41
KTN1-219ENST00000555164 TRIM35Q9UPQ4 493 aa12.49□□□□□ -0.41
KTN1-219ENST00000555164 IER5LQ5T953 404 aa12.47□□□□□ -0.41
KTN1-219ENST00000555164 MAMSTRQ6ZN01 415 aa12.47□□□□□ -0.41
KTN1-219ENST00000555164 TMEM106CQ9BVX2 250 aa12.47□□□□□ -0.41
KTN1-219ENST00000555164 IFNLR1Q8IU57 520 aaPredicted RBP12.46□□□□□ -0.41
KTN1-219ENST00000555164 SPOCK2Q92563 424 aa12.45□□□□□ -0.42
KTN1-219ENST00000555164 POTEFA5A3E0 1075 aa12.43□□□□□ -0.42
KTN1-219ENST00000555164 SEC24BO95487 1268 aa12.43□□□□□ -0.42
KTN1-219ENST00000555164 POTEJP0CG39 1038 aa12.42□□□□□ -0.42
KTN1-219ENST00000555164 ZNF467Q7Z7K2 595 aaPredicted RBP12.41□□□□□ -0.42
KTN1-219ENST00000555164 SCUBE2Q9NQ36 999 aa12.41□□□□□ -0.42
KTN1-219ENST00000555164 PCDHB8Q9UN66 801 aa12.41□□□□□ -0.42
KTN1-219ENST00000555164 CHRM1P11229 460 aaPredicted RBP12.39□□□□□ -0.43
KTN1-219ENST00000555164 COLQQ9Y215 455 aaPredicted RBP12.39□□□□□ -0.43
KTN1-219ENST00000555164 CIZ1Q9ULV3 898 aaPredicted RBP12.35□□□□□ -0.43
KTN1-219ENST00000555164 PLCG2P16885 1265 aa12.33□□□□□ -0.44
KTN1-219ENST00000555164 IRX5P78411 483 aaPredicted RBP12.29□□□□□ -0.44
KTN1-219ENST00000555164 PSEN1P49768 467 aa12.25□□□□□ -0.45
KTN1-219ENST00000555164 GOLGA2Q08379 1002 aa12.25□□□□□ -0.45
KTN1-219ENST00000555164 TRIM41Q8WV44 630 aa12.25□□□□□ -0.45
KTN1-219ENST00000555164 PDAP1Q13442 181 aaKnown RBP12.24□□□□□ -0.45
KTN1-219ENST00000555164 OCEL1Q9H607 264 aa12.24□□□□□ -0.45
KTN1-219ENST00000555164 MKRN3Q13064 507 aaKnown RBP12.21□□□□□ -0.45
KTN1-219ENST00000555164 POTEMA6NI47 508 aa12.15□□□□□ -0.46
KTN1-219ENST00000555164 PDCD7Q8N8D1 485 aaKnown RBP12.15□□□□□ -0.46
KTN1-219ENST00000555164 SLAIN1Q8ND83 568 aa12.14□□□□□ -0.47
KTN1-219ENST00000555164 POTEGQ6S5H5 508 aa12.13□□□□□ -0.47
KTN1-219ENST00000555164 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.12□□□□□ -0.474e-14■■■■□ 23.3
KTN1-219ENST00000555164 CABP2Q9NPB3 220 aa12.11□□□□□ -0.47
KTN1-219ENST00000555164 FAM163AQ96GL9 167 aaPredicted RBP12.1□□□□□ -0.47
KTN1-219ENST00000555164 LCE2DQ5TA82 110 aaPredicted RBP12.09□□□□□ -0.47
KTN1-219ENST00000555164 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.09□□□□□ -0.47
KTN1-219ENST00000555164 L3MBTL3Q96JM7 780 aaPredicted RBP12.08□□□□□ -0.48
KTN1-219ENST00000555164 C3orf67Q6ZVT6 689 aa12.05□□□□□ -0.48
KTN1-219ENST00000555164 ILDR1Q86SU0 546 aaPredicted RBP12.05□□□□□ -0.48
KTN1-219ENST00000555164 RIOK3O14730 519 aaKnown RBP12.04□□□□□ -0.48
KTN1-219ENST00000555164 RNF25Q96BH1 459 aaPredicted RBP12.02□□□□□ -0.49
KTN1-219ENST00000555164 VGFO15240 615 aaPredicted RBP11.99□□□□□ -0.49
KTN1-219ENST00000555164 PCDH10Q9P2E7 1040 aa11.98□□□□□ -0.49
KTN1-219ENST00000555164 G3V3G9 751 aa11.97□□□□□ -0.49
KTN1-219ENST00000555164 SNPHO15079 494 aa11.97□□□□□ -0.49
KTN1-219ENST00000555164 EFCAB3Q8N7B9 438 aa11.96□□□□□ -0.49
KTN1-219ENST00000555164 PLSCR2Q9NRY7 297 aa11.96□□□□□ -0.49
KTN1-219ENST00000555164 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.95□□□□□ -0.5
KTN1-219ENST00000555164 ZFP91Q96JP5 570 aaPredicted RBP11.95□□□□□ -0.5
KTN1-219ENST00000555164 ST18O60284 1047 aa11.94□□□□□ -0.5
KTN1-219ENST00000555164 DPY19L2Q6NUT2 758 aa11.94□□□□□ -0.5
KTN1-219ENST00000555164 TAOK2Q9UL54 1235 aa11.94□□□□□ -0.5
KTN1-219ENST00000555164 BOLA1Q9Y3E2 137 aa11.93□□□□□ -0.5
KTN1-219ENST00000555164 TMEM121BQ9BXQ6 578 aaPredicted RBP11.9□□□□□ -0.5
KTN1-219ENST00000555164 SOX12O15370 315 aa11.88□□□□□ -0.51
KTN1-219ENST00000555164 ECM2O94769 699 aaPredicted RBP11.88□□□□□ -0.51
KTN1-219ENST00000555164 BCL11BQ9C0K0 894 aaPredicted RBP11.84□□□□□ -0.51
KTN1-219ENST00000555164 PKD2Q13563 968 aa11.81□□□□□ -0.52
KTN1-219ENST00000555164 PHF8Q9UPP1 1060 aa11.81□□□□□ -0.52
KTN1-219ENST00000555164 CDAN1Q8IWY9 1227 aa11.8□□□□□ -0.52
KTN1-219ENST00000555164 STK24Q9Y6E0 443 aa11.8□□□□□ -0.52
KTN1-219ENST00000555164 MICALL2Q8IY33 904 aa11.79□□□□□ -0.52
KTN1-219ENST00000555164 MS4A4AQ96JQ5 239 aa11.79□□□□□ -0.52
KTN1-219ENST00000555164 STK25O00506 426 aa11.78□□□□□ -0.52
KTN1-219ENST00000555164 NLRP6P59044 892 aa11.77□□□□□ -0.53
KTN1-219ENST00000555164 RGL2O15211 777 aa11.76□□□□□ -0.53
KTN1-219ENST00000555164 MARVELD3Q96A59 401 aa11.76□□□□□ -0.53
KTN1-219ENST00000555164 EMP3P54852 163 aa11.73□□□□□ -0.53
KTN1-219ENST00000555164 FBXO22Q8NEZ5 403 aa11.72□□□□□ -0.53
KTN1-219ENST00000555164 HOXB3P14651 431 aaPredicted RBP11.71□□□□□ -0.53
KTN1-219ENST00000555164 DOK7Q18PE1 504 aa11.7□□□□□ -0.54
KTN1-219ENST00000555164 MFRPQ9BY79 579 aa11.7□□□□□ -0.54
KTN1-219ENST00000555164 TMEM92Q6UXU6 159 aa11.68□□□□□ -0.54
KTN1-219ENST00000555164 ZNF710Q8N1W2 664 aa11.68□□□□□ -0.54
KTN1-219ENST00000555164 RIMBP2O15034 1052 aa11.66□□□□□ -0.54
KTN1-219ENST00000555164 HOXB1P14653 301 aaPredicted RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms