RNA–Protein interactions for RNA: ENST00000554614.2

AC004846.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC004846.1, Length 3,050 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004846.1-201ENST00000554614 CDK11AQ9UQ88 783 aaPredicted RBP19.06■□□□□ 0.64
AC004846.1-201ENST00000554614 NBR1Q14596 966 aa19.05■□□□□ 0.64
AC004846.1-201ENST00000554614 TOP2BQ02880 1626 aa19.04■□□□□ 0.64
AC004846.1-201ENST00000554614 CNGB1Q14028 1251 aaPredicted RBP19.03■□□□□ 0.64
AC004846.1-201ENST00000554614 KIF21BO75037 1637 aa19.02■□□□□ 0.64
AC004846.1-201ENST00000554614 RAB3GAP2Q9H2M9 1393 aa19■□□□□ 0.63
AC004846.1-201ENST00000554614 CUX1P39880 1505 aa18.99■□□□□ 0.63
AC004846.1-201ENST00000554614 CADPSQ9ULU8 1353 aa18.99■□□□□ 0.63
AC004846.1-201ENST00000554614 SENP3-EIF4A1A0A087X0R7 540 aa18.97■□□□□ 0.63
AC004846.1-201ENST00000554614 CCNB3Q8WWL7 1395 aa18.96■□□□□ 0.63
AC004846.1-201ENST00000554614 DEKP35659 375 aaKnown RBP18.96■□□□□ 0.63
AC004846.1-201ENST00000554614 PPP1R15AO75807 674 aaPredicted RBP18.95■□□□□ 0.62
AC004846.1-201ENST00000554614 BIVM-ERCC5R4GMW8 1640 aa18.94■□□□□ 0.62
AC004846.1-201ENST00000554614 P3H3Q8IVL6 736 aa18.93■□□□□ 0.62
AC004846.1-201ENST00000554614 B4GALNT3Q6L9W6 998 aa18.92■□□□□ 0.62
AC004846.1-201ENST00000554614 DNAJC5BQ9UF47 199 aa18.89■□□□□ 0.61
AC004846.1-201ENST00000554614 WDR97A6NE52 1622 aa18.87■□□□□ 0.61
AC004846.1-201ENST00000554614 ARAP1Q96P48 1450 aa18.83■□□□□ 0.61
AC004846.1-201ENST00000554614 FAM9BQ8IZU0 186 aa18.83■□□□□ 0.61
AC004846.1-201ENST00000554614 NESP48681 1621 aa18.82■□□□□ 0.6
AC004846.1-201ENST00000554614 KIF27Q86VH2 1401 aa18.81■□□□□ 0.6
AC004846.1-201ENST00000554614 FANCIQ9NVI1 1328 aa18.81■□□□□ 0.6
AC004846.1-201ENST00000554614 RTN4Q9NQC3 1192 aaKnown RBP18.81■□□□□ 0.6
AC004846.1-201ENST00000554614 CCER2I3L3R5 266 aa18.81■□□□□ 0.6
AC004846.1-201ENST00000554614 ANO8Q9HCE9 1232 aaPredicted RBP18.81■□□□□ 0.6
AC004846.1-201ENST00000554614 FANCD2Q9BXW9 1451 aa18.79■□□□□ 0.6
AC004846.1-201ENST00000554614 PAK3O75914 559 aaPredicted RBP18.78■□□□□ 0.6
AC004846.1-201ENST00000554614 RRBP1Q9P2E9 1410 aaKnown RBP18.77■□□□□ 0.6
AC004846.1-201ENST00000554614 PRXQ9BXM0 1461 aa18.77■□□□□ 0.59
AC004846.1-201ENST00000554614 CCDC184Q52MB2 194 aa18.76■□□□□ 0.59
AC004846.1-201ENST00000554614 PRDM2Q13029 1718 aa18.76■□□□□ 0.59
AC004846.1-201ENST00000554614 MAPKBP1O60336 1514 aa18.76■□□□□ 0.59
AC004846.1-201ENST00000554614 SETD5Q9C0A6 1442 aa18.75■□□□□ 0.59
AC004846.1-201ENST00000554614 CUX2O14529 1486 aa18.75■□□□□ 0.59
AC004846.1-201ENST00000554614 FGD5Q6ZNL6 1462 aa18.73■□□□□ 0.59
AC004846.1-201ENST00000554614 CCDC136Q96JN2 1154 aa18.73■□□□□ 0.59
AC004846.1-201ENST00000554614 TONSLQ96HA7 1378 aa18.72■□□□□ 0.59
AC004846.1-201ENST00000554614 PPP4R2Q9NY27 417 aa18.69■□□□□ 0.58
AC004846.1-201ENST00000554614 NOP58Q9Y2X3 529 aaKnown RBP18.69■□□□□ 0.58
AC004846.1-201ENST00000554614 IGF1RP08069 1367 aa18.68■□□□□ 0.58
AC004846.1-201ENST00000554614 ERICH3Q5RHP9 1530 aa18.67■□□□□ 0.58
AC004846.1-201ENST00000554614 POLR3GLQ9BT43 218 aa18.67■□□□□ 0.58
AC004846.1-201ENST00000554614 NPM2Q86SE8 214 aaKnown RBP18.66■□□□□ 0.58
AC004846.1-201ENST00000554614 PHLDB1Q86UU1 1377 aa18.65■□□□□ 0.58
AC004846.1-201ENST00000554614 SALL2Q9Y467 1007 aaPredicted RBP18.65■□□□□ 0.58
AC004846.1-201ENST00000554614 RAD54L2Q9Y4B4 1467 aa18.63■□□□□ 0.57
AC004846.1-201ENST00000554614 RTL5Q5HYW3 569 aaPredicted RBP18.63■□□□□ 0.57
AC004846.1-201ENST00000554614 MRS2Q9HD23 443 aa18.62■□□□□ 0.57
AC004846.1-201ENST00000554614 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.62■□□□□ 0.57
AC004846.1-201ENST00000554614 IL27Q8NEV9 243 aa18.61■□□□□ 0.57
AC004846.1-201ENST00000554614 TOPBP1Q92547 1522 aa18.61■□□□□ 0.57
AC004846.1-201ENST00000554614 CARMIL1Q5VZK9 1371 aa18.59■□□□□ 0.57
AC004846.1-201ENST00000554614 ARHGAP35Q9NRY4 1499 aa18.58■□□□□ 0.56
AC004846.1-201ENST00000554614 POLA1P09884 1462 aaPredicted RBP18.58■□□□□ 0.56
AC004846.1-201ENST00000554614 DNMBPQ6XZF7 1577 aa18.58■□□□□ 0.56
AC004846.1-201ENST00000554614 HSPA5P11021 654 aaKnown RBP18.57■□□□□ 0.56
AC004846.1-201ENST00000554614 LAMC3Q9Y6N6 1575 aa18.56■□□□□ 0.56
AC004846.1-201ENST00000554614 CHIC2Q9UKJ5 165 aa18.55■□□□□ 0.56
AC004846.1-201ENST00000554614 LAS1LQ9Y4W2 734 aaKnown RBP18.55■□□□□ 0.56
AC004846.1-201ENST00000554614 WASHC2AQ641Q2 1341 aa18.54■□□□□ 0.56
AC004846.1-201ENST00000554614 URB2Q14146 1524 aaKnown RBP18.53■□□□□ 0.56
AC004846.1-201ENST00000554614 ANP32AP39687 249 aaKnown RBP18.53■□□□□ 0.56
AC004846.1-201ENST00000554614 PDS5BQ9NTI5 1447 aa18.52■□□□□ 0.56
AC004846.1-201ENST00000554614 ZBTB47Q9UFB7 747 aaPredicted RBP18.52■□□□□ 0.56
AC004846.1-201ENST00000554614 FOXD1Q16676 465 aa18.51■□□□□ 0.55
AC004846.1-201ENST00000554614 RRP7BPQ9NSQ0 103 aa18.5■□□□□ 0.55
AC004846.1-201ENST00000554614 MYT1LQ9UL68 1186 aa18.5■□□□□ 0.55
AC004846.1-201ENST00000554614 ABCA10Q8WWZ4 1543 aa18.48■□□□□ 0.55
AC004846.1-201ENST00000554614 TDRD9Q8NDG6 1382 aaKnown RBP18.47■□□□□ 0.55
AC004846.1-201ENST00000554614 C11orf95C9JLR9 678 aaPredicted RBP18.46■□□□□ 0.55
AC004846.1-201ENST00000554614 TIMELESSQ9UNS1 1208 aa18.46■□□□□ 0.55
AC004846.1-201ENST00000554614 DAXXQ9UER7 740 aaPredicted RBP18.46■□□□□ 0.55
AC004846.1-201ENST00000554614 ARID3CA6NKF2 412 aa18.43■□□□□ 0.54
AC004846.1-201ENST00000554614 EIF4G2P78344 907 aaKnown RBP eCLIP18.43■□□□□ 0.54
AC004846.1-201ENST00000554614 IPO9Q96P70 1041 aaKnown RBP18.42■□□□□ 0.54
AC004846.1-201ENST00000554614 AKNAQ7Z591 1439 aa18.42■□□□□ 0.54
AC004846.1-201ENST00000554614 PRKRIP1Q9H875 184 aaPredicted RBP18.41■□□□□ 0.54
AC004846.1-201ENST00000554614 KIF21AQ7Z4S6 1674 aa18.41■□□□□ 0.54
AC004846.1-201ENST00000554614 LRRC9Q6ZRR7 1453 aa18.4■□□□□ 0.54
AC004846.1-201ENST00000554614 ZNF326Q5BKZ1 582 aaKnown RBP18.4■□□□□ 0.54
AC004846.1-201ENST00000554614 NEFMP07197 916 aa18.38■□□□□ 0.53
AC004846.1-201ENST00000554614 EIF5BO60841 1220 aaKnown RBP18.36■□□□□ 0.53
AC004846.1-201ENST00000554614 ERICH6BQ5W0A0 696 aa18.34■□□□□ 0.53
AC004846.1-201ENST00000554614 FHOD3Q2V2M9 1422 aa18.34■□□□□ 0.53
AC004846.1-201ENST00000554614 SKAP1Q86WV1 359 aa18.33■□□□□ 0.53
AC004846.1-201ENST00000554614 TIAM1Q13009 1591 aa18.33■□□□□ 0.52
AC004846.1-201ENST00000554614 L3MBTL2Q969R5 705 aa18.32■□□□□ 0.52
AC004846.1-201ENST00000554614 GAPVD1Q14C86 1478 aa18.32■□□□□ 0.52
AC004846.1-201ENST00000554614 ZBED9Q6R2W3 1325 aa18.32■□□□□ 0.52
AC004846.1-201ENST00000554614 CCDC18Q5T9S5 1454 aa18.3■□□□□ 0.52
AC004846.1-201ENST00000554614 AQRO60306 1485 aaKnown RBP eCLIP18.29■□□□□ 0.52
AC004846.1-201ENST00000554614 MTUS2Q5JR59 1369 aa18.27■□□□□ 0.52
AC004846.1-201ENST00000554614 PTPRKQ15262 1439 aa18.26■□□□□ 0.51
AC004846.1-201ENST00000554614 SLC4A3P48751 1232 aa18.26■□□□□ 0.51
AC004846.1-201ENST00000554614 BRPF3Q9ULD4 1205 aa18.26■□□□□ 0.51
AC004846.1-201ENST00000554614 CUL7Q14999 1698 aa18.25■□□□□ 0.51
AC004846.1-201ENST00000554614 ABCA5Q8WWZ7 1642 aa18.25■□□□□ 0.51
AC004846.1-201ENST00000554614 MRC2Q9UBG0 1479 aa18.24■□□□□ 0.51
AC004846.1-201ENST00000554614 NUDCQ9Y266 331 aa18.22■□□□□ 0.51
AC004846.1-201ENST00000554614 CNTLNQ9NXG0 1405 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms