RNA–Protein interactions for RNA: ENST00000554353.1

MTHFD1-206, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-206ENST00000554353 POTEMA6NI47 508 aa11.7□□□□□ -0.54
MTHFD1-206ENST00000554353 MNX1P50219 401 aaPredicted RBP11.68□□□□□ -0.54
MTHFD1-206ENST00000554353 FARP1Q9Y4F1 1045 aaPredicted RBP11.68□□□□□ -0.54
MTHFD1-206ENST00000554353 NUBP1P53384 320 aa11.66□□□□□ -0.54
MTHFD1-206ENST00000554353 RGL2O15211 777 aa11.65□□□□□ -0.54
MTHFD1-206ENST00000554353 DCAF8Q5TAQ9 597 aa11.64□□□□□ -0.55
MTHFD1-206ENST00000554353 GSE1Q14687 1217 aa11.63□□□□□ -0.55
MTHFD1-206ENST00000554353 POTEGQ6S5H5 508 aa11.63□□□□□ -0.55
MTHFD1-206ENST00000554353 PCDH10Q9P2E7 1040 aa11.61□□□□□ -0.55
MTHFD1-206ENST00000554353 TRIM41Q8WV44 630 aa11.59□□□□□ -0.55
MTHFD1-206ENST00000554353 FAM212AQ96EL1 285 aa11.59□□□□□ -0.55
MTHFD1-206ENST00000554353 NPM1P06748 294 aaKnown RBP eCLIP11.58□□□□□ -0.56
MTHFD1-206ENST00000554353 RASEFQ8IZ41 740 aa11.56□□□□□ -0.56
MTHFD1-206ENST00000554353 PLCB2Q00722 1185 aa11.55□□□□□ -0.56
MTHFD1-206ENST00000554353 OTUD5Q96G74 571 aa11.55□□□□□ -0.56
MTHFD1-206ENST00000554353 CLCN6P51797 869 aa11.52□□□□□ -0.57
MTHFD1-206ENST00000554353 CHGAP10645 457 aaKnown RBP11.49□□□□□ -0.57
MTHFD1-206ENST00000554353 CD44P16070 742 aaKnown RBP11.48□□□□□ -0.57
MTHFD1-206ENST00000554353 BBXQ8WY36 941 aaPredicted RBP11.48□□□□□ -0.57
MTHFD1-206ENST00000554353 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.48□□□□□ -0.57
MTHFD1-206ENST00000554353 RNF25Q96BH1 459 aaPredicted RBP11.47□□□□□ -0.57
MTHFD1-206ENST00000554353 DCBLD2Q96PD2 775 aa11.47□□□□□ -0.57
MTHFD1-206ENST00000554353 HAP1P54257 671 aaPredicted RBP11.45□□□□□ -0.58
MTHFD1-206ENST00000554353 TSPYL2Q9H2G4 693 aaPredicted RBP11.44□□□□□ -0.58
MTHFD1-206ENST00000554353 RIOK3O14730 519 aaKnown RBP11.43□□□□□ -0.58
MTHFD1-206ENST00000554353 PYGBP11216 843 aa11.43□□□□□ -0.58
MTHFD1-206ENST00000554353 CHRM1P11229 460 aaPredicted RBP11.41□□□□□ -0.58
MTHFD1-206ENST00000554353 PAXIP1Q6ZW49 1069 aaPredicted RBP11.41□□□□□ -0.58
MTHFD1-206ENST00000554353 CFAP44Q96MT7 982 aa11.4□□□□□ -0.58
MTHFD1-206ENST00000554353 TAOK2Q9UL54 1235 aa11.39□□□□□ -0.59
MTHFD1-206ENST00000554353 ZRANB1Q9UGI0 708 aa11.38□□□□□ -0.59
MTHFD1-206ENST00000554353 POTEB2H3BUK9 544 aa11.37□□□□□ -0.59
MTHFD1-206ENST00000554353 HS6ST3Q8IZP7 471 aa11.37□□□□□ -0.59
MTHFD1-206ENST00000554353 VGFO15240 615 aaPredicted RBP11.34□□□□□ -0.59
MTHFD1-206ENST00000554353 ZNF579Q8NAF0 562 aaKnown RBP11.34□□□□□ -0.59
MTHFD1-206ENST00000554353 SPRYD3Q8NCJ5 442 aa11.34□□□□□ -0.59
MTHFD1-206ENST00000554353 STK25O00506 426 aa11.32□□□□□ -0.6
MTHFD1-206ENST00000554353 PHF12Q96QT6 1004 aa11.32□□□□□ -0.6
MTHFD1-206ENST00000554353 PAK3O75914 559 aaPredicted RBP11.31□□□□□ -0.6
MTHFD1-206ENST00000554353 CCDC61Q9Y6R9 512 aa11.3□□□□□ -0.6
MTHFD1-206ENST00000554353 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.28□□□□□ -0.6
MTHFD1-206ENST00000554353 ZFP91Q96JP5 570 aaPredicted RBP11.28□□□□□ -0.6
MTHFD1-206ENST00000554353 STK24Q9Y6E0 443 aa11.26□□□□□ -0.61
MTHFD1-206ENST00000554353 ZNF467Q7Z7K2 595 aaPredicted RBP11.25□□□□□ -0.61
MTHFD1-206ENST00000554353 BCL11BQ9C0K0 894 aaPredicted RBP11.25□□□□□ -0.61
MTHFD1-206ENST00000554353 PCDHB8Q9UN66 801 aa11.24□□□□□ -0.61
MTHFD1-206ENST00000554353 PCDHB13Q9Y5F0 798 aa11.24□□□□□ -0.61
MTHFD1-206ENST00000554353 SGIP1Q9BQI5 828 aa11.23□□□□□ -0.61
MTHFD1-206ENST00000554353 DNAJC5Q9H3Z4 198 aa11.22□□□□□ -0.61
MTHFD1-206ENST00000554353 NKX1-1Q15270 411 aaPredicted RBP11.21□□□□□ -0.61
MTHFD1-206ENST00000554353 KIF12Q96FN5 646 aa11.21□□□□□ -0.61
MTHFD1-206ENST00000554353 GALR2O43603 387 aaPredicted RBP11.2□□□□□ -0.62
MTHFD1-206ENST00000554353 LCE2DQ5TA82 110 aaPredicted RBP11.2□□□□□ -0.62
MTHFD1-206ENST00000554353 VSIG10Q8N0Z9 540 aa11.2□□□□□ -0.62
MTHFD1-206ENST00000554353 TSHZ2Q9NRE2 1034 aa11.19□□□□□ -0.62
MTHFD1-206ENST00000554353 PDAP1Q13442 181 aaKnown RBP11.18□□□□□ -0.62
MTHFD1-206ENST00000554353 MS4A3Q96HJ5 214 aa11.17□□□□□ -0.62
MTHFD1-206ENST00000554353 MAP3K13O43283 966 aa11.16□□□□□ -0.62
MTHFD1-206ENST00000554353 PSEN1P49768 467 aa11.14□□□□□ -0.63
MTHFD1-206ENST00000554353 IFNL1Q8IU54 200 aa11.14□□□□□ -0.63
MTHFD1-206ENST00000554353 GTPBP6O43824 516 aaPredicted RBP11.13□□□□□ -0.63
MTHFD1-206ENST00000554353 KDM2AQ9Y2K7 1162 aa11.13□□□□□ -0.63
MTHFD1-206ENST00000554353 TRPC6Q9Y210 931 aa11.1□□□□□ -0.63
MTHFD1-206ENST00000554353 FAM163AQ96GL9 167 aaPredicted RBP11.07□□□□□ -0.64
MTHFD1-206ENST00000554353 RYDENQ9NUL5 291 aaKnown RBP11.07□□□□□ -0.64
MTHFD1-206ENST00000554353 NISCHQ9Y2I1 1504 aa11.04□□□□□ -0.64
MTHFD1-206ENST00000554353 POTEJP0CG39 1038 aa11.03□□□□□ -0.64
MTHFD1-206ENST00000554353 MAMSTRQ6ZN01 415 aa11.03□□□□□ -0.64
MTHFD1-206ENST00000554353 PELP1Q8IZL8 1130 aaKnown RBP11.02□□□□□ -0.65
MTHFD1-206ENST00000554353 CABP2Q9NPB3 220 aa11.02□□□□□ -0.65
MTHFD1-206ENST00000554353 BMP2KQ9NSY1 1161 aaPredicted RBP10.99□□□□□ -0.65
MTHFD1-206ENST00000554353 ATMINO43313 823 aaPredicted RBP10.98□□□□□ -0.65
MTHFD1-206ENST00000554353 ASTLQ6HA08 431 aaPredicted RBP10.98□□□□□ -0.65
MTHFD1-206ENST00000554353 CDAN1Q8IWY9 1227 aa10.98□□□□□ -0.65
MTHFD1-206ENST00000554353 EFCAB3Q8N7B9 438 aa10.98□□□□□ -0.65
MTHFD1-206ENST00000554353 BCANQ96GW7 911 aa10.97□□□□□ -0.65
MTHFD1-206ENST00000554353 MFRPQ9BY79 579 aa10.97□□□□□ -0.65
MTHFD1-206ENST00000554353 TIE1P35590 1138 aa10.95□□□□□ -0.66
MTHFD1-206ENST00000554353 ATN1P54259 1190 aaPredicted RBP10.95□□□□□ -0.66
MTHFD1-206ENST00000554353 TMEM106CQ9BVX2 250 aa10.95□□□□□ -0.66
MTHFD1-206ENST00000554353 TTLL13PA6NNM8 815 aa10.94□□□□□ -0.66
MTHFD1-206ENST00000554353 METRNQ9UJH8 293 aa10.94□□□□□ -0.66
MTHFD1-206ENST00000554353 GOLGA2Q08379 1002 aa10.93□□□□□ -0.66
MTHFD1-206ENST00000554353 SOX12O15370 315 aa10.92□□□□□ -0.66
MTHFD1-206ENST00000554353 NLRP6P59044 892 aa10.92□□□□□ -0.66
MTHFD1-206ENST00000554353 PHF8Q9UPP1 1060 aa10.92□□□□□ -0.66
MTHFD1-206ENST00000554353 C7P10643 843 aa10.9□□□□□ -0.66
MTHFD1-206ENST00000554353 FBXO22Q8NEZ5 403 aa10.88□□□□□ -0.67
MTHFD1-206ENST00000554353 SLC39A7Q92504 469 aa10.88□□□□□ -0.67
MTHFD1-206ENST00000554353 SCUBE2Q9NQ36 999 aa10.88□□□□□ -0.67
MTHFD1-206ENST00000554353 PPP1R37O75864 691 aa10.86□□□□□ -0.67
MTHFD1-206ENST00000554353 MKRN3Q13064 507 aaKnown RBP10.86□□□□□ -0.67
MTHFD1-206ENST00000554353 TRIM35Q9UPQ4 493 aa10.85□□□□□ -0.67
MTHFD1-206ENST00000554353 CADPS2Q86UW7 1296 aa10.84□□□□□ -0.67
MTHFD1-206ENST00000554353 MMRN1Q13201 1228 aa10.83□□□□□ -0.68
MTHFD1-206ENST00000554353 POTEFA5A3E0 1075 aa10.81□□□□□ -0.68
MTHFD1-206ENST00000554353 MS4A4AQ96JQ5 239 aa10.8□□□□□ -0.68
MTHFD1-206ENST00000554353 NBR1Q14596 966 aa10.79□□□□□ -0.68
MTHFD1-206ENST00000554353 WDR70Q9NW82 654 aa10.79□□□□□ -0.68
MTHFD1-206ENST00000554353 COLQQ9Y215 455 aaPredicted RBP10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms