RNA–Protein interactions for RNA: ENST00000554133.5

LINC01578-202, Transcript of long intergenic non-protein coding RNA 1578, humanhuman

TSL 2

Gene LINC01578, Length 1,776 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01578-202ENST00000554133 LCE2DQ5TA82 110 aaPredicted RBP9.82□□□□□ -0.84
LINC01578-202ENST00000554133 ASTLQ6HA08 431 aaPredicted RBP9.82□□□□□ -0.84
LINC01578-202ENST00000554133 NPM1P06748 294 aaKnown RBP eCLIP9.81□□□□□ -0.84
LINC01578-202ENST00000554133 ATMINO43313 823 aaPredicted RBP9.8□□□□□ -0.84
LINC01578-202ENST00000554133 SCUBE2Q9NQ36 999 aa9.79□□□□□ -0.84
LINC01578-202ENST00000554133 MS4A3Q96HJ5 214 aa9.77□□□□□ -0.85
LINC01578-202ENST00000554133 CDAN1Q8IWY9 1227 aa9.68□□□□□ -0.86
LINC01578-202ENST00000554133 MNX1P50219 401 aaPredicted RBP9.67□□□□□ -0.86
LINC01578-202ENST00000554133 ATN1P54259 1190 aaPredicted RBP9.66□□□□□ -0.86
LINC01578-202ENST00000554133 POTEFA5A3E0 1075 aa9.6□□□□□ -0.87
LINC01578-202ENST00000554133 MMRN1Q13201 1228 aa9.6□□□□□ -0.87
LINC01578-202ENST00000554133 TSPYL2Q9H2G4 693 aaPredicted RBP9.58□□□□□ -0.88
LINC01578-202ENST00000554133 SPDYE4A6NLX3 237 aa9.57□□□□□ -0.88
LINC01578-202ENST00000554133 BMP2KQ9NSY1 1161 aaPredicted RBP9.56□□□□□ -0.88
LINC01578-202ENST00000554133 KIF12Q96FN5 646 aa9.54□□□□□ -0.88
LINC01578-202ENST00000554133 CCDC61Q9Y6R9 512 aa9.52□□□□□ -0.88
LINC01578-202ENST00000554133 SEC24BO95487 1268 aa9.52□□□□□ -0.89
LINC01578-202ENST00000554133 TIE1P35590 1138 aa9.52□□□□□ -0.89
LINC01578-202ENST00000554133 TRPC6Q9Y210 931 aa9.49□□□□□ -0.89
LINC01578-202ENST00000554133 COLQQ9Y215 455 aaPredicted RBP9.49□□□□□ -0.89
LINC01578-202ENST00000554133 EHMT2Q96KQ7 1210 aa9.48□□□□□ -0.89
LINC01578-202ENST00000554133 ST18O60284 1047 aa9.47□□□□□ -0.89
LINC01578-202ENST00000554133 SPNS2Q8IVW8 549 aa9.45□□□□□ -0.9
LINC01578-202ENST00000554133 SLAIN1Q8ND83 568 aa9.45□□□□□ -0.9
LINC01578-202ENST00000554133 MAP3K13O43283 966 aa9.44□□□□□ -0.9
LINC01578-202ENST00000554133 TTLL13PA6NNM8 815 aa9.42□□□□□ -0.9
LINC01578-202ENST00000554133 IER5LQ5T953 404 aa9.42□□□□□ -0.9
LINC01578-202ENST00000554133 TRIM35Q9UPQ4 493 aa9.36□□□□□ -0.91
LINC01578-202ENST00000554133 TMEM121BQ9BXQ6 578 aaPredicted RBP9.35□□□□□ -0.91
LINC01578-202ENST00000554133 SNPHO15079 494 aa9.31□□□□□ -0.92
LINC01578-202ENST00000554133 SGIP1Q9BQI5 828 aa9.31□□□□□ -0.92
LINC01578-202ENST00000554133 PLCG2P16885 1265 aa9.3□□□□□ -0.92
LINC01578-202ENST00000554133 RASEFQ8IZ41 740 aa9.29□□□□□ -0.92
LINC01578-202ENST00000554133 PLEKHG5O94827 1062 aa9.29□□□□□ -0.92
LINC01578-202ENST00000554133 PCDHB13Q9Y5F0 798 aa9.27□□□□□ -0.93
LINC01578-202ENST00000554133 CSRNP3Q8WYN3 585 aa9.26□□□□□ -0.93
LINC01578-202ENST00000554133 MARVELD3Q96A59 401 aa9.24□□□□□ -0.93
LINC01578-202ENST00000554133 MIER1Q8N108 512 aa9.23□□□□□ -0.93
LINC01578-202ENST00000554133 TMEM106CQ9BVX2 250 aa9.22□□□□□ -0.93
LINC01578-202ENST00000554133 PROM2Q8N271 834 aa9.21□□□□□ -0.94
LINC01578-202ENST00000554133 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.21□□□□□ -0.94
LINC01578-202ENST00000554133 IRX5P78411 483 aaPredicted RBP9.2□□□□□ -0.94
LINC01578-202ENST00000554133 IFNL1Q8IU54 200 aa9.18□□□□□ -0.94
LINC01578-202ENST00000554133 OCEL1Q9H607 264 aa9.17□□□□□ -0.94
LINC01578-202ENST00000554133 EMP3P54852 163 aa9.15□□□□□ -0.94
LINC01578-202ENST00000554133 KRTAP3-3Q9BYR6 98 aa9.12□□□□□ -0.95
LINC01578-202ENST00000554133 KRTAP3-2Q9BYR7 98 aa9.12□□□□□ -0.95
LINC01578-202ENST00000554133 HS3ST6Q96QI5 342 aa9.09□□□□□ -0.95
LINC01578-202ENST00000554133 POTEB3A0JP26 581 aa9.08□□□□□ -0.96
LINC01578-202ENST00000554133 FAM205CA6NFA0 338 aa9.08□□□□□ -0.96
LINC01578-202ENST00000554133 NUBP1P53384 320 aa9.08□□□□□ -0.96
LINC01578-202ENST00000554133 POTEBQ6S5H4 581 aa9.08□□□□□ -0.96
LINC01578-202ENST00000554133 PLCD3Q8N3E9 789 aa9.08□□□□□ -0.96
LINC01578-202ENST00000554133 ZBTB47Q9UFB7 747 aaPredicted RBP9.06□□□□□ -0.96
LINC01578-202ENST00000554133 FAM212AQ96EL1 285 aa9.04□□□□□ -0.96
LINC01578-202ENST00000554133 C3orf67Q6ZVT6 689 aa9.04□□□□□ -0.96
LINC01578-202ENST00000554133 L3MBTL3Q96JM7 780 aaPredicted RBP9.01□□□□□ -0.97
LINC01578-202ENST00000554133 PDCD7Q8N8D1 485 aaKnown RBP8.95□□□□□ -0.98
LINC01578-202ENST00000554133 RNF166Q96A37 237 aaPredicted RBP8.95□□□□□ -0.98
LINC01578-202ENST00000554133 DCAF8Q5TAQ9 597 aa8.93□□□□□ -0.98
LINC01578-202ENST00000554133 PCDHB8Q9UN66 801 aa8.93□□□□□ -0.98
LINC01578-202ENST00000554133 PYGBP11216 843 aa8.91□□□□□ -0.98
LINC01578-202ENST00000554133 MKRN3Q13064 507 aaKnown RBP8.91□□□□□ -0.98
LINC01578-202ENST00000554133 GOLGA2Q08379 1002 aa8.9□□□□□ -0.98
LINC01578-202ENST00000554133 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.87□□□□□ -0.997e-8■□□□□ 10.6
LINC01578-202ENST00000554133 MYT1LQ9UL68 1186 aa8.87□□□□□ -0.99
LINC01578-202ENST00000554133 ERBB3P21860 1342 aa8.87□□□□□ -0.99
LINC01578-202ENST00000554133 HOXB1P14653 301 aaPredicted RBP8.86□□□□□ -0.99
LINC01578-202ENST00000554133 HOXB3P14651 431 aaPredicted RBP8.85□□□□□ -0.99
LINC01578-202ENST00000554133 ZNF710Q8N1W2 664 aa8.84□□□□□ -0.99
LINC01578-202ENST00000554133 ZNF467Q7Z7K2 595 aaPredicted RBP8.81□□□□□ -1
LINC01578-202ENST00000554133 G3V3G9 751 aa8.8□□□□□ -1
LINC01578-202ENST00000554133 DOK7Q18PE1 504 aa8.8□□□□□ -1
LINC01578-202ENST00000554133 PTGER2P43116 358 aa8.76□□□□□ -1.01
LINC01578-202ENST00000554133 VARS2Q5ST30 1063 aaKnown RBP8.76□□□□□ -1.01
LINC01578-202ENST00000554133 DPY19L2Q6NUT2 758 aa8.76□□□□□ -1.01
LINC01578-202ENST00000554133 PSEN1P49768 467 aa8.75□□□□□ -1.01
LINC01578-202ENST00000554133 ILDR1Q86SU0 546 aaPredicted RBP8.75□□□□□ -1.01
LINC01578-202ENST00000554133 BOLA1Q9Y3E2 137 aa8.75□□□□□ -1.01
LINC01578-202ENST00000554133 RIMBP2O15034 1052 aa8.74□□□□□ -1.01
LINC01578-202ENST00000554133 ZNF687Q8N1G0 1237 aa8.73□□□□□ -1.01
LINC01578-202ENST00000554133 GSE1Q14687 1217 aa8.71□□□□□ -1.02
LINC01578-202ENST00000554133 CHRM1P11229 460 aaPredicted RBP8.69□□□□□ -1.02
LINC01578-202ENST00000554133 ZSWIM6Q9HCJ5 1215 aa8.66□□□□□ -1.02
LINC01578-202ENST00000554133 PDAP1Q13442 181 aaKnown RBP8.65□□□□□ -1.02
LINC01578-202ENST00000554133 ANKRD13DQ6ZTN6 518 aa8.65□□□□□ -1.02
LINC01578-202ENST00000554133 CABP2Q9NPB3 220 aa8.63□□□□□ -1.03
LINC01578-202ENST00000554133 PLA2G2EQ9NZK7 142 aa8.62□□□□□ -1.03
LINC01578-202ENST00000554133 GPR153Q6NV75 609 aa8.59□□□□□ -1.03
LINC01578-202ENST00000554133 KLHL34Q8N239 644 aa8.57□□□□□ -1.04
LINC01578-202ENST00000554133 LSM11P83369 360 aaKnown RBP eCLIP8.56□□□□□ -1.04
LINC01578-202ENST00000554133 HCSTQ9UBK5 93 aa8.54□□□□□ -1.04
LINC01578-202ENST00000554133 ZNF316A6NFI3 1004 aaPredicted RBP8.53□□□□□ -1.04
LINC01578-202ENST00000554133 ARSIQ5FYB1 569 aa8.52□□□□□ -1.05
LINC01578-202ENST00000554133 TMEM92Q6UXU6 159 aa8.51□□□□□ -1.05
LINC01578-202ENST00000554133 FBXO3Q9UK99 471 aa8.51□□□□□ -1.05
LINC01578-202ENST00000554133 MICALL2Q8IY33 904 aa8.49□□□□□ -1.05
LINC01578-202ENST00000554133 PBX2P40425 430 aa8.46□□□□□ -1.05
LINC01578-202ENST00000554133 FKBP8Q14318 412 aa8.46□□□□□ -1.05
LINC01578-202ENST00000554133 EFCAB3Q8N7B9 438 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms