RNA–Protein interactions for RNA: ENST00000552422.5

CNOT2-238, Transcript of CCR4-NOT transcription complex subunit 2, human

TSL 3

Gene CNOT2, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT2-238	ENST00000552422	ZBTB47	Q9UFB7	747 aa	Predicted RBP	13.15	□□□□□ -0.3
CNOT2-238	ENST00000552422	GABBR2	O75899	941 aa		13.13	□□□□□ -0.31
CNOT2-238	ENST00000552422	VASP	P50552	380 aa	Predicted RBP	13.11	□□□□□ -0.31
CNOT2-238	ENST00000552422	ZNF579	Q8NAF0	562 aa	Known RBP	13.11	□□□□□ -0.31
CNOT2-238	ENST00000552422	SCRIB	Q14160	1630 aa		13.1	□□□□□ -0.31
CNOT2-238	ENST00000552422	BICRA	Q9NZM4	1560 aa		13.1	□□□□□ -0.31
CNOT2-238	ENST00000552422	TSPYL2	Q9H2G4	693 aa	Predicted RBP	13.09	□□□□□ -0.31
CNOT2-238	ENST00000552422	CLCN6	P51797	869 aa		13.06	□□□□□ -0.32
CNOT2-238	ENST00000552422	PHF12	Q96QT6	1004 aa		13.04	□□□□□ -0.32
CNOT2-238	ENST00000552422	RASEF	Q8IZ41	740 aa		13.03	□□□□□ -0.32
CNOT2-238	ENST00000552422	KLHL34	Q8N239	644 aa		13.02	□□□□□ -0.33
CNOT2-238	ENST00000552422	NUBP1	P53384	320 aa		12.99	□□□□□ -0.33
CNOT2-238	ENST00000552422	SHROOM4	Q9ULL8	1493 aa		12.97	□□□□□ -0.33
CNOT2-238	ENST00000552422	CCDC61	Q9Y6R9	512 aa		12.96	□□□□□ -0.33
CNOT2-238	ENST00000552422	GALR2	O43603	387 aa	Predicted RBP	12.94	□□□□□ -0.34
CNOT2-238	ENST00000552422	FAM212A	Q96EL1	285 aa		12.94	□□□□□ -0.34
CNOT2-238	ENST00000552422	DCBLD2	Q96PD2	775 aa		12.9	□□□□□ -0.34
CNOT2-238	ENST00000552422	IFNLR1	Q8IU57	520 aa	Predicted RBP	12.89	□□□□□ -0.35
CNOT2-238	ENST00000552422	DCAF8	Q5TAQ9	597 aa		12.88	□□□□□ -0.35
CNOT2-238	ENST00000552422	MS4A3	Q96HJ5	214 aa		12.87	□□□□□ -0.35
CNOT2-238	ENST00000552422	KIF12	Q96FN5	646 aa		12.86	□□□□□ -0.35
CNOT2-238	ENST00000552422	SPOCK2	Q92563	424 aa		12.83	□□□□□ -0.36
CNOT2-238	ENST00000552422	POTEI	P0CG38	1075 aa		12.82	□□□□□ -0.36
CNOT2-238	ENST00000552422	MAP3K13	O43283	966 aa		12.81	□□□□□ -0.36
CNOT2-238	ENST00000552422	GSE1	Q14687	1217 aa		12.78	□□□□□ -0.36
CNOT2-238	ENST00000552422	PCDHB13	Q9Y5F0	798 aa		12.76	□□□□□ -0.37
CNOT2-238	ENST00000552422	PYGB	P11216	843 aa		12.75	□□□□□ -0.37
CNOT2-238	ENST00000552422	EIF4G1	Q04637	1599 aa	Known RBP	12.73	□□□□□ -0.37
CNOT2-238	ENST00000552422	SGIP1	Q9BQI5	828 aa		12.73	□□□□□ -0.37
CNOT2-238	ENST00000552422	CIZ1	Q9ULV3	898 aa	Predicted RBP	12.72	□□□□□ -0.37
CNOT2-238	ENST00000552422	TRPC6	Q9Y210	931 aa		12.69	□□□□□ -0.38
CNOT2-238	ENST00000552422	IFNL1	Q8IU54	200 aa		12.68	□□□□□ -0.38
CNOT2-238	ENST00000552422	CC2D2A	Q9P2K1	1620 aa		12.67	□□□□□ -0.38
CNOT2-238	ENST00000552422	ATMIN	O43313	823 aa	Predicted RBP	12.67	□□□□□ -0.38
CNOT2-238	ENST00000552422	ASTL	Q6HA08	431 aa	Predicted RBP	12.67	□□□□□ -0.38
CNOT2-238	ENST00000552422	BMP2K	Q9NSY1	1161 aa	Predicted RBP	12.65	□□□□□ -0.38
CNOT2-238	ENST00000552422	TIE1	P35590	1138 aa		12.64	□□□□□ -0.39
CNOT2-238	ENST00000552422	PELP1	Q8IZL8	1130 aa	Known RBP	12.63	□□□□□ -0.39
CNOT2-238	ENST00000552422	ATN1	P54259	1190 aa	Predicted RBP	12.62	□□□□□ -0.39
CNOT2-238	ENST00000552422	CHRM1	P11229	460 aa	Predicted RBP	12.6	□□□□□ -0.39
CNOT2-238	ENST00000552422	LHX8	Q68G74	356 aa		12.6	□□□□□ -0.39
CNOT2-238	ENST00000552422	PCDHB8	Q9UN66	801 aa		12.6	□□□□□ -0.39
CNOT2-238	ENST00000552422	TTLL13P	A6NNM8	815 aa		12.59	□□□□□ -0.39
CNOT2-238	ENST00000552422	ZNF467	Q7Z7K2	595 aa	Predicted RBP	12.57	□□□□□ -0.4
CNOT2-238	ENST00000552422	SLC39A7	Q92504	469 aa		12.57	□□□□□ -0.4
CNOT2-238	ENST00000552422	SMARCA4	P51532	1647 aa		12.56	□□□□□ -0.4
CNOT2-238	ENST00000552422	TMEM106C	Q9BVX2	250 aa		12.56	□□□□□ -0.4
CNOT2-238	ENST00000552422	METRN	Q9UJH8	293 aa		12.55	□□□□□ -0.4
CNOT2-238	ENST00000552422	CECR2	Q9BXF3	1484 aa		12.54	□□□□□ -0.4
CNOT2-238	ENST00000552422	C7	P10643	843 aa		12.54	□□□□□ -0.4
CNOT2-238	ENST00000552422	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	12.53	□□□□□ -0.4
CNOT2-238	ENST00000552422	TRIM41	Q8WV44	630 aa		12.53	□□□□□ -0.4
CNOT2-238	ENST00000552422	TRIM35	Q9UPQ4	493 aa		12.52	□□□□□ -0.41
CNOT2-238	ENST00000552422	PEG3	Q9GZU2	1588 aa		12.46	□□□□□ -0.42
CNOT2-238	ENST00000552422	SMARCA2	P51531	1590 aa		12.45	□□□□□ -0.42
CNOT2-238	ENST00000552422	PSEN1	P49768	467 aa		12.45	□□□□□ -0.42
CNOT2-238	ENST00000552422	MROH2B	Q7Z745	1585 aa		12.44	□□□□□ -0.42
CNOT2-238	ENST00000552422	SEC24B	O95487	1268 aa		12.43	□□□□□ -0.42
CNOT2-238	ENST00000552422	PDAP1	Q13442	181 aa	Known RBP	12.43	□□□□□ -0.42
CNOT2-238	ENST00000552422	IER5L	Q5T953	404 aa		12.43	□□□□□ -0.42
CNOT2-238	ENST00000552422	ATAD2B	Q9ULI0	1458 aa		12.42	□□□□□ -0.42
CNOT2-238	ENST00000552422	POTEB2	H3BUK9	544 aa		12.42	□□□□□ -0.42
CNOT2-238	ENST00000552422	HMGXB3	Q12766	1538 aa		12.42	□□□□□ -0.42
CNOT2-238	ENST00000552422	NCAPD3	P42695	1498 aa		12.4	□□□□□ -0.42
CNOT2-238	ENST00000552422	GOLGA2	Q08379	1002 aa		12.39	□□□□□ -0.43
CNOT2-238	ENST00000552422	POTEF	A5A3E0	1075 aa		12.37	□□□□□ -0.43
CNOT2-238	ENST00000552422	COLQ	Q9Y215	455 aa	Predicted RBP	12.37	□□□□□ -0.43
CNOT2-238	ENST00000552422	RIOK3	O14730	519 aa	Known RBP	12.36	□□□□□ -0.43
CNOT2-238	ENST00000552422	WIZ	O95785	1651 aa		12.35	□□□□□ -0.43
CNOT2-238	ENST00000552422	ECM2	O94769	699 aa	Predicted RBP	12.35	□□□□□ -0.43
CNOT2-238	ENST00000552422	PLCG2	P16885	1265 aa		12.34	□□□□□ -0.43
CNOT2-238	ENST00000552422	MKRN3	Q13064	507 aa	Known RBP	12.34	□□□□□ -0.43
CNOT2-238	ENST00000552422	RNF25	Q96BH1	459 aa	Predicted RBP	12.34	□□□□□ -0.43
CNOT2-238	ENST00000552422	BAZ1B	Q9UIG0	1483 aa	Known RBP	12.33	□□□□□ -0.44
CNOT2-238	ENST00000552422	IRX5	P78411	483 aa	Predicted RBP	12.31	□□□□□ -0.44
CNOT2-238	ENST00000552422	PKD2	Q13563	968 aa		12.31	□□□□□ -0.44
CNOT2-238	ENST00000552422	OTUD5	Q96G74	571 aa		12.31	□□□□□ -0.44
CNOT2-238	ENST00000552422	CABP2	Q9NPB3	220 aa		12.31	□□□□□ -0.44
CNOT2-238	ENST00000552422	POTEJ	P0CG39	1038 aa		12.3	□□□□□ -0.44
CNOT2-238	ENST00000552422	VGF	O15240	615 aa	Predicted RBP	12.29	□□□□□ -0.44
CNOT2-238	ENST00000552422	MAMSTR	Q6ZN01	415 aa		12.29	□□□□□ -0.44
CNOT2-238	ENST00000552422	OCEL1	Q9H607	264 aa		12.29	□□□□□ -0.44
CNOT2-238	ENST00000552422	RSF1	Q96T23	1441 aa	Predicted RBP	12.28	□□□□□ -0.44
CNOT2-238	ENST00000552422	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	12.26	□□□□□ -0.45
CNOT2-238	ENST00000552422	ZFP91	Q96JP5	570 aa	Predicted RBP	12.26	□□□□□ -0.45
CNOT2-238	ENST00000552422	SCUBE2	Q9NQ36	999 aa		12.26	□□□□□ -0.45
CNOT2-238	ENST00000552422	TAOK2	Q9UL54	1235 aa		12.26	□□□□□ -0.45
CNOT2-238	ENST00000552422	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	12.24	□□□□□ -0.45
CNOT2-238	ENST00000552422	RGL2	O15211	777 aa		12.22	□□□□□ -0.45
CNOT2-238	ENST00000552422	TOP2A	P11388	1531 aa	Known RBP	12.21	□□□□□ -0.45
CNOT2-238	ENST00000552422	PDCD7	Q8N8D1	485 aa	Known RBP	12.19	□□□□□ -0.46
CNOT2-238	ENST00000552422	EFCAB3	Q8N7B9	438 aa		12.18	□□□□□ -0.46
CNOT2-238	ENST00000552422	BCL11B	Q9C0K0	894 aa	Predicted RBP	12.16	□□□□□ -0.46
CNOT2-238	ENST00000552422	STK25	O00506	426 aa		12.14	□□□□□ -0.47
CNOT2-238	ENST00000552422	STK24	Q9Y6E0	443 aa		12.14	□□□□□ -0.47
CNOT2-238	ENST00000552422	ILDR1	Q86SU0	546 aa	Predicted RBP	12.13	□□□□□ -0.47
CNOT2-238	ENST00000552422	L3MBTL3	Q96JM7	780 aa	Predicted RBP	12.13	□□□□□ -0.47
CNOT2-238	ENST00000552422	LAMC3	Q9Y6N6	1575 aa		12.13	□□□□□ -0.47
CNOT2-238	ENST00000552422	PRDM2	Q13029	1718 aa		12.1	□□□□□ -0.47
CNOT2-238	ENST00000552422	SOX12	O15370	315 aa		12.09	□□□□□ -0.47

Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms