RNA–Protein interactions for RNA: ENST00000552323.1

ATXN2-225, Transcript of ataxin 2, humanhuman

TSL 3

Gene ATXN2, Length 430 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-225ENST00000552323 RASEFQ8IZ41 740 aa13.22□□□□□ -0.29
ATXN2-225ENST00000552323 NUBP1P53384 320 aa13.17□□□□□ -0.3
ATXN2-225ENST00000552323 MS4A3Q96HJ5 214 aa13.16□□□□□ -0.3
ATXN2-225ENST00000552323 KIF12Q96FN5 646 aa13.14□□□□□ -0.31
ATXN2-225ENST00000552323 VASPP50552 380 aaPredicted RBP13.12□□□□□ -0.31
ATXN2-225ENST00000552323 LHX8Q68G74 356 aa13.11□□□□□ -0.31
ATXN2-225ENST00000552323 FAM212AQ96EL1 285 aa13.07□□□□□ -0.32
ATXN2-225ENST00000552323 MAP3K13O43283 966 aa13.05□□□□□ -0.32
ATXN2-225ENST00000552323 ASTLQ6HA08 431 aaPredicted RBP13.04□□□□□ -0.32
ATXN2-225ENST00000552323 ATMINO43313 823 aaPredicted RBP13.02□□□□□ -0.33
ATXN2-225ENST00000552323 SGIP1Q9BQI5 828 aa13.02□□□□□ -0.33
ATXN2-225ENST00000552323 PELP1Q8IZL8 1130 aaKnown RBP13□□□□□ -0.33
ATXN2-225ENST00000552323 KLHL34Q8N239 644 aa12.99□□□□□ -0.33
ATXN2-225ENST00000552323 DCAF8Q5TAQ9 597 aa12.96□□□□□ -0.33
ATXN2-225ENST00000552323 TIE1P35590 1138 aa12.95□□□□□ -0.34
ATXN2-225ENST00000552323 TRPC6Q9Y210 931 aa12.95□□□□□ -0.34
ATXN2-225ENST00000552323 PCDHB13Q9Y5F0 798 aa12.95□□□□□ -0.34
ATXN2-225ENST00000552323 BMP2KQ9NSY1 1161 aaPredicted RBP12.94□□□□□ -0.34
ATXN2-225ENST00000552323 SLC39A7Q92504 469 aa12.93□□□□□ -0.34
ATXN2-225ENST00000552323 ATN1P54259 1190 aaPredicted RBP12.92□□□□□ -0.34
ATXN2-225ENST00000552323 C7P10643 843 aa12.91□□□□□ -0.34
ATXN2-225ENST00000552323 GSE1Q14687 1217 aa12.89□□□□□ -0.35
ATXN2-225ENST00000552323 IFNLR1Q8IU57 520 aaPredicted RBP12.89□□□□□ -0.35
ATXN2-225ENST00000552323 METRNQ9UJH8 293 aa12.89□□□□□ -0.35
ATXN2-225ENST00000552323 IFNL1Q8IU54 200 aa12.88□□□□□ -0.35
ATXN2-225ENST00000552323 TTLL13PA6NNM8 815 aa12.86□□□□□ -0.35
ATXN2-225ENST00000552323 POTEB2H3BUK9 544 aa12.86□□□□□ -0.35
ATXN2-225ENST00000552323 PYGBP11216 843 aa12.86□□□□□ -0.35
ATXN2-225ENST00000552323 SPOCK2Q92563 424 aa12.85□□□□□ -0.35
ATXN2-225ENST00000552323 CHRM1P11229 460 aaPredicted RBP12.79□□□□□ -0.36
ATXN2-225ENST00000552323 TRIM35Q9UPQ4 493 aa12.77□□□□□ -0.37
ATXN2-225ENST00000552323 OTUD5Q96G74 571 aa12.76□□□□□ -0.37
ATXN2-225ENST00000552323 TMEM106CQ9BVX2 250 aa12.76□□□□□ -0.37
ATXN2-225ENST00000552323 POTEFA5A3E0 1075 aa12.75□□□□□ -0.37
ATXN2-225ENST00000552323 IER5LQ5T953 404 aa12.75□□□□□ -0.37
ATXN2-225ENST00000552323 PCDHB8Q9UN66 801 aa12.74□□□□□ -0.37
ATXN2-225ENST00000552323 ZNF467Q7Z7K2 595 aaPredicted RBP12.72□□□□□ -0.37
ATXN2-225ENST00000552323 POTEJP0CG39 1038 aa12.71□□□□□ -0.37
ATXN2-225ENST00000552323 CIZ1Q9ULV3 898 aaPredicted RBP12.69□□□□□ -0.38
ATXN2-225ENST00000552323 MAMSTRQ6ZN01 415 aa12.68□□□□□ -0.38
ATXN2-225ENST00000552323 COLQQ9Y215 455 aaPredicted RBP12.68□□□□□ -0.38
ATXN2-225ENST00000552323 SEC24BO95487 1268 aa12.67□□□□□ -0.38
ATXN2-225ENST00000552323 TRIM41Q8WV44 630 aa12.62□□□□□ -0.39
ATXN2-225ENST00000552323 IRX5P78411 483 aaPredicted RBP12.6□□□□□ -0.39
ATXN2-225ENST00000552323 SCUBE2Q9NQ36 999 aa12.6□□□□□ -0.39
ATXN2-225ENST00000552323 PSEN1P49768 467 aa12.58□□□□□ -0.4
ATXN2-225ENST00000552323 PLCG2P16885 1265 aa12.57□□□□□ -0.4
ATXN2-225ENST00000552323 PDAP1Q13442 181 aaKnown RBP12.56□□□□□ -0.4
ATXN2-225ENST00000552323 OCEL1Q9H607 264 aa12.54□□□□□ -0.4
ATXN2-225ENST00000552323 GOLGA2Q08379 1002 aa12.5□□□□□ -0.41
ATXN2-225ENST00000552323 MKRN3Q13064 507 aaKnown RBP12.49□□□□□ -0.41
ATXN2-225ENST00000552323 PDCD7Q8N8D1 485 aaKnown RBP12.44□□□□□ -0.42
ATXN2-225ENST00000552323 CABP2Q9NPB3 220 aa12.42□□□□□ -0.42
ATXN2-225ENST00000552323 ILDR1Q86SU0 546 aaPredicted RBP12.41□□□□□ -0.42
ATXN2-225ENST00000552323 RNF25Q96BH1 459 aaPredicted RBP12.4□□□□□ -0.42
ATXN2-225ENST00000552323 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.4□□□□□ -0.424e-8■□□□□ 8.1
ATXN2-225ENST00000552323 RIOK3O14730 519 aaKnown RBP12.39□□□□□ -0.43
ATXN2-225ENST00000552323 SLAIN1Q8ND83 568 aa12.37□□□□□ -0.43
ATXN2-225ENST00000552323 L3MBTL3Q96JM7 780 aaPredicted RBP12.36□□□□□ -0.43
ATXN2-225ENST00000552323 VGFO15240 615 aaPredicted RBP12.35□□□□□ -0.43
ATXN2-225ENST00000552323 LCE2DQ5TA82 110 aaPredicted RBP12.33□□□□□ -0.44
ATXN2-225ENST00000552323 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.33□□□□□ -0.44
ATXN2-225ENST00000552323 POTEMA6NI47 508 aa12.32□□□□□ -0.44
ATXN2-225ENST00000552323 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.31□□□□□ -0.44
ATXN2-225ENST00000552323 FAM163AQ96GL9 167 aaPredicted RBP12.31□□□□□ -0.44
ATXN2-225ENST00000552323 ZFP91Q96JP5 570 aaPredicted RBP12.31□□□□□ -0.44
ATXN2-225ENST00000552323 POTEGQ6S5H5 508 aa12.3□□□□□ -0.44
ATXN2-225ENST00000552323 EFCAB3Q8N7B9 438 aa12.3□□□□□ -0.44
ATXN2-225ENST00000552323 DPY19L2Q6NUT2 758 aa12.28□□□□□ -0.44
ATXN2-225ENST00000552323 TAOK2Q9UL54 1235 aa12.28□□□□□ -0.44
ATXN2-225ENST00000552323 C3orf67Q6ZVT6 689 aa12.27□□□□□ -0.45
ATXN2-225ENST00000552323 ECM2O94769 699 aaPredicted RBP12.26□□□□□ -0.45
ATXN2-225ENST00000552323 PKD2Q13563 968 aa12.26□□□□□ -0.45
ATXN2-225ENST00000552323 SOX12O15370 315 aa12.24□□□□□ -0.45
ATXN2-225ENST00000552323 BOLA1Q9Y3E2 137 aa12.22□□□□□ -0.45
ATXN2-225ENST00000552323 SNPHO15079 494 aa12.2□□□□□ -0.46
ATXN2-225ENST00000552323 G3V3G9 751 aa12.19□□□□□ -0.46
ATXN2-225ENST00000552323 ST18O60284 1047 aa12.18□□□□□ -0.46
ATXN2-225ENST00000552323 TMEM121BQ9BXQ6 578 aaPredicted RBP12.18□□□□□ -0.46
ATXN2-225ENST00000552323 BCL11BQ9C0K0 894 aaPredicted RBP12.18□□□□□ -0.46
ATXN2-225ENST00000552323 PCDH10Q9P2E7 1040 aa12.18□□□□□ -0.46
ATXN2-225ENST00000552323 RGL2O15211 777 aa12.16□□□□□ -0.46
ATXN2-225ENST00000552323 MS4A4AQ96JQ5 239 aa12.14□□□□□ -0.47
ATXN2-225ENST00000552323 PHF8Q9UPP1 1060 aa12.14□□□□□ -0.47
ATXN2-225ENST00000552323 STK24Q9Y6E0 443 aa12.14□□□□□ -0.47
ATXN2-225ENST00000552323 STK25O00506 426 aa12.11□□□□□ -0.47
ATXN2-225ENST00000552323 NLRP6P59044 892 aa12.1□□□□□ -0.47
ATXN2-225ENST00000552323 MICALL2Q8IY33 904 aa12.09□□□□□ -0.47
ATXN2-225ENST00000552323 FBXO22Q8NEZ5 403 aa12.08□□□□□ -0.48
ATXN2-225ENST00000552323 MFRPQ9BY79 579 aa12.05□□□□□ -0.48
ATXN2-225ENST00000552323 PLSCR2Q9NRY7 297 aa12.02□□□□□ -0.49
ATXN2-225ENST00000552323 HOXB3P14651 431 aaPredicted RBP12□□□□□ -0.49
ATXN2-225ENST00000552323 TMEM92Q6UXU6 159 aa12□□□□□ -0.49
ATXN2-225ENST00000552323 CDAN1Q8IWY9 1227 aa11.99□□□□□ -0.49
ATXN2-225ENST00000552323 MARVELD3Q96A59 401 aa11.96□□□□□ -0.49
ATXN2-225ENST00000552323 DOK7Q18PE1 504 aa11.95□□□□□ -0.5
ATXN2-225ENST00000552323 HS6ST3Q8IZP7 471 aa11.95□□□□□ -0.5
ATXN2-225ENST00000552323 EMP3P54852 163 aa11.91□□□□□ -0.5
ATXN2-225ENST00000552323 ZNF710Q8N1W2 664 aa11.9□□□□□ -0.5
ATXN2-225ENST00000552323 HOXB1P14653 301 aaPredicted RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms