RNA–Protein interactions for RNA: ENST00000550678.1

LINC02388-201, Transcript of long intergenic non-protein coding RNA 2388, humanhuman

TSL 2 BASIC

Gene LINC02388, Length 1,975 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02388-201ENST00000550678 NPM1P06748 294 aaKnown RBP eCLIP9.48□□□□□ -0.89
LINC02388-201ENST00000550678 RSPH4AQ5TD94 716 aa9.47□□□□□ -0.89
LINC02388-201ENST00000550678 ANP32EQ9BTT0 268 aa9.45□□□□□ -0.9
LINC02388-201ENST00000550678 NEUROD1Q13562 356 aa9.44□□□□□ -0.9
LINC02388-201ENST00000550678 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.44□□□□□ -0.9
LINC02388-201ENST00000550678 CCDC136Q96JN2 1154 aa9.44□□□□□ -0.9
LINC02388-201ENST00000550678 BCCIPQ9P287 314 aaKnown RBP eCLIP9.43□□□□□ -0.9
LINC02388-201ENST00000550678 PUS7Q96PZ0 661 aaKnown RBP9.41□□□□□ -0.9
LINC02388-201ENST00000550678 POLR3GLQ9BT43 218 aa9.41□□□□□ -0.9
LINC02388-201ENST00000550678 CCDC9Q9Y3X0 531 aaKnown RBP9.41□□□□□ -0.9
LINC02388-201ENST00000550678 CCDC180Q9P1Z9 1646 aa9.4□□□□□ -0.91
LINC02388-201ENST00000550678 AAMPQ13685 434 aa9.39□□□□□ -0.91
LINC02388-201ENST00000550678 IFNLR1Q8IU57 520 aaPredicted RBP9.39□□□□□ -0.91
LINC02388-201ENST00000550678 DNAJC5Q9H3Z4 198 aa9.39□□□□□ -0.91
LINC02388-201ENST00000550678 ZNF326Q5BKZ1 582 aaKnown RBP9.38□□□□□ -0.91
LINC02388-201ENST00000550678 RSPH6AQ9H0K4 717 aa9.37□□□□□ -0.91
LINC02388-201ENST00000550678 SPRYD3Q8NCJ5 442 aa9.35□□□□□ -0.91
LINC02388-201ENST00000550678 IRX6P78412 446 aaPredicted RBP9.35□□□□□ -0.91
LINC02388-201ENST00000550678 VASPP50552 380 aaPredicted RBP9.34□□□□□ -0.91
LINC02388-201ENST00000550678 SLC4A2P04920 1241 aa9.33□□□□□ -0.92
LINC02388-201ENST00000550678 A0A0U1RQG5 324 aaPredicted RBP9.31□□□□□ -0.92
LINC02388-201ENST00000550678 NAP1L5Q96NT1 182 aaPredicted RBP9.29□□□□□ -0.92
LINC02388-201ENST00000550678 MYCNP04198 464 aaPredicted RBP9.27□□□□□ -0.93
LINC02388-201ENST00000550678 RBM10P98175 930 aaKnown RBP9.24□□□□□ -0.93
LINC02388-201ENST00000550678 BRPF3Q9ULD4 1205 aa9.24□□□□□ -0.93
LINC02388-201ENST00000550678 TICAM2Q86XR7 235 aa9.23□□□□□ -0.93
LINC02388-201ENST00000550678 SALL2Q9Y467 1007 aaPredicted RBP9.23□□□□□ -0.93
LINC02388-201ENST00000550678 NECTIN2Q92692 538 aa9.22□□□□□ -0.93
LINC02388-201ENST00000550678 CLSPNQ9HAW4 1339 aa9.21□□□□□ -0.93
LINC02388-201ENST00000550678 BRPF1P55201 1214 aaPredicted RBP9.21□□□□□ -0.94
LINC02388-201ENST00000550678 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.21□□□□□ -0.94
LINC02388-201ENST00000550678 DMRT2Q9Y5R5 561 aa9.21□□□□□ -0.94
LINC02388-201ENST00000550678 ERICH6BQ5W0A0 696 aa9.2□□□□□ -0.94
LINC02388-201ENST00000550678 ZBTB7CA1YPR0 619 aa9.19□□□□□ -0.94
LINC02388-201ENST00000550678 TRHP20396 242 aaPredicted RBP9.19□□□□□ -0.94
LINC02388-201ENST00000550678 ZNF592Q92610 1267 aa9.19□□□□□ -0.94
LINC02388-201ENST00000550678 POTEHQ6S545 545 aa9.19□□□□□ -0.94
LINC02388-201ENST00000550678 ZFP91Q96JP5 570 aaPredicted RBP9.19□□□□□ -0.94
LINC02388-201ENST00000550678 ARID3AQ99856 593 aa9.19□□□□□ -0.94
LINC02388-201ENST00000550678 ECM2O94769 699 aaPredicted RBP9.17□□□□□ -0.94
LINC02388-201ENST00000550678 DIEXFQ68CQ4 756 aaKnown RBP9.14□□□□□ -0.95
LINC02388-201ENST00000550678 TMED8Q6PL24 325 aaPredicted RBP9.13□□□□□ -0.95
LINC02388-201ENST00000550678 RGL2O15211 777 aa9.13□□□□□ -0.95
LINC02388-201ENST00000550678 CLSTN1O94985 981 aa9.12□□□□□ -0.95
LINC02388-201ENST00000550678 ZNF692Q9BU19 519 aaPredicted RBP9.12□□□□□ -0.95
LINC02388-201ENST00000550678 ATF5Q9Y2D1 282 aaPredicted RBP9.12□□□□□ -0.95
LINC02388-201ENST00000550678 RNF216Q9NWF9 866 aaPredicted RBP9.1□□□□□ -0.95
LINC02388-201ENST00000550678 NCLP19338 710 aaKnown RBP9.08□□□□□ -0.96
LINC02388-201ENST00000550678 DEKP35659 375 aaKnown RBP9.08□□□□□ -0.96
LINC02388-201ENST00000550678 ZNF428Q96B54 188 aa9.08□□□□□ -0.96
LINC02388-201ENST00000550678 PSMD1Q99460 953 aa9.08□□□□□ -0.96
LINC02388-201ENST00000550678 CERS3Q8IU89 383 aa9.07□□□□□ -0.96
LINC02388-201ENST00000550678 PROM2Q8N271 834 aa9.06□□□□□ -0.96
LINC02388-201ENST00000550678 ZMYND15Q9H091 742 aa9.06□□□□□ -0.96
LINC02388-201ENST00000550678 CWC22Q9HCG8 908 aaKnown RBP9.06□□□□□ -0.96
LINC02388-201ENST00000550678 PRDM10Q9NQV6 1147 aa9.06□□□□□ -0.96
LINC02388-201ENST00000550678 GLIPR1L2Q4G1C9 344 aa9.04□□□□□ -0.96
LINC02388-201ENST00000550678 C1orf115Q9H7X2 142 aa9.04□□□□□ -0.96
LINC02388-201ENST00000550678 SPDYE4A6NLX3 237 aa9.03□□□□□ -0.96
LINC02388-201ENST00000550678 CHGAP10645 457 aaKnown RBP9.03□□□□□ -0.96
LINC02388-201ENST00000550678 RNF39Q9H2S5 420 aa9.03□□□□□ -0.96
LINC02388-201ENST00000550678 NAP1L2Q9ULW6 460 aaPredicted RBP9.03□□□□□ -0.96
LINC02388-201ENST00000550678 CNPY4Q8N129 248 aa9.02□□□□□ -0.97
LINC02388-201ENST00000550678 NEUROD2Q15784 382 aa9.01□□□□□ -0.97
LINC02388-201ENST00000550678 CHRM1P11229 460 aaPredicted RBP9.01□□□□□ -0.97
LINC02388-201ENST00000550678 PRDM16Q9HAZ2 1276 aa9.01□□□□□ -0.97
LINC02388-201ENST00000550678 RAD21O60216 631 aa9□□□□□ -0.97
LINC02388-201ENST00000550678 TEX2Q8IWB9 1127 aa9□□□□□ -0.97
LINC02388-201ENST00000550678 CC2D2BQ6DHV5 1058 aa8.99□□□□□ -0.97
LINC02388-201ENST00000550678 RGS22Q8NE09 1264 aa8.99□□□□□ -0.97
LINC02388-201ENST00000550678 TRIM41Q8WV44 630 aa8.99□□□□□ -0.97
LINC02388-201ENST00000550678 FAM177A1Q8N128 213 aaPredicted RBP8.99□□□□□ -0.97
LINC02388-201ENST00000550678 KCTD17Q8N5Z5 321 aa8.99□□□□□ -0.97
LINC02388-201ENST00000550678 MAPK8IP2Q13387 824 aaPredicted RBP8.97□□□□□ -0.97
LINC02388-201ENST00000550678 LMOD2Q6P5Q4 547 aa8.97□□□□□ -0.97
LINC02388-201ENST00000550678 YTHDC1Q96MU7 727 aaKnown RBP8.97□□□□□ -0.97
LINC02388-201ENST00000550678 MTMR7Q9Y216 660 aa8.97□□□□□ -0.97
LINC02388-201ENST00000550678 RBM25P49756 843 aaKnown RBP8.96□□□□□ -0.98
LINC02388-201ENST00000550678 SECISBP2LQ93073 1101 aaKnown RBP8.95□□□□□ -0.98
LINC02388-201ENST00000550678 PLCD4Q9BRC7 762 aa8.95□□□□□ -0.98
LINC02388-201ENST00000550678 CCER1Q8TC90 406 aaPredicted RBP8.95□□□□□ -0.98
LINC02388-201ENST00000550678 ZNF526Q8TF50 670 aaPredicted RBP8.95□□□□□ -0.98
LINC02388-201ENST00000550678 ARID4BQ4LE39 1312 aaPredicted RBP8.95□□□□□ -0.98
LINC02388-201ENST00000550678 FOXD4L5Q5VV16 416 aaPredicted RBP8.93□□□□□ -0.98
LINC02388-201ENST00000550678 IPO4Q8TEX9 1081 aaKnown RBP8.93□□□□□ -0.98
LINC02388-201ENST00000550678 FOXD4L4Q8WXT5 416 aaPredicted RBP8.93□□□□□ -0.98
LINC02388-201ENST00000550678 C1QBPQ07021 282 aaKnown RBP8.93□□□□□ -0.98
LINC02388-201ENST00000550678 SPOCK2Q92563 424 aa8.93□□□□□ -0.98
LINC02388-201ENST00000550678 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.92□□□□□ -0.98
LINC02388-201ENST00000550678 USP35Q9P2H5 1018 aa8.92□□□□□ -0.98
LINC02388-201ENST00000550678 ZNF316A6NFI3 1004 aaPredicted RBP8.91□□□□□ -0.98
LINC02388-201ENST00000550678 GRIPAP1Q4V328 841 aa8.9□□□□□ -0.98
LINC02388-201ENST00000550678 SUPT16HQ9Y5B9 1047 aaKnown RBP8.9□□□□□ -0.98
LINC02388-201ENST00000550678 PPM1GO15355 546 aaPredicted RBP8.9□□□□□ -0.99
LINC02388-201ENST00000550678 ARID3CA6NKF2 412 aa8.89□□□□□ -0.99
LINC02388-201ENST00000550678 WWC1Q8IX03 1113 aa8.89□□□□□ -0.99
LINC02388-201ENST00000550678 CCDC27Q2M243 656 aa8.88□□□□□ -0.99
LINC02388-201ENST00000550678 KCNG1Q9UIX4 513 aa8.88□□□□□ -0.99
LINC02388-201ENST00000550678 MYT1LQ9UL68 1186 aa8.88□□□□□ -0.99
LINC02388-201ENST00000550678 PTMSP20962 102 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms