RNA–Protein interactions for RNA: ENST00000546849.1

NPAS3-204, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 3

Gene NPAS3, Length 464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-204ENST00000546849 NPM1P06748 294 aaKnown RBP eCLIP15.41■□□□□ 0.06
NPAS3-204ENST00000546849 CIZ1Q9ULV3 898 aaPredicted RBP15.4■□□□□ 0.06
NPAS3-204ENST00000546849 ECM2O94769 699 aaPredicted RBP15.39■□□□□ 0.05
NPAS3-204ENST00000546849 PKD2Q13563 968 aa15.39■□□□□ 0.05
NPAS3-204ENST00000546849 SLC24A1O60721 1099 aa15.33■□□□□ 0.04
NPAS3-204ENST00000546849 PAK3O75914 559 aaPredicted RBP15.33■□□□□ 0.04
NPAS3-204ENST00000546849 GALR2O43603 387 aaPredicted RBP15.3■□□□□ 0.04
NPAS3-204ENST00000546849 PHF12Q96QT6 1004 aa15.3■□□□□ 0.04
NPAS3-204ENST00000546849 GSE1Q14687 1217 aa15.26■□□□□ 0.03
NPAS3-204ENST00000546849 LHX8Q68G74 356 aa15.26■□□□□ 0.03
NPAS3-204ENST00000546849 DCBLD2Q96PD2 775 aa15.26■□□□□ 0.03
NPAS3-204ENST00000546849 TRIM41Q8WV44 630 aa15.23■□□□□ 0.03
NPAS3-204ENST00000546849 DCAF8Q5TAQ9 597 aa15.21■□□□□ 0.03
NPAS3-204ENST00000546849 FAM212AQ96EL1 285 aa15.21■□□□□ 0.03
NPAS3-204ENST00000546849 NUBP1P53384 320 aa15.17■□□□□ 0.02
NPAS3-204ENST00000546849 TSPYL2Q9H2G4 693 aaPredicted RBP15.17■□□□□ 0.02
NPAS3-204ENST00000546849 CCDC61Q9Y6R9 512 aa15.13■□□□□ 0.01
NPAS3-204ENST00000546849 RGL2O15211 777 aa15.12■□□□□ 0.01
NPAS3-204ENST00000546849 MS4A3Q96HJ5 214 aa15.09■□□□□ 0.01
NPAS3-204ENST00000546849 RASEFQ8IZ41 740 aa15.08■□□□□ 0
NPAS3-204ENST00000546849 PELP1Q8IZL8 1130 aaKnown RBP15.03■□□□□ -0
NPAS3-204ENST00000546849 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.03■□□□□ -0
NPAS3-204ENST00000546849 KIF12Q96FN5 646 aa15.02■□□□□ -0
NPAS3-204ENST00000546849 TAOK2Q9UL54 1235 aa15.02■□□□□ -0
NPAS3-204ENST00000546849 PLCB2Q00722 1185 aa15□□□□□ -0.01
NPAS3-204ENST00000546849 ASTLQ6HA08 431 aaPredicted RBP14.99□□□□□ -0.01
NPAS3-204ENST00000546849 CHGAP10645 457 aaKnown RBP14.97□□□□□ -0.01
NPAS3-204ENST00000546849 ATMINO43313 823 aaPredicted RBP14.96□□□□□ -0.01
NPAS3-204ENST00000546849 BBXQ8WY36 941 aaPredicted RBP14.96□□□□□ -0.01
NPAS3-204ENST00000546849 POTEB2H3BUK9 544 aa14.94□□□□□ -0.02
NPAS3-204ENST00000546849 MAP3K13O43283 966 aa14.94□□□□□ -0.02
NPAS3-204ENST00000546849 RIOK3O14730 519 aaKnown RBP14.93□□□□□ -0.02
NPAS3-204ENST00000546849 PYGBP11216 843 aa14.91□□□□□ -0.02
NPAS3-204ENST00000546849 HAP1P54257 671 aaPredicted RBP14.89□□□□□ -0.03
NPAS3-204ENST00000546849 TRPC6Q9Y210 931 aa14.89□□□□□ -0.03
NPAS3-204ENST00000546849 CHRM1P11229 460 aaPredicted RBP14.88□□□□□ -0.03
NPAS3-204ENST00000546849 RNF25Q96BH1 459 aaPredicted RBP14.87□□□□□ -0.03
NPAS3-204ENST00000546849 ATN1P54259 1190 aaPredicted RBP14.86□□□□□ -0.03
NPAS3-204ENST00000546849 VGFO15240 615 aaPredicted RBP14.84□□□□□ -0.03
NPAS3-204ENST00000546849 BMP2KQ9NSY1 1161 aaPredicted RBP14.84□□□□□ -0.03
NPAS3-204ENST00000546849 METRNQ9UJH8 293 aa14.84□□□□□ -0.03
NPAS3-204ENST00000546849 C7P10643 843 aa14.83□□□□□ -0.04
NPAS3-204ENST00000546849 PAXIP1Q6ZW49 1069 aaPredicted RBP14.83□□□□□ -0.04
NPAS3-204ENST00000546849 SLC39A7Q92504 469 aa14.83□□□□□ -0.04
NPAS3-204ENST00000546849 OTUD5Q96G74 571 aa14.83□□□□□ -0.04
NPAS3-204ENST00000546849 CFAP44Q96MT7 982 aa14.83□□□□□ -0.04
NPAS3-204ENST00000546849 HS6ST3Q8IZP7 471 aa14.82□□□□□ -0.04
NPAS3-204ENST00000546849 TIE1P35590 1138 aa14.8□□□□□ -0.04
NPAS3-204ENST00000546849 SGIP1Q9BQI5 828 aa14.8□□□□□ -0.04
NPAS3-204ENST00000546849 STK25O00506 426 aa14.79□□□□□ -0.04
NPAS3-204ENST00000546849 SPRYD3Q8NCJ5 442 aa14.78□□□□□ -0.04
NPAS3-204ENST00000546849 PCDHB13Q9Y5F0 798 aa14.77□□□□□ -0.05
NPAS3-204ENST00000546849 ZNF467Q7Z7K2 595 aaPredicted RBP14.76□□□□□ -0.05
NPAS3-204ENST00000546849 POTEJP0CG39 1038 aa14.74□□□□□ -0.05
NPAS3-204ENST00000546849 TTLL13PA6NNM8 815 aa14.73□□□□□ -0.05
NPAS3-204ENST00000546849 IFNL1Q8IU54 200 aa14.72□□□□□ -0.05
NPAS3-204ENST00000546849 POTEFA5A3E0 1075 aa14.71□□□□□ -0.05
NPAS3-204ENST00000546849 STK24Q9Y6E0 443 aa14.71□□□□□ -0.05
NPAS3-204ENST00000546849 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.69□□□□□ -0.06
NPAS3-204ENST00000546849 ZFP91Q96JP5 570 aaPredicted RBP14.69□□□□□ -0.06
NPAS3-204ENST00000546849 BCL11BQ9C0K0 894 aaPredicted RBP14.68□□□□□ -0.06
NPAS3-204ENST00000546849 PDAP1Q13442 181 aaKnown RBP14.63□□□□□ -0.07
NPAS3-204ENST00000546849 PCDHB8Q9UN66 801 aa14.63□□□□□ -0.07
NPAS3-204ENST00000546849 TRIM35Q9UPQ4 493 aa14.63□□□□□ -0.07
NPAS3-204ENST00000546849 DNAJC5Q9H3Z4 198 aa14.6□□□□□ -0.07
NPAS3-204ENST00000546849 COLQQ9Y215 455 aaPredicted RBP14.6□□□□□ -0.07
NPAS3-204ENST00000546849 RYDENQ9NUL5 291 aaKnown RBP14.58□□□□□ -0.08
NPAS3-204ENST00000546849 VSIG10Q8N0Z9 540 aa14.57□□□□□ -0.08
NPAS3-204ENST00000546849 TMEM106CQ9BVX2 250 aa14.57□□□□□ -0.08
NPAS3-204ENST00000546849 PSEN1P49768 467 aa14.56□□□□□ -0.08
NPAS3-204ENST00000546849 MAMSTRQ6ZN01 415 aa14.56□□□□□ -0.08
NPAS3-204ENST00000546849 IER5LQ5T953 404 aa14.55□□□□□ -0.08
NPAS3-204ENST00000546849 SEC24BO95487 1268 aa14.53□□□□□ -0.08
NPAS3-204ENST00000546849 NKX1-1Q15270 411 aaPredicted RBP14.52□□□□□ -0.09
NPAS3-204ENST00000546849 SCUBE2Q9NQ36 999 aa14.49□□□□□ -0.09
NPAS3-204ENST00000546849 TSHZ2Q9NRE2 1034 aa14.47□□□□□ -0.09
NPAS3-204ENST00000546849 GTPBP6O43824 516 aaPredicted RBP14.45□□□□□ -0.1
NPAS3-204ENST00000546849 IRX5P78411 483 aaPredicted RBP14.43□□□□□ -0.1
NPAS3-204ENST00000546849 GOLGA2Q08379 1002 aa14.4□□□□□ -0.1
NPAS3-204ENST00000546849 CABP2Q9NPB3 220 aa14.4□□□□□ -0.1
NPAS3-204ENST00000546849 PLCG2P16885 1265 aa14.37□□□□□ -0.11
NPAS3-204ENST00000546849 POTEMA6NI47 508 aa14.35□□□□□ -0.11
NPAS3-204ENST00000546849 LCE2DQ5TA82 110 aaPredicted RBP14.34□□□□□ -0.11
NPAS3-204ENST00000546849 OCEL1Q9H607 264 aa14.34□□□□□ -0.11
NPAS3-204ENST00000546849 KDM2AQ9Y2K7 1162 aa14.34□□□□□ -0.11
NPAS3-204ENST00000546849 POTEGQ6S5H5 508 aa14.32□□□□□ -0.12
NPAS3-204ENST00000546849 EFCAB3Q8N7B9 438 aa14.31□□□□□ -0.12
NPAS3-204ENST00000546849 FAM163AQ96GL9 167 aaPredicted RBP14.3□□□□□ -0.12
NPAS3-204ENST00000546849 SOX12O15370 315 aa14.29□□□□□ -0.12
NPAS3-204ENST00000546849 NLRP6P59044 892 aa14.29□□□□□ -0.12
NPAS3-204ENST00000546849 BCANQ96GW7 911 aa14.28□□□□□ -0.12
NPAS3-204ENST00000546849 MFRPQ9BY79 579 aa14.27□□□□□ -0.13
NPAS3-204ENST00000546849 MKRN3Q13064 507 aaKnown RBP14.26□□□□□ -0.13
NPAS3-204ENST00000546849 PDCD7Q8N8D1 485 aaKnown RBP14.23□□□□□ -0.13
NPAS3-204ENST00000546849 SLAIN1Q8ND83 568 aa14.23□□□□□ -0.13
NPAS3-204ENST00000546849 PHF8Q9UPP1 1060 aa14.22□□□□□ -0.13
NPAS3-204ENST00000546849 ILDR1Q86SU0 546 aaPredicted RBP14.15□□□□□ -0.14
NPAS3-204ENST00000546849 FBXO22Q8NEZ5 403 aa14.15□□□□□ -0.14
NPAS3-204ENST00000546849 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.15□□□□□ -0.14
NPAS3-204ENST00000546849 PLSCR2Q9NRY7 297 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms