RNA–Protein interactions for RNA: ENST00000546590.2

TMTC2-202, Transcript of transmembrane and tetratricopeptide repeat containing 2, humanhuman

TSL 1 (best)

Gene TMTC2, Length 4,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMTC2-202ENST00000546590 SYNJ1O43426 1573 aa11.86□□□□□ -0.51
TMTC2-202ENST00000546590 TDRD9Q8NDG6 1382 aaKnown RBP11.85□□□□□ -0.51
TMTC2-202ENST00000546590 RAB3GAP2Q9H2M9 1393 aa11.83□□□□□ -0.52
TMTC2-202ENST00000546590 DNAJC5BQ9UF47 199 aa11.81□□□□□ -0.52
TMTC2-202ENST00000546590 KDM2AQ9Y2K7 1162 aa11.81□□□□□ -0.52
TMTC2-202ENST00000546590 DHX57Q6P158 1386 aaKnown RBP11.81□□□□□ -0.52
TMTC2-202ENST00000546590 SENP3Q9H4L4 574 aaPredicted RBP11.8□□□□□ -0.52
TMTC2-202ENST00000546590 SUPT16HQ9Y5B9 1047 aaKnown RBP11.8□□□□□ -0.52
TMTC2-202ENST00000546590 FHOD3Q2V2M9 1422 aa11.8□□□□□ -0.52
TMTC2-202ENST00000546590 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.76□□□□□ -0.53
TMTC2-202ENST00000546590 KIF21BO75037 1637 aa11.75□□□□□ -0.53
TMTC2-202ENST00000546590 ARAP1Q96P48 1450 aa11.74□□□□□ -0.53
TMTC2-202ENST00000546590 SLC4A1APQ9BWU0 796 aaKnown RBP11.74□□□□□ -0.53
TMTC2-202ENST00000546590 RAD54L2Q9Y4B4 1467 aa11.72□□□□□ -0.53
TMTC2-202ENST00000546590 EIF4G1Q04637 1599 aaKnown RBP11.71□□□□□ -0.53
TMTC2-202ENST00000546590 MRS2Q9HD23 443 aa11.71□□□□□ -0.53
TMTC2-202ENST00000546590 IGF1RP08069 1367 aa11.71□□□□□ -0.54
TMTC2-202ENST00000546590 BICRAQ9NZM4 1560 aa11.7□□□□□ -0.54
TMTC2-202ENST00000546590 RGL3Q3MIN7 710 aa11.69□□□□□ -0.54
TMTC2-202ENST00000546590 CHMP7Q8WUX9 453 aaPredicted RBP11.69□□□□□ -0.54
TMTC2-202ENST00000546590 SETD5Q9C0A6 1442 aa11.69□□□□□ -0.54
TMTC2-202ENST00000546590 CADPSQ9ULU8 1353 aa11.68□□□□□ -0.54
TMTC2-202ENST00000546590 PHLDB1Q86UU1 1377 aa11.68□□□□□ -0.54
TMTC2-202ENST00000546590 EIF4G2P78344 907 aaKnown RBP eCLIP11.65□□□□□ -0.54
TMTC2-202ENST00000546590 NESP48681 1621 aa11.64□□□□□ -0.55
TMTC2-202ENST00000546590 PPP1R15AO75807 674 aaPredicted RBP11.64□□□□□ -0.55
TMTC2-202ENST00000546590 HSPA5P11021 654 aaKnown RBP11.63□□□□□ -0.55
TMTC2-202ENST00000546590 CDK11AQ9UQ88 783 aaPredicted RBP11.63□□□□□ -0.55
TMTC2-202ENST00000546590 FGD5Q6ZNL6 1462 aa11.63□□□□□ -0.55
TMTC2-202ENST00000546590 UNC13AQ9UPW8 1703 aa11.62□□□□□ -0.55
TMTC2-202ENST00000546590 ARHGAP35Q9NRY4 1499 aa11.62□□□□□ -0.55
TMTC2-202ENST00000546590 NPM2Q86SE8 214 aaKnown RBP11.62□□□□□ -0.55
TMTC2-202ENST00000546590 CUX1P39880 1505 aa11.62□□□□□ -0.55
TMTC2-202ENST00000546590 CFDP1Q9UEE9 299 aaPredicted RBP11.61□□□□□ -0.55
TMTC2-202ENST00000546590 CLSPNQ9HAW4 1339 aa11.6□□□□□ -0.55
TMTC2-202ENST00000546590 ZNF644Q9H582 1327 aaPredicted RBP11.6□□□□□ -0.55
TMTC2-202ENST00000546590 B4GALNT3Q6L9W6 998 aa11.59□□□□□ -0.55
TMTC2-202ENST00000546590 BCL11AQ9H165 835 aa11.59□□□□□ -0.55
TMTC2-202ENST00000546590 FHAD1B1AJZ9 1412 aa11.59□□□□□ -0.55
TMTC2-202ENST00000546590 L3MBTL2Q969R5 705 aa11.58□□□□□ -0.56
TMTC2-202ENST00000546590 FANCD2Q9BXW9 1451 aa11.58□□□□□ -0.56
TMTC2-202ENST00000546590 TSHZ2Q9NRE2 1034 aa11.58□□□□□ -0.56
TMTC2-202ENST00000546590 MYT1Q01538 1121 aa11.57□□□□□ -0.56
TMTC2-202ENST00000546590 PRXQ9BXM0 1461 aa11.57□□□□□ -0.56
TMTC2-202ENST00000546590 TMC1Q8TDI8 760 aa11.56□□□□□ -0.56
TMTC2-202ENST00000546590 MPHOSPH9Q99550 1183 aa11.56□□□□□ -0.56
TMTC2-202ENST00000546590 CHGAP10645 457 aaKnown RBP11.55□□□□□ -0.56
TMTC2-202ENST00000546590 TSPY4P0CV99 314 aa11.54□□□□□ -0.56
TMTC2-202ENST00000546590 TSPY10P0CW01 314 aa11.54□□□□□ -0.56
TMTC2-202ENST00000546590 NBR1Q14596 966 aa11.53□□□□□ -0.56
TMTC2-202ENST00000546590 NCAPD3P42695 1498 aa11.53□□□□□ -0.56
TMTC2-202ENST00000546590 TOP2BQ02880 1626 aa11.51□□□□□ -0.57
TMTC2-202ENST00000546590 PLEKHD1A6NEE1 506 aa11.5□□□□□ -0.57
TMTC2-202ENST00000546590 PKD2Q13563 968 aa11.5□□□□□ -0.57
TMTC2-202ENST00000546590 DCAF11Q8TEB1 546 aa11.5□□□□□ -0.57
TMTC2-202ENST00000546590 CARD11Q9BXL7 1154 aa11.5□□□□□ -0.57
TMTC2-202ENST00000546590 PDS5BQ9NTI5 1447 aa11.5□□□□□ -0.57
TMTC2-202ENST00000546590 CFTRP13569 1480 aa11.5□□□□□ -0.57
TMTC2-202ENST00000546590 CCDC184Q52MB2 194 aa11.5□□□□□ -0.57
TMTC2-202ENST00000546590 AQRO60306 1485 aaKnown RBP eCLIP11.49□□□□□ -0.57
TMTC2-202ENST00000546590 CCDC136Q96JN2 1154 aa11.49□□□□□ -0.57
TMTC2-202ENST00000546590 LRRC9Q6ZRR7 1453 aa11.49□□□□□ -0.57
TMTC2-202ENST00000546590 CC2D1BQ5T0F9 858 aaKnown RBP11.48□□□□□ -0.57
TMTC2-202ENST00000546590 RBM19Q9Y4C8 960 aaKnown RBP11.48□□□□□ -0.57
TMTC2-202ENST00000546590 HNRNPMP52272 730 aaKnown RBP eCLIP11.47□□□□□ -0.57
TMTC2-202ENST00000546590 RRBP1Q9P2E9 1410 aaKnown RBP11.46□□□□□ -0.58
TMTC2-202ENST00000546590 WDR97A6NE52 1622 aa11.45□□□□□ -0.58
TMTC2-202ENST00000546590 FMN1Q68DA7 1419 aa11.45□□□□□ -0.58
TMTC2-202ENST00000546590 CCDC18Q5T9S5 1454 aa11.44□□□□□ -0.58
TMTC2-202ENST00000546590 PLPPR3Q6T4P5 718 aa11.43□□□□□ -0.58
TMTC2-202ENST00000546590 ERCC6Q03468 1493 aa11.42□□□□□ -0.58
TMTC2-202ENST00000546590 FGD6Q6ZV73 1430 aa11.42□□□□□ -0.58
TMTC2-202ENST00000546590 WASHC2AQ641Q2 1341 aa11.41□□□□□ -0.58
TMTC2-202ENST00000546590 TNNT2P45379 298 aaPredicted RBP11.41□□□□□ -0.58
TMTC2-202ENST00000546590 POLA1P09884 1462 aaPredicted RBP11.4□□□□□ -0.59
TMTC2-202ENST00000546590 C11orf95C9JLR9 678 aaPredicted RBP11.39□□□□□ -0.59
TMTC2-202ENST00000546590 CCER2I3L3R5 266 aa11.39□□□□□ -0.59
TMTC2-202ENST00000546590 GAPVD1Q14C86 1478 aa11.39□□□□□ -0.59
TMTC2-202ENST00000546590 ERICH3Q5RHP9 1530 aa11.39□□□□□ -0.59
TMTC2-202ENST00000546590 ANP32EQ9BTT0 268 aa11.39□□□□□ -0.59
TMTC2-202ENST00000546590 DAXXQ9UER7 740 aaPredicted RBP11.39□□□□□ -0.59
TMTC2-202ENST00000546590 NBPF8Q3BBV2 869 aa11.39□□□□□ -0.59
TMTC2-202ENST00000546590 NUP155O75694 1391 aa11.38□□□□□ -0.59
TMTC2-202ENST00000546590 NEUROD2Q15784 382 aa11.38□□□□□ -0.59
TMTC2-202ENST00000546590 CC2D2AQ9P2K1 1620 aa11.37□□□□□ -0.59
TMTC2-202ENST00000546590 JPH4Q96JJ6 628 aa11.37□□□□□ -0.59
TMTC2-202ENST00000546590 ST20-MTHFSA0A0A6YYL1 179 aa11.36□□□□□ -0.59
TMTC2-202ENST00000546590 RTL5Q5HYW3 569 aaPredicted RBP11.36□□□□□ -0.59
TMTC2-202ENST00000546590 TIMELESSQ9UNS1 1208 aa11.36□□□□□ -0.59
TMTC2-202ENST00000546590 NCOA2Q15596 1464 aa11.35□□□□□ -0.59
TMTC2-202ENST00000546590 PRKRIP1Q9H875 184 aaPredicted RBP11.35□□□□□ -0.59
TMTC2-202ENST00000546590 TIAM1Q13009 1591 aa11.35□□□□□ -0.59
TMTC2-202ENST00000546590 TOPBP1Q92547 1522 aa11.34□□□□□ -0.59
TMTC2-202ENST00000546590 CANXP27824 592 aaKnown RBP11.34□□□□□ -0.59
TMTC2-202ENST00000546590 ANP32AP39687 249 aaKnown RBP11.33□□□□□ -0.6
TMTC2-202ENST00000546590 PCF11O94913 1555 aaKnown RBP11.33□□□□□ -0.6
TMTC2-202ENST00000546590 PEG3Q9GZU2 1588 aa11.33□□□□□ -0.6
TMTC2-202ENST00000546590 PTPRKQ15262 1439 aa11.32□□□□□ -0.6
TMTC2-202ENST00000546590 MYOM3Q5VTT5 1437 aa11.32□□□□□ -0.6
TMTC2-202ENST00000546590 SAFB2Q14151 953 aaKnown RBP eCLIP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms