RNA–Protein interactions for RNA: ENST00000546048.5

MDM2-234, Transcript of MDM2 proto-oncogene, humanhuman

TSL 5

Gene MDM2, Length 363 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-234ENST00000546048 CCDC88BA6NC98 1476 aa9.31□□□□□ -0.92
MDM2-234ENST00000546048 LAMC3Q9Y6N6 1575 aa9.29□□□□□ -0.92
MDM2-234ENST00000546048 CFTRP13569 1480 aa9.28□□□□□ -0.92
MDM2-234ENST00000546048 PDS5BQ9NTI5 1447 aa9.27□□□□□ -0.93
MDM2-234ENST00000546048 SUPT5HO00267 1087 aaKnown RBP9.26□□□□□ -0.93
MDM2-234ENST00000546048 CUX2O14529 1486 aa9.25□□□□□ -0.93
MDM2-234ENST00000546048 THOC2Q8NI27 1593 aaKnown RBP9.24□□□□□ -0.93
MDM2-234ENST00000546048 PRKAR2AP13861 404 aaKnown RBP9.24□□□□□ -0.93
MDM2-234ENST00000546048 KIF21AQ7Z4S6 1674 aa9.23□□□□□ -0.93
MDM2-234ENST00000546048 FANCD2Q9BXW9 1451 aa9.23□□□□□ -0.93
MDM2-234ENST00000546048 PRR29P0C7W0 189 aa9.22□□□□□ -0.93
MDM2-234ENST00000546048 CHADLQ6NUI6 762 aa9.21□□□□□ -0.94
MDM2-234ENST00000546048 MRC2Q9UBG0 1479 aa9.21□□□□□ -0.94
MDM2-234ENST00000546048 URB2Q14146 1524 aaKnown RBP9.18□□□□□ -0.94
MDM2-234ENST00000546048 CEP164Q9UPV0 1460 aa9.18□□□□□ -0.94
MDM2-234ENST00000546048 WDR62O43379 1518 aa9.16□□□□□ -0.94
MDM2-234ENST00000546048 PROM2Q8N271 834 aa9.16□□□□□ -0.94
MDM2-234ENST00000546048 DNAJC5Q9H3Z4 198 aa9.15□□□□□ -0.94
MDM2-234ENST00000546048 HAX1O00165 279 aa9.14□□□□□ -0.95
MDM2-234ENST00000546048 STAG3Q9UJ98 1225 aa9.12□□□□□ -0.95
MDM2-234ENST00000546048 EVX2Q03828 476 aa9.09□□□□□ -0.95
MDM2-234ENST00000546048 FKBP8Q14318 412 aa9.09□□□□□ -0.95
MDM2-234ENST00000546048 SP7Q8TDD2 431 aaPredicted RBP9.09□□□□□ -0.95
MDM2-234ENST00000546048 CREBZFQ9NS37 354 aa9.08□□□□□ -0.96
MDM2-234ENST00000546048 TOPBP1Q92547 1522 aa9.08□□□□□ -0.96
MDM2-234ENST00000546048 ZNF608Q9ULD9 1512 aaPredicted RBP9.06□□□□□ -0.96
MDM2-234ENST00000546048 C19orf67A6NJJ6 358 aa9.06□□□□□ -0.96
MDM2-234ENST00000546048 FARP1Q9Y4F1 1045 aaPredicted RBP9.06□□□□□ -0.96
MDM2-234ENST00000546048 RAD54L2Q9Y4B4 1467 aa9.03□□□□□ -0.96
MDM2-234ENST00000546048 CUX1P39880 1505 aa9.02□□□□□ -0.97
MDM2-234ENST00000546048 DNMBPQ6XZF7 1577 aa9.01□□□□□ -0.97
MDM2-234ENST00000546048 AQRO60306 1485 aaKnown RBP eCLIP9.01□□□□□ -0.976e-7■■■□□ 19.2
MDM2-234ENST00000546048 POLA1P09884 1462 aaPredicted RBP9.01□□□□□ -0.97
MDM2-234ENST00000546048 PRDM2Q13029 1718 aa9□□□□□ -0.97
MDM2-234ENST00000546048 IFT140Q96RY7 1462 aa9□□□□□ -0.97
MDM2-234ENST00000546048 TDRD9Q8NDG6 1382 aaKnown RBP8.99□□□□□ -0.97
MDM2-234ENST00000546048 SOGA1O94964 1423 aa8.97□□□□□ -0.97
MDM2-234ENST00000546048 FGD5Q6ZNL6 1462 aa8.97□□□□□ -0.97
MDM2-234ENST00000546048 CD44P16070 742 aaKnown RBP8.97□□□□□ -0.97
MDM2-234ENST00000546048 ABCC8Q09428 1581 aa8.97□□□□□ -0.97
MDM2-234ENST00000546048 TARBP1Q13395 1621 aaKnown RBP8.97□□□□□ -0.97
MDM2-234ENST00000546048 MNX1P50219 401 aaPredicted RBP8.95□□□□□ -0.98
MDM2-234ENST00000546048 WRNQ14191 1432 aaPredicted RBP eCLIP8.91□□□□□ -0.98
MDM2-234ENST00000546048 SYNJ1O43426 1573 aa8.9□□□□□ -0.98
MDM2-234ENST00000546048 EIF4G3O43432 1585 aaKnown RBP8.9□□□□□ -0.98
MDM2-234ENST00000546048 GABBR2O75899 941 aa8.87□□□□□ -0.99
MDM2-234ENST00000546048 SNAPC4Q5SXM2 1469 aa8.87□□□□□ -0.99
MDM2-234ENST00000546048 ABCA10Q8WWZ4 1543 aa8.86□□□□□ -0.99
MDM2-234ENST00000546048 NPM1P06748 294 aaKnown RBP eCLIP8.86□□□□□ -0.99
MDM2-234ENST00000546048 MIER1Q8N108 512 aa8.86□□□□□ -0.99
MDM2-234ENST00000546048 ZRANB1Q9UGI0 708 aa8.86□□□□□ -0.99
MDM2-234ENST00000546048 TOP2BQ02880 1626 aa8.85□□□□□ -0.99
MDM2-234ENST00000546048 GAPVD1Q14C86 1478 aa8.84□□□□□ -0.99
MDM2-234ENST00000546048 ZNF579Q8NAF0 562 aaKnown RBP8.84□□□□□ -0.99
MDM2-234ENST00000546048 TRIM41Q8WV44 630 aa8.84□□□□□ -0.99
MDM2-234ENST00000546048 GRIN2BQ13224 1484 aa8.83□□□□□ -1
MDM2-234ENST00000546048 PLCD3Q8N3E9 789 aa8.83□□□□□ -1
MDM2-234ENST00000546048 CHMP7Q8WUX9 453 aaPredicted RBP8.82□□□□□ -1
MDM2-234ENST00000546048 WDR97A6NE52 1622 aa8.82□□□□□ -1
MDM2-234ENST00000546048 BIVM-ERCC5R4GMW8 1640 aa8.82□□□□□ -1
MDM2-234ENST00000546048 ABCA5Q8WWZ7 1642 aa8.8□□□□□ -1
MDM2-234ENST00000546048 PLEKHG5O94827 1062 aa8.8□□□□□ -1
MDM2-234ENST00000546048 PHF12Q96QT6 1004 aa8.8□□□□□ -1
MDM2-234ENST00000546048 MAGI1Q96QZ7 1491 aaPredicted RBP8.79□□□□□ -1
MDM2-234ENST00000546048 PAK3O75914 559 aaPredicted RBP8.79□□□□□ -1
MDM2-234ENST00000546048 SYNJ2O15056 1496 aa8.78□□□□□ -1
MDM2-234ENST00000546048 CHD1O14646 1710 aa8.78□□□□□ -1
MDM2-234ENST00000546048 FBXO3Q9UK99 471 aa8.78□□□□□ -1
MDM2-234ENST00000546048 IGF1RP08069 1367 aa8.77□□□□□ -1.01
MDM2-234ENST00000546048 ARHGEF11O15085 1522 aa8.76□□□□□ -1.01
MDM2-234ENST00000546048 CYB5RLQ6IPT4 315 aa8.76□□□□□ -1.01
MDM2-234ENST00000546048 RASEFQ8IZ41 740 aa8.76□□□□□ -1.01
MDM2-234ENST00000546048 TSPYL2Q9H2G4 693 aaPredicted RBP8.76□□□□□ -1.01
MDM2-234ENST00000546048 RIMBP3CA6NJZ7 1639 aa8.75□□□□□ -1.01
MDM2-234ENST00000546048 RIMBP3BA6NNM3 1639 aa8.75□□□□□ -1.01
MDM2-234ENST00000546048 RIMBP3Q9UFD9 1639 aa8.75□□□□□ -1.01
MDM2-234ENST00000546048 CLASP1Q7Z460 1538 aa8.75□□□□□ -1.01
MDM2-234ENST00000546048 RUSC2Q8N2Y8 1516 aa8.75□□□□□ -1.01
MDM2-234ENST00000546048 VASPP50552 380 aaPredicted RBP8.74□□□□□ -1.01
MDM2-234ENST00000546048 FHAD1B1AJZ9 1412 aa8.73□□□□□ -1.01
MDM2-234ENST00000546048 PBRM1Q86U86 1689 aa8.73□□□□□ -1.01
MDM2-234ENST00000546048 GRIN2AQ12879 1464 aa8.73□□□□□ -1.01
MDM2-234ENST00000546048 ARAP1Q96P48 1450 aa8.73□□□□□ -1.01
MDM2-234ENST00000546048 GALR2O43603 387 aaPredicted RBP8.73□□□□□ -1.01
MDM2-234ENST00000546048 ADAMTS12P58397 1594 aa8.73□□□□□ -1.01
MDM2-234ENST00000546048 NUP160Q12769 1436 aa8.72□□□□□ -1.01
MDM2-234ENST00000546048 ZBTB47Q9UFB7 747 aaPredicted RBP8.72□□□□□ -1.01
MDM2-234ENST00000546048 ERICH3Q5RHP9 1530 aa8.71□□□□□ -1.01
MDM2-234ENST00000546048 CEP170Q5SW79 1584 aa8.71□□□□□ -1.02
MDM2-234ENST00000546048 ERCC6L2Q5T890 1561 aa8.71□□□□□ -1.02
MDM2-234ENST00000546048 POTEIP0CG38 1075 aa8.71□□□□□ -1.02
MDM2-234ENST00000546048 CLCN6P51797 869 aa8.71□□□□□ -1.02
MDM2-234ENST00000546048 CCDC61Q9Y6R9 512 aa8.71□□□□□ -1.02
MDM2-234ENST00000546048 KIF27Q86VH2 1401 aa8.71□□□□□ -1.02
MDM2-234ENST00000546048 NUBP1P53384 320 aa8.7□□□□□ -1.02
MDM2-234ENST00000546048 CARMIL1Q5VZK9 1371 aa8.68□□□□□ -1.02
MDM2-234ENST00000546048 MS4A3Q96HJ5 214 aa8.67□□□□□ -1.02
MDM2-234ENST00000546048 JPH4Q96JJ6 628 aa8.66□□□□□ -1.02
MDM2-234ENST00000546048 DCBLD2Q96PD2 775 aa8.65□□□□□ -1.02
MDM2-234ENST00000546048 PRG4Q92954 1404 aaPredicted RBP8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms