RNA–Protein interactions for RNA: ENST00000545718.2

SCAP-215, Transcript of SREBF chaperone, humanhuman

TSL 5 BASIC

Gene SCAP, Length 2,950 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-215ENST00000545718 POLA1P09884 1462 aaPredicted RBP22.82■■□□□ 1.24
SCAP-215ENST00000545718 TOPBP1Q92547 1522 aa22.81■■□□□ 1.24
SCAP-215ENST00000545718 FHOD3Q2V2M9 1422 aa22.81■■□□□ 1.24
SCAP-215ENST00000545718 TIAM1Q13009 1591 aa22.79■■□□□ 1.24
SCAP-215ENST00000545718 DNMBPQ6XZF7 1577 aa22.78■■□□□ 1.24
SCAP-215ENST00000545718 FHAD1B1AJZ9 1412 aa22.77■■□□□ 1.24
SCAP-215ENST00000545718 RAB3GAP2Q9H2M9 1393 aa22.77■■□□□ 1.24
SCAP-215ENST00000545718 PHLDB1Q86UU1 1377 aa22.76■■□□□ 1.23
SCAP-215ENST00000545718 LRRC9Q6ZRR7 1453 aa22.75■■□□□ 1.23
SCAP-215ENST00000545718 TDRD9Q8NDG6 1382 aaKnown RBP22.75■■□□□ 1.23
SCAP-215ENST00000545718 ABCA10Q8WWZ4 1543 aa22.74■■□□□ 1.23
SCAP-215ENST00000545718 PCF11O94913 1555 aaKnown RBP22.69■■□□□ 1.22
SCAP-215ENST00000545718 SETD5Q9C0A6 1442 aa22.64■■□□□ 1.22
SCAP-215ENST00000545718 MAP3K1Q13233 1512 aa22.64■■□□□ 1.22
SCAP-215ENST00000545718 URB2Q14146 1524 aaKnown RBP22.64■■□□□ 1.22
SCAP-215ENST00000545718 SIN3AQ96ST3 1273 aa22.62■■□□□ 1.21
SCAP-215ENST00000545718 MTUS2Q5JR59 1369 aa22.56■■□□□ 1.2
SCAP-215ENST00000545718 PELP1Q8IZL8 1130 aaKnown RBP22.56■■□□□ 1.2
SCAP-215ENST00000545718 PDS5BQ9NTI5 1447 aa22.56■■□□□ 1.2
SCAP-215ENST00000545718 LAMC3Q9Y6N6 1575 aa22.56■■□□□ 1.2
SCAP-215ENST00000545718 CASKIN1Q8WXD9 1431 aa22.55■■□□□ 1.2
SCAP-215ENST00000545718 CUL7Q14999 1698 aa22.55■■□□□ 1.2
SCAP-215ENST00000545718 GAPVD1Q14C86 1478 aa22.55■■□□□ 1.2
SCAP-215ENST00000545718 FYCO1Q9BQS8 1478 aa22.55■■□□□ 1.2
SCAP-215ENST00000545718 EFCAB5A4FU69 1503 aa22.53■■□□□ 1.2
SCAP-215ENST00000545718 FMN1Q68DA7 1419 aa22.52■■□□□ 1.2
SCAP-215ENST00000545718 MAPKBP1O60336 1514 aa22.52■■□□□ 1.2
SCAP-215ENST00000545718 CFAP43Q8NDM7 1665 aa22.52■■□□□ 1.2
SCAP-215ENST00000545718 ARID3CA6NKF2 412 aa22.49■■□□□ 1.19
SCAP-215ENST00000545718 CTTNBP2Q8WZ74 1663 aa22.48■■□□□ 1.19
SCAP-215ENST00000545718 HIRIP3Q9BW71 556 aaPredicted RBP22.45■■□□□ 1.18
SCAP-215ENST00000545718 AQRO60306 1485 aaKnown RBP eCLIP22.42■■□□□ 1.182e-9■■■■□ 25.7
SCAP-215ENST00000545718 FGD6Q6ZV73 1430 aa22.42■■□□□ 1.18
SCAP-215ENST00000545718 KIF21AQ7Z4S6 1674 aa22.4■■□□□ 1.18
SCAP-215ENST00000545718 ABCA5Q8WWZ7 1642 aa22.4■■□□□ 1.18
SCAP-215ENST00000545718 SNAPC4Q5SXM2 1469 aa22.39■■□□□ 1.18
SCAP-215ENST00000545718 DDX10Q13206 875 aaKnown RBP22.39■■□□□ 1.18
SCAP-215ENST00000545718 WDR97A6NE52 1622 aa22.39■■□□□ 1.18
SCAP-215ENST00000545718 CHIC2Q9UKJ5 165 aa22.36■■□□□ 1.17
SCAP-215ENST00000545718 KCNH8Q96L42 1107 aa22.35■■□□□ 1.17
SCAP-215ENST00000545718 NCOA2Q15596 1464 aa22.32■■□□□ 1.16
SCAP-215ENST00000545718 RRP7BPQ9NSQ0 103 aa22.32■■□□□ 1.16
SCAP-215ENST00000545718 PTPRKQ15262 1439 aa22.31■■□□□ 1.16
SCAP-215ENST00000545718 TONSLQ96HA7 1378 aa22.29■■□□□ 1.16
SCAP-215ENST00000545718 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.29■■□□□ 1.161e-9■■■■■ 28.3
SCAP-215ENST00000545718 SAMD9Q5K651 1589 aa22.29■■□□□ 1.16
SCAP-215ENST00000545718 CCDC18Q5T9S5 1454 aa22.29■■□□□ 1.16
SCAP-215ENST00000545718 GRIN2BQ13224 1484 aa22.28■■□□□ 1.16
SCAP-215ENST00000545718 MYOM3Q5VTT5 1437 aa22.28■■□□□ 1.16
SCAP-215ENST00000545718 PPP1R15AO75807 674 aaPredicted RBP22.27■■□□□ 1.16
SCAP-215ENST00000545718 TARBP1Q13395 1621 aaKnown RBP22.25■■□□□ 1.15
SCAP-215ENST00000545718 TRIM52Q96A61 297 aa22.25■■□□□ 1.15
SCAP-215ENST00000545718 LRRIQ1Q96JM4 1722 aa22.23■■□□□ 1.15
SCAP-215ENST00000545718 TIMELESSQ9UNS1 1208 aa22.22■■□□□ 1.15
SCAP-215ENST00000545718 HFM1A2PYH4 1435 aa22.21■■□□□ 1.15
SCAP-215ENST00000545718 SUPT6HQ7KZ85 1726 aaKnown RBP22.19■■□□□ 1.14
SCAP-215ENST00000545718 NAIPQ13075 1403 aa22.18■■□□□ 1.14
SCAP-215ENST00000545718 EHBP1L1Q8N3D4 1523 aa22.18■■□□□ 1.14
SCAP-215ENST00000545718 UACAQ9BZF9 1416 aa22.17■■□□□ 1.14
SCAP-215ENST00000545718 MAGI3Q5TCQ9 1506 aa22.17■■□□□ 1.14
SCAP-215ENST00000545718 MRC2Q9UBG0 1479 aa22.17■■□□□ 1.14
SCAP-215ENST00000545718 ZNF608Q9ULD9 1512 aaPredicted RBP22.15■■□□□ 1.14
SCAP-215ENST00000545718 IQGAP2Q13576 1575 aa22.15■■□□□ 1.14
SCAP-215ENST00000545718 CDK13Q14004 1512 aaKnown RBP22.15■■□□□ 1.14
SCAP-215ENST00000545718 PTPN23Q9H3S7 1636 aa22.15■■□□□ 1.14
SCAP-215ENST00000545718 PBRM1Q86U86 1689 aa22.14■■□□□ 1.13
SCAP-215ENST00000545718 FBLN2P98095 1184 aa22.14■■□□□ 1.13
SCAP-215ENST00000545718 EPRSP07814 1512 aaKnown RBP22.12■■□□□ 1.13
SCAP-215ENST00000545718 THOC2Q8NI27 1593 aaKnown RBP22.11■■□□□ 1.13
SCAP-215ENST00000545718 UGGT2Q9NYU1 1516 aa22.11■■□□□ 1.13
SCAP-215ENST00000545718 ADAMTS12P58397 1594 aa22.09■■□□□ 1.13
SCAP-215ENST00000545718 ANP32CO43423 234 aa22.09■■□□□ 1.13
SCAP-215ENST00000545718 SUPT16HQ9Y5B9 1047 aaKnown RBP22.09■■□□□ 1.13
SCAP-215ENST00000545718 HECW1Q76N89 1606 aa22.09■■□□□ 1.13
SCAP-215ENST00000545718 FOXD1Q16676 465 aa22.08■■□□□ 1.13
SCAP-215ENST00000545718 ERCC6Q03468 1493 aa22.06■■□□□ 1.12
SCAP-215ENST00000545718 CHMP7Q8WUX9 453 aaPredicted RBP22.02■■□□□ 1.12
SCAP-215ENST00000545718 ZNF644Q9H582 1327 aaPredicted RBP22.02■■□□□ 1.12
SCAP-215ENST00000545718 IFT140Q96RY7 1462 aa22.02■■□□□ 1.12
SCAP-215ENST00000545718 MPHOSPH9Q99550 1183 aa22■■□□□ 1.11
SCAP-215ENST00000545718 ARHGEF11O15085 1522 aa22■■□□□ 1.11
SCAP-215ENST00000545718 BCANQ96GW7 911 aa21.99■■□□□ 1.11
SCAP-215ENST00000545718 ZNF777Q9ULD5 760 aaPredicted RBP21.98■■□□□ 1.11
SCAP-215ENST00000545718 WDR62O43379 1518 aa21.98■■□□□ 1.11
SCAP-215ENST00000545718 CDK11AQ9UQ88 783 aaPredicted RBP21.97■■□□□ 1.11
SCAP-215ENST00000545718 TCOF1Q13428 1488 aaKnown RBP21.95■■□□□ 1.1
SCAP-215ENST00000545718 KIAA0586Q9BVV6 1533 aa21.95■■□□□ 1.1
SCAP-215ENST00000545718 KDM6BO15054 1643 aa21.93■■□□□ 1.1
SCAP-215ENST00000545718 MIA2Q96PC5 1412 aa21.93■■□□□ 1.1
SCAP-215ENST00000545718 HSPA5P11021 654 aaKnown RBP21.92■■□□□ 1.1
SCAP-215ENST00000545718 DISP1Q96F81 1524 aa21.91■■□□□ 1.1
SCAP-215ENST00000545718 GRIN2AQ12879 1464 aa21.91■■□□□ 1.1
SCAP-215ENST00000545718 L3MBTL2Q969R5 705 aa21.91■■□□□ 1.1
SCAP-215ENST00000545718 SLC4A1APQ9BWU0 796 aaKnown RBP21.9■■□□□ 1.1
SCAP-215ENST00000545718 CFDP1Q9UEE9 299 aaPredicted RBP21.89■■□□□ 1.1
SCAP-215ENST00000545718 NUP153P49790 1475 aaKnown RBP21.89■■□□□ 1.09
SCAP-215ENST00000545718 CCER2I3L3R5 266 aa21.88■■□□□ 1.09
SCAP-215ENST00000545718 FKBP8Q14318 412 aa21.88■■□□□ 1.09
SCAP-215ENST00000545718 KIAA0556O60303 1618 aa21.88■■□□□ 1.09
SCAP-215ENST00000545718 PRG4Q92954 1404 aaPredicted RBP21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 161.2 ms