RNA–Protein interactions for RNA: ENST00000543464.6

CPD-202, Transcript of carboxypeptidase D, humanhuman

TSL 2 BASIC

Gene CPD, Length 4,007 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPD-202ENST00000543464 CDC42BPAQ5VT25 1732 aa5.59□□□□□ -1.51
CPD-202ENST00000543464 IQGAP2Q13576 1575 aa5.59□□□□□ -1.51
CPD-202ENST00000543464 AQRO60306 1485 aaKnown RBP eCLIP5.59□□□□□ -1.514e-6■■■■■ 34.1
CPD-202ENST00000543464 NUP160Q12769 1436 aa5.58□□□□□ -1.52
CPD-202ENST00000543464 CEP162Q5TB80 1403 aa5.58□□□□□ -1.52
CPD-202ENST00000543464 ABCA8O94911 1581 aa5.58□□□□□ -1.52
CPD-202ENST00000543464 KDM5BQ9UGL1 1544 aa5.57□□□□□ -1.52
CPD-202ENST00000543464 ERCC6L2Q5T890 1561 aa5.57□□□□□ -1.52
CPD-202ENST00000543464 DENND4BO75064 1496 aaPredicted RBP5.57□□□□□ -1.52
CPD-202ENST00000543464 IFT140Q96RY7 1462 aa5.56□□□□□ -1.52
CPD-202ENST00000543464 GCC2Q8IWJ2 1684 aa5.56□□□□□ -1.52
CPD-202ENST00000543464 CDC42BPBQ9Y5S2 1711 aa5.56□□□□□ -1.52
CPD-202ENST00000543464 CLIP1P30622 1438 aa5.55□□□□□ -1.52
CPD-202ENST00000543464 LOC105371045A0A1W2PR82 267 aa5.53□□□□□ -1.52
CPD-202ENST00000543464 PPRC1Q5VV67 1664 aaKnown RBP5.53□□□□□ -1.52
CPD-202ENST00000543464 GAPVD1Q14C86 1478 aa5.53□□□□□ -1.52
CPD-202ENST00000543464 PHF23Q9BUL5 403 aaPredicted RBP5.53□□□□□ -1.52
CPD-202ENST00000543464 KDM6BO15054 1643 aa5.53□□□□□ -1.52
CPD-202ENST00000543464 GRIN2AQ12879 1464 aa5.53□□□□□ -1.52
CPD-202ENST00000543464 MAGI1Q96QZ7 1491 aaPredicted RBP5.53□□□□□ -1.52
CPD-202ENST00000543464 PDS5BQ9NTI5 1447 aa5.52□□□□□ -1.53
CPD-202ENST00000543464 SIGLEC1Q9BZZ2 1709 aa5.52□□□□□ -1.53
CPD-202ENST00000543464 VPS8Q8N3P4 1428 aa5.52□□□□□ -1.53
CPD-202ENST00000543464 SUPT6HQ7KZ85 1726 aaKnown RBP5.51□□□□□ -1.53
CPD-202ENST00000543464 RAPGEF6Q8TEU7 1601 aa5.51□□□□□ -1.53
CPD-202ENST00000543464 KIF27Q86VH2 1401 aa5.51□□□□□ -1.53
CPD-202ENST00000543464 BCORL1Q5H9F3 1711 aa5.51□□□□□ -1.53
CPD-202ENST00000543464 KIF14Q15058 1648 aa5.51□□□□□ -1.53
CPD-202ENST00000543464 FYCO1Q9BQS8 1478 aa5.5□□□□□ -1.53
CPD-202ENST00000543464 RRBP1Q9P2E9 1410 aaKnown RBP5.5□□□□□ -1.53
CPD-202ENST00000543464 SYNJ2O15056 1496 aa5.48□□□□□ -1.53
CPD-202ENST00000543464 TCOF1Q13428 1488 aaKnown RBP5.48□□□□□ -1.53
CPD-202ENST00000543464 ADGBQ8N7X0 1667 aa5.48□□□□□ -1.53
CPD-202ENST00000543464 PREX2Q70Z35 1606 aa5.48□□□□□ -1.53
CPD-202ENST00000543464 NUP153P49790 1475 aaKnown RBP5.48□□□□□ -1.53
CPD-202ENST00000543464 FHAD1B1AJZ9 1412 aa5.48□□□□□ -1.53
CPD-202ENST00000543464 MAPKBP1O60336 1514 aa5.47□□□□□ -1.53
CPD-202ENST00000543464 ZCCHC11Q5TAX3 1644 aaKnown RBP5.47□□□□□ -1.53
CPD-202ENST00000543464 ABCA9Q8IUA7 1624 aa5.46□□□□□ -1.54
CPD-202ENST00000543464 ABCC2Q92887 1545 aa5.46□□□□□ -1.54
CPD-202ENST00000543464 ABCC10Q5T3U5 1492 aa5.46□□□□□ -1.54
CPD-202ENST00000543464 DEPDC5O75140 1603 aa5.46□□□□□ -1.54
CPD-202ENST00000543464 POLR1AO95602 1720 aaPredicted RBP5.46□□□□□ -1.54
CPD-202ENST00000543464 CASKIN1Q8WXD9 1431 aa5.45□□□□□ -1.54
CPD-202ENST00000543464 HECW1Q76N89 1606 aa5.45□□□□□ -1.54
CPD-202ENST00000543464 DNMT1P26358 1616 aaKnown RBP5.45□□□□□ -1.54
CPD-202ENST00000543464 LRRC9Q6ZRR7 1453 aa5.45□□□□□ -1.54
CPD-202ENST00000543464 KIAA0586Q9BVV6 1533 aa5.45□□□□□ -1.54
CPD-202ENST00000543464 KIF13AQ9H1H9 1805 aa5.44□□□□□ -1.54
CPD-202ENST00000543464 TTC37Q6PGP7 1564 aa5.44□□□□□ -1.54
CPD-202ENST00000543464 ITSN2Q9NZM3 1697 aa5.43□□□□□ -1.54
CPD-202ENST00000543464 MROH1Q8NDA8 1641 aa5.43□□□□□ -1.54
CPD-202ENST00000543464 IFT172Q9UG01 1749 aa5.43□□□□□ -1.54
CPD-202ENST00000543464 MAST1Q9Y2H9 1570 aa5.43□□□□□ -1.54
CPD-202ENST00000543464 PTPRKQ15262 1439 aa5.42□□□□□ -1.54
CPD-202ENST00000543464 CSRNP3Q8WYN3 585 aa5.42□□□□□ -1.54
CPD-202ENST00000543464 CARMIL1Q5VZK9 1371 aa5.42□□□□□ -1.54
CPD-202ENST00000543464 MAP3K4Q9Y6R4 1608 aa5.42□□□□□ -1.54
CPD-202ENST00000543464 FRMPD1Q5SYB0 1578 aa5.42□□□□□ -1.54
CPD-202ENST00000543464 SAMD9LQ8IVG5 1584 aa5.42□□□□□ -1.54
CPD-202ENST00000543464 PTPN23Q9H3S7 1636 aa5.41□□□□□ -1.54
CPD-202ENST00000543464 TRIM41Q8WV44 630 aa5.41□□□□□ -1.54
CPD-202ENST00000543464 EHBP1L1Q8N3D4 1523 aa5.41□□□□□ -1.54
CPD-202ENST00000543464 EPRSP07814 1512 aaKnown RBP5.4□□□□□ -1.54
CPD-202ENST00000543464 CDK13Q14004 1512 aaKnown RBP5.4□□□□□ -1.54
CPD-202ENST00000543464 UHRF1BP1LA0JNW5 1464 aa5.4□□□□□ -1.55
CPD-202ENST00000543464 MAGI2Q86UL8 1455 aa5.39□□□□□ -1.55
CPD-202ENST00000543464 TDRD9Q8NDG6 1382 aaKnown RBP5.39□□□□□ -1.55
CPD-202ENST00000543464 RICTORQ6R327 1708 aa5.39□□□□□ -1.55
CPD-202ENST00000543464 UNC13BO14795 1591 aa5.39□□□□□ -1.55
CPD-202ENST00000543464 VWDEQ8N2E2 1590 aa5.39□□□□□ -1.55
CPD-202ENST00000543464 INO80Q9ULG1 1556 aaPredicted RBP5.39□□□□□ -1.55
CPD-202ENST00000543464 MYO5CQ9NQX4 1742 aa5.39□□□□□ -1.55
CPD-202ENST00000543464 KDM5DQ9BY66 1539 aa5.39□□□□□ -1.55
CPD-202ENST00000543464 PLXNC1O60486 1568 aa5.39□□□□□ -1.55
CPD-202ENST00000543464 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.38□□□□□ -1.55
CPD-202ENST00000543464 ARHGEF5Q12774 1597 aa5.38□□□□□ -1.55
CPD-202ENST00000543464 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.37□□□□□ -1.55
CPD-202ENST00000543464 FHOD3Q2V2M9 1422 aa5.37□□□□□ -1.55
CPD-202ENST00000543464 PHLDB1Q86UU1 1377 aa5.37□□□□□ -1.55
CPD-202ENST00000543464 ARAP3Q8WWN8 1544 aa5.36□□□□□ -1.55
CPD-202ENST00000543464 ADGRL2O95490 1459 aa5.35□□□□□ -1.55
CPD-202ENST00000543464 E9PCH4 1651 aa5.35□□□□□ -1.55
CPD-202ENST00000543464 KIDINS220Q9ULH0 1771 aa5.34□□□□□ -1.55
CPD-202ENST00000543464 ARHGEF12Q9NZN5 1544 aa5.34□□□□□ -1.55
CPD-202ENST00000543464 PLB1Q6P1J6 1458 aa5.34□□□□□ -1.55
CPD-202ENST00000543464 KDM5CP41229 1560 aa5.34□□□□□ -1.55
CPD-202ENST00000543464 CCDC18Q5T9S5 1454 aa5.34□□□□□ -1.56
CPD-202ENST00000543464 MBD5Q9P267 1494 aa5.34□□□□□ -1.56
CPD-202ENST00000543464 SETD1AO15047 1707 aaKnown RBP5.34□□□□□ -1.56
CPD-202ENST00000543464 RIMBP3CA6NJZ7 1639 aa5.33□□□□□ -1.56
CPD-202ENST00000543464 RIMBP3BA6NNM3 1639 aa5.33□□□□□ -1.56
CPD-202ENST00000543464 RIMBP3Q9UFD9 1639 aa5.33□□□□□ -1.56
CPD-202ENST00000543464 RNF17Q9BXT8 1623 aaKnown RBP5.33□□□□□ -1.56
CPD-202ENST00000543464 AKNAQ7Z591 1439 aa5.33□□□□□ -1.56
CPD-202ENST00000543464 KANK4Q5T7N3 995 aaPredicted RBP5.32□□□□□ -1.56
CPD-202ENST00000543464 ZC3H13Q5T200 1668 aaKnown RBP5.32□□□□□ -1.56
CPD-202ENST00000543464 IQGAP3Q86VI3 1631 aa5.32□□□□□ -1.56
CPD-202ENST00000543464 ATP10BO94823 1461 aa5.32□□□□□ -1.56
CPD-202ENST00000543464 ABCC1P33527 1531 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms