RNA–Protein interactions for RNA: ENST00000543415.5

GTF2H3-213, Transcript of general transcription factor IIH subunit 3, humanhuman

TSL 5

Gene GTF2H3, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2H3-213ENST00000543415 CCDC61Q9Y6R9 512 aa10□□□□□ -0.81
GTF2H3-213ENST00000543415 MS4A3Q96HJ5 214 aa9.97□□□□□ -0.81
GTF2H3-213ENST00000543415 RASEFQ8IZ41 740 aa9.96□□□□□ -0.82
GTF2H3-213ENST00000543415 KIF12Q96FN5 646 aa9.94□□□□□ -0.82
GTF2H3-213ENST00000543415 ASTLQ6HA08 431 aaPredicted RBP9.91□□□□□ -0.82
GTF2H3-213ENST00000543415 NUBP1P53384 320 aa9.9□□□□□ -0.82
GTF2H3-213ENST00000543415 FAM212AQ96EL1 285 aa9.89□□□□□ -0.83
GTF2H3-213ENST00000543415 ATMINO43313 823 aaPredicted RBP9.88□□□□□ -0.83
GTF2H3-213ENST00000543415 MAP3K13O43283 966 aa9.87□□□□□ -0.83
GTF2H3-213ENST00000543415 PELP1Q8IZL8 1130 aaKnown RBP9.86□□□□□ -0.83
GTF2H3-213ENST00000543415 SLC39A7Q92504 469 aa9.86□□□□□ -0.83
GTF2H3-213ENST00000543415 SGIP1Q9BQI5 828 aa9.86□□□□□ -0.83
GTF2H3-213ENST00000543415 C7P10643 843 aa9.85□□□□□ -0.83
GTF2H3-213ENST00000543415 TIE1P35590 1138 aa9.83□□□□□ -0.84
GTF2H3-213ENST00000543415 VASPP50552 380 aaPredicted RBP9.83□□□□□ -0.84
GTF2H3-213ENST00000543415 METRNQ9UJH8 293 aa9.82□□□□□ -0.84
GTF2H3-213ENST00000543415 PCDHB13Q9Y5F0 798 aa9.81□□□□□ -0.84
GTF2H3-213ENST00000543415 ATN1P54259 1190 aaPredicted RBP9.8□□□□□ -0.84
GTF2H3-213ENST00000543415 BMP2KQ9NSY1 1161 aaPredicted RBP9.8□□□□□ -0.84
GTF2H3-213ENST00000543415 DCAF8Q5TAQ9 597 aa9.79□□□□□ -0.84
GTF2H3-213ENST00000543415 KLHL34Q8N239 644 aa9.79□□□□□ -0.84
GTF2H3-213ENST00000543415 POTEB2H3BUK9 544 aa9.77□□□□□ -0.85
GTF2H3-213ENST00000543415 TRPC6Q9Y210 931 aa9.77□□□□□ -0.85
GTF2H3-213ENST00000543415 TTLL13PA6NNM8 815 aa9.74□□□□□ -0.85
GTF2H3-213ENST00000543415 OTUD5Q96G74 571 aa9.74□□□□□ -0.85
GTF2H3-213ENST00000543415 GSE1Q14687 1217 aa9.73□□□□□ -0.85
GTF2H3-213ENST00000543415 IFNL1Q8IU54 200 aa9.73□□□□□ -0.85
GTF2H3-213ENST00000543415 MAMSTRQ6ZN01 415 aa9.72□□□□□ -0.85
GTF2H3-213ENST00000543415 PYGBP11216 843 aa9.69□□□□□ -0.86
GTF2H3-213ENST00000543415 IER5LQ5T953 404 aa9.69□□□□□ -0.86
GTF2H3-213ENST00000543415 TRIM35Q9UPQ4 493 aa9.68□□□□□ -0.86
GTF2H3-213ENST00000543415 SEC24BO95487 1268 aa9.67□□□□□ -0.86
GTF2H3-213ENST00000543415 TMEM106CQ9BVX2 250 aa9.67□□□□□ -0.86
GTF2H3-213ENST00000543415 SCUBE2Q9NQ36 999 aa9.65□□□□□ -0.86
GTF2H3-213ENST00000543415 POTEFA5A3E0 1075 aa9.64□□□□□ -0.87
GTF2H3-213ENST00000543415 POTEJP0CG39 1038 aa9.64□□□□□ -0.87
GTF2H3-213ENST00000543415 SPOCK2Q92563 424 aa9.64□□□□□ -0.87
GTF2H3-213ENST00000543415 CHRM1P11229 460 aaPredicted RBP9.63□□□□□ -0.87
GTF2H3-213ENST00000543415 ZNF467Q7Z7K2 595 aaPredicted RBP9.62□□□□□ -0.87
GTF2H3-213ENST00000543415 IFNLR1Q8IU57 520 aaPredicted RBP9.62□□□□□ -0.87
GTF2H3-213ENST00000543415 PCDHB8Q9UN66 801 aa9.61□□□□□ -0.87
GTF2H3-213ENST00000543415 COLQQ9Y215 455 aaPredicted RBP9.61□□□□□ -0.87
GTF2H3-213ENST00000543415 PLCG2P16885 1265 aa9.57□□□□□ -0.88
GTF2H3-213ENST00000543415 CIZ1Q9ULV3 898 aaPredicted RBP9.56□□□□□ -0.88
GTF2H3-213ENST00000543415 IRX5P78411 483 aaPredicted RBP9.53□□□□□ -0.88
GTF2H3-213ENST00000543415 OCEL1Q9H607 264 aa9.53□□□□□ -0.88
GTF2H3-213ENST00000543415 GOLGA2Q08379 1002 aa9.51□□□□□ -0.89
GTF2H3-213ENST00000543415 PSEN1P49768 467 aa9.5□□□□□ -0.89
GTF2H3-213ENST00000543415 TRIM41Q8WV44 630 aa9.5□□□□□ -0.89
GTF2H3-213ENST00000543415 PDAP1Q13442 181 aaKnown RBP9.49□□□□□ -0.89
GTF2H3-213ENST00000543415 MKRN3Q13064 507 aaKnown RBP9.48□□□□□ -0.89
GTF2H3-213ENST00000543415 POTEMA6NI47 508 aa9.46□□□□□ -0.9
GTF2H3-213ENST00000543415 POTEGQ6S5H5 508 aa9.44□□□□□ -0.9
GTF2H3-213ENST00000543415 SLAIN1Q8ND83 568 aa9.44□□□□□ -0.9
GTF2H3-213ENST00000543415 FAM163AQ96GL9 167 aaPredicted RBP9.44□□□□□ -0.9
GTF2H3-213ENST00000543415 PDCD7Q8N8D1 485 aaKnown RBP9.4□□□□□ -0.9
GTF2H3-213ENST00000543415 L3MBTL3Q96JM7 780 aaPredicted RBP9.4□□□□□ -0.9
GTF2H3-213ENST00000543415 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.4□□□□□ -0.94e-9■■■■■ 35
GTF2H3-213ENST00000543415 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.4□□□□□ -0.9
GTF2H3-213ENST00000543415 PCDH10Q9P2E7 1040 aa9.39□□□□□ -0.91
GTF2H3-213ENST00000543415 LCE2DQ5TA82 110 aaPredicted RBP9.38□□□□□ -0.91
GTF2H3-213ENST00000543415 CABP2Q9NPB3 220 aa9.37□□□□□ -0.91
GTF2H3-213ENST00000543415 ILDR1Q86SU0 546 aaPredicted RBP9.35□□□□□ -0.91
GTF2H3-213ENST00000543415 SNPHO15079 494 aa9.34□□□□□ -0.91
GTF2H3-213ENST00000543415 C3orf67Q6ZVT6 689 aa9.34□□□□□ -0.91
GTF2H3-213ENST00000543415 RIOK3O14730 519 aaKnown RBP9.32□□□□□ -0.92
GTF2H3-213ENST00000543415 PLSCR2Q9NRY7 297 aa9.32□□□□□ -0.92
GTF2H3-213ENST00000543415 G3V3G9 751 aa9.3□□□□□ -0.92
GTF2H3-213ENST00000543415 VGFO15240 615 aaPredicted RBP9.28□□□□□ -0.92
GTF2H3-213ENST00000543415 ST18O60284 1047 aa9.28□□□□□ -0.92
GTF2H3-213ENST00000543415 TAOK2Q9UL54 1235 aa9.28□□□□□ -0.92
GTF2H3-213ENST00000543415 DPY19L2Q6NUT2 758 aa9.26□□□□□ -0.93
GTF2H3-213ENST00000543415 EFCAB3Q8N7B9 438 aa9.26□□□□□ -0.93
GTF2H3-213ENST00000543415 RNF25Q96BH1 459 aaPredicted RBP9.26□□□□□ -0.93
GTF2H3-213ENST00000543415 TMEM121BQ9BXQ6 578 aaPredicted RBP9.26□□□□□ -0.93
GTF2H3-213ENST00000543415 BOLA1Q9Y3E2 137 aa9.26□□□□□ -0.93
GTF2H3-213ENST00000543415 SOX12O15370 315 aa9.24□□□□□ -0.93
GTF2H3-213ENST00000543415 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.23□□□□□ -0.93
GTF2H3-213ENST00000543415 PKD2Q13563 968 aa9.23□□□□□ -0.93
GTF2H3-213ENST00000543415 ZFP91Q96JP5 570 aaPredicted RBP9.23□□□□□ -0.93
GTF2H3-213ENST00000543415 AMER1Q5JTC6 1135 aaPredicted RBP9.19□□□□□ -0.94
GTF2H3-213ENST00000543415 CDAN1Q8IWY9 1227 aa9.19□□□□□ -0.94
GTF2H3-213ENST00000543415 ECM2O94769 699 aaPredicted RBP9.18□□□□□ -0.94
GTF2H3-213ENST00000543415 RTN4Q9NQC3 1192 aaKnown RBP9.17□□□□□ -0.94
GTF2H3-213ENST00000543415 BCL11BQ9C0K0 894 aaPredicted RBP9.15□□□□□ -0.94
GTF2H3-213ENST00000543415 NLRP6P59044 892 aa9.13□□□□□ -0.95
GTF2H3-213ENST00000543415 PHF8Q9UPP1 1060 aa9.13□□□□□ -0.95
GTF2H3-213ENST00000543415 MICALL2Q8IY33 904 aa9.12□□□□□ -0.95
GTF2H3-213ENST00000543415 MARVELD3Q96A59 401 aa9.12□□□□□ -0.95
GTF2H3-213ENST00000543415 STK24Q9Y6E0 443 aa9.12□□□□□ -0.95
GTF2H3-213ENST00000543415 STK25O00506 426 aa9.11□□□□□ -0.95
GTF2H3-213ENST00000543415 RGL2O15211 777 aa9.11□□□□□ -0.95
GTF2H3-213ENST00000543415 EMP3P54852 163 aa9.11□□□□□ -0.95
GTF2H3-213ENST00000543415 MS4A4AQ96JQ5 239 aa9.11□□□□□ -0.95
GTF2H3-213ENST00000543415 DOK7Q18PE1 504 aa9.09□□□□□ -0.95
GTF2H3-213ENST00000543415 HOXB3P14651 431 aaPredicted RBP9.08□□□□□ -0.96
GTF2H3-213ENST00000543415 ZNF710Q8N1W2 664 aa9.08□□□□□ -0.96
GTF2H3-213ENST00000543415 RIMBP2O15034 1052 aa9.06□□□□□ -0.96
GTF2H3-213ENST00000543415 FBXO22Q8NEZ5 403 aa9.06□□□□□ -0.96
GTF2H3-213ENST00000543415 MFRPQ9BY79 579 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms