RNA–Protein interactions for RNA: ENST00000541893.5

TMEM258-206, Transcript of transmembrane protein 258, humanhuman

TSL 5

Gene TMEM258, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-206ENST00000541893 OSCARQ8IYS5 282 aa9.69□□□□□ -0.86
TMEM258-206ENST00000541893 DAXXQ9UER7 740 aaPredicted RBP9.69□□□□□ -0.86
TMEM258-206ENST00000541893 VASPP50552 380 aaPredicted RBP9.68□□□□□ -0.86
TMEM258-206ENST00000541893 CFTRP13569 1480 aa9.67□□□□□ -0.86
TMEM258-206ENST00000541893 POLA2Q14181 598 aa9.67□□□□□ -0.86
TMEM258-206ENST00000541893 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.67□□□□□ -0.86
TMEM258-206ENST00000541893 KDM2AQ9Y2K7 1162 aa9.64□□□□□ -0.87
TMEM258-206ENST00000541893 ARXQ96QS3 562 aa9.63□□□□□ -0.87
TMEM258-206ENST00000541893 RSF1Q96T23 1441 aaPredicted RBP9.62□□□□□ -0.87
TMEM258-206ENST00000541893 TOP2AP11388 1531 aaKnown RBP9.61□□□□□ -0.87
TMEM258-206ENST00000541893 BBXQ8WY36 941 aaPredicted RBP9.61□□□□□ -0.87
TMEM258-206ENST00000541893 PKD2Q13563 968 aa9.6□□□□□ -0.87
TMEM258-206ENST00000541893 TIMELESSQ9UNS1 1208 aa9.6□□□□□ -0.87
TMEM258-206ENST00000541893 URB2Q14146 1524 aaKnown RBP9.6□□□□□ -0.87
TMEM258-206ENST00000541893 SPDYE4A6NLX3 237 aa9.59□□□□□ -0.87
TMEM258-206ENST00000541893 ERICH6Q7L0X2 663 aa9.59□□□□□ -0.87
TMEM258-206ENST00000541893 FBLN2P98095 1184 aa9.57□□□□□ -0.88
TMEM258-206ENST00000541893 IFNLR1Q8IU57 520 aaPredicted RBP9.57□□□□□ -0.88
TMEM258-206ENST00000541893 PRDM2Q13029 1718 aa9.56□□□□□ -0.88
TMEM258-206ENST00000541893 PROM2Q8N271 834 aa9.56□□□□□ -0.88
TMEM258-206ENST00000541893 TULP1O00294 542 aaPredicted RBP9.55□□□□□ -0.88
TMEM258-206ENST00000541893 IFT140Q96RY7 1462 aa9.54□□□□□ -0.88
TMEM258-206ENST00000541893 PAXIP1Q6ZW49 1069 aaPredicted RBP9.54□□□□□ -0.88
TMEM258-206ENST00000541893 ABCC8Q09428 1581 aa9.53□□□□□ -0.88
TMEM258-206ENST00000541893 ZBTB12Q9Y330 459 aaPredicted RBP9.52□□□□□ -0.89
TMEM258-206ENST00000541893 CFAP44Q96MT7 982 aa9.51□□□□□ -0.89
TMEM258-206ENST00000541893 CCDC88BA6NC98 1476 aa9.51□□□□□ -0.89
TMEM258-206ENST00000541893 RIMBP3CA6NJZ7 1639 aa9.5□□□□□ -0.89
TMEM258-206ENST00000541893 RIMBP3BA6NNM3 1639 aa9.5□□□□□ -0.89
TMEM258-206ENST00000541893 RIMBP3Q9UFD9 1639 aa9.5□□□□□ -0.89
TMEM258-206ENST00000541893 TOPBP1Q92547 1522 aa9.49□□□□□ -0.89
TMEM258-206ENST00000541893 ZNF608Q9ULD9 1512 aaPredicted RBP9.49□□□□□ -0.89
TMEM258-206ENST00000541893 GTF3C3Q9Y5Q9 886 aa9.48□□□□□ -0.89
TMEM258-206ENST00000541893 ARHGEF11O15085 1522 aa9.47□□□□□ -0.89
TMEM258-206ENST00000541893 NBR1Q14596 966 aa9.46□□□□□ -0.9
TMEM258-206ENST00000541893 DNMBPQ6XZF7 1577 aa9.46□□□□□ -0.9
TMEM258-206ENST00000541893 EIF4G3O43432 1585 aaKnown RBP9.45□□□□□ -0.9
TMEM258-206ENST00000541893 CYB5RLQ6IPT4 315 aa9.44□□□□□ -0.9
TMEM258-206ENST00000541893 MKRN4PQ13434 485 aaPredicted RBP9.43□□□□□ -0.9
TMEM258-206ENST00000541893 SPRYD3Q8NCJ5 442 aa9.43□□□□□ -0.9
TMEM258-206ENST00000541893 NPM1P06748 294 aaKnown RBP eCLIP9.42□□□□□ -0.9
TMEM258-206ENST00000541893 AQRO60306 1485 aaKnown RBP eCLIP9.41□□□□□ -0.91e-6■■■■□ 24.7
TMEM258-206ENST00000541893 ECM2O94769 699 aaPredicted RBP9.41□□□□□ -0.9
TMEM258-206ENST00000541893 TARBP1Q13395 1621 aaKnown RBP9.41□□□□□ -0.9
TMEM258-206ENST00000541893 CHD1O14646 1710 aa9.39□□□□□ -0.91
TMEM258-206ENST00000541893 HOMEZQ8IX15 550 aa9.39□□□□□ -0.91
TMEM258-206ENST00000541893 TSHZ2Q9NRE2 1034 aa9.39□□□□□ -0.91
TMEM258-206ENST00000541893 POLA1P09884 1462 aaPredicted RBP9.38□□□□□ -0.91
TMEM258-206ENST00000541893 SOGA1O94964 1423 aa9.37□□□□□ -0.91
TMEM258-206ENST00000541893 SPOCK2Q92563 424 aa9.36□□□□□ -0.91
TMEM258-206ENST00000541893 ARAP1Q96P48 1450 aa9.35□□□□□ -0.91
TMEM258-206ENST00000541893 WDR97A6NE52 1622 aa9.35□□□□□ -0.91
TMEM258-206ENST00000541893 CHMP7Q8WUX9 453 aaPredicted RBP9.34□□□□□ -0.91
TMEM258-206ENST00000541893 TDRD9Q8NDG6 1382 aaKnown RBP9.34□□□□□ -0.91
TMEM258-206ENST00000541893 RAD54L2Q9Y4B4 1467 aa9.33□□□□□ -0.92
TMEM258-206ENST00000541893 MAGI1Q96QZ7 1491 aaPredicted RBP9.32□□□□□ -0.92
TMEM258-206ENST00000541893 SNAPC4Q5SXM2 1469 aa9.31□□□□□ -0.92
TMEM258-206ENST00000541893 SYNJ1O43426 1573 aa9.31□□□□□ -0.92
TMEM258-206ENST00000541893 GRIN2BQ13224 1484 aa9.3□□□□□ -0.92
TMEM258-206ENST00000541893 FGD5Q6ZNL6 1462 aa9.3□□□□□ -0.92
TMEM258-206ENST00000541893 TMEM132AQ24JP5 1023 aa9.3□□□□□ -0.92
TMEM258-206ENST00000541893 KLHL34Q8N239 644 aa9.3□□□□□ -0.92
TMEM258-206ENST00000541893 RBM42Q9BTD8 480 aaKnown RBP9.29□□□□□ -0.92
TMEM258-206ENST00000541893 CLASP1Q7Z460 1538 aa9.29□□□□□ -0.92
TMEM258-206ENST00000541893 SYNJ2O15056 1496 aa9.28□□□□□ -0.92
TMEM258-206ENST00000541893 RGL2O15211 777 aa9.27□□□□□ -0.93
TMEM258-206ENST00000541893 CUX1P39880 1505 aa9.26□□□□□ -0.93
TMEM258-206ENST00000541893 SPDYE2BA6NHP3 402 aa9.25□□□□□ -0.93
TMEM258-206ENST00000541893 SPDYE6P0CI01 402 aa9.25□□□□□ -0.93
TMEM258-206ENST00000541893 SPDYE2Q495Y8 402 aa9.25□□□□□ -0.93
TMEM258-206ENST00000541893 GAPVD1Q14C86 1478 aa9.24□□□□□ -0.93
TMEM258-206ENST00000541893 C14orf37Q86TY3 774 aa9.24□□□□□ -0.93
TMEM258-206ENST00000541893 ZNF692Q9BU19 519 aaPredicted RBP9.22□□□□□ -0.93
TMEM258-206ENST00000541893 PBRM1Q86U86 1689 aa9.22□□□□□ -0.93
TMEM258-206ENST00000541893 ABCA10Q8WWZ4 1543 aa9.21□□□□□ -0.94
TMEM258-206ENST00000541893 CHGAP10645 457 aaKnown RBP9.2□□□□□ -0.94
TMEM258-206ENST00000541893 WRNQ14191 1432 aaPredicted RBP eCLIP9.18□□□□□ -0.949e-6■■■■■ 50.1
TMEM258-206ENST00000541893 ABCA5Q8WWZ7 1642 aa9.18□□□□□ -0.94
TMEM258-206ENST00000541893 SSUH2Q9Y2M2 353 aa9.17□□□□□ -0.94
TMEM258-206ENST00000541893 GRIN2AQ12879 1464 aa9.16□□□□□ -0.94
TMEM258-206ENST00000541893 AKT1S1Q96B36 256 aa9.16□□□□□ -0.94
TMEM258-206ENST00000541893 STAG3Q9UJ98 1225 aa9.13□□□□□ -0.95
TMEM258-206ENST00000541893 FHAD1B1AJZ9 1412 aa9.13□□□□□ -0.95
TMEM258-206ENST00000541893 NUP160Q12769 1436 aa9.13□□□□□ -0.95
TMEM258-206ENST00000541893 CEP170Q5SW79 1584 aa9.12□□□□□ -0.95
TMEM258-206ENST00000541893 ADAMTS12P58397 1594 aa9.12□□□□□ -0.95
TMEM258-206ENST00000541893 SUPT5HO00267 1087 aaKnown RBP9.11□□□□□ -0.95
TMEM258-206ENST00000541893 HS6ST3Q8IZP7 471 aa9.11□□□□□ -0.95
TMEM258-206ENST00000541893 ERICH3Q5RHP9 1530 aa9.1□□□□□ -0.95
TMEM258-206ENST00000541893 TOP2BQ02880 1626 aa9.1□□□□□ -0.95
TMEM258-206ENST00000541893 SHROOM2Q13796 1616 aa9.1□□□□□ -0.95
TMEM258-206ENST00000541893 BIVM-ERCC5R4GMW8 1640 aa9.1□□□□□ -0.95
TMEM258-206ENST00000541893 ERCC6L2Q5T890 1561 aa9.1□□□□□ -0.95
TMEM258-206ENST00000541893 PLCD3Q8N3E9 789 aa9.09□□□□□ -0.95
TMEM258-206ENST00000541893 PRG4Q92954 1404 aaPredicted RBP9.07□□□□□ -0.96
TMEM258-206ENST00000541893 REM2Q8IYK8 340 aaPredicted RBP9.07□□□□□ -0.96
TMEM258-206ENST00000541893 JPH4Q96JJ6 628 aa9.07□□□□□ -0.96
TMEM258-206ENST00000541893 RANGAP1P46060 587 aaPredicted RBP9.05□□□□□ -0.96
TMEM258-206ENST00000541893 CIZ1Q9ULV3 898 aaPredicted RBP9.04□□□□□ -0.96
TMEM258-206ENST00000541893 KIF13AQ9H1H9 1805 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms