RNA–Protein interactions for RNA: ENST00000541304.5

CDKN3-206, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 2 BASIC

Gene CDKN3, Length 1,070 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-206ENST00000541304 CLCN6P51797 869 aa10.73□□□□□ -0.69
CDKN3-206ENST00000541304 PLEKHG5O94827 1062 aa10.72□□□□□ -0.69
CDKN3-206ENST00000541304 SCRIBQ14160 1630 aa10.72□□□□□ -0.69
CDKN3-206ENST00000541304 MIER1Q8N108 512 aa10.66□□□□□ -0.7
CDKN3-206ENST00000541304 UNC13AQ9UPW8 1703 aa10.64□□□□□ -0.71
CDKN3-206ENST00000541304 POTEMA6NI47 508 aa10.64□□□□□ -0.71
CDKN3-206ENST00000541304 PLCD3Q8N3E9 789 aa10.63□□□□□ -0.71
CDKN3-206ENST00000541304 PHF12Q96QT6 1004 aa10.6□□□□□ -0.71
CDKN3-206ENST00000541304 POTEIP0CG38 1075 aa10.59□□□□□ -0.71
CDKN3-206ENST00000541304 FBXO3Q9UK99 471 aa10.59□□□□□ -0.71
CDKN3-206ENST00000541304 BICRAQ9NZM4 1560 aa10.59□□□□□ -0.71
CDKN3-206ENST00000541304 ZBTB47Q9UFB7 747 aaPredicted RBP10.58□□□□□ -0.72
CDKN3-206ENST00000541304 GALR2O43603 387 aaPredicted RBP10.56□□□□□ -0.72
CDKN3-206ENST00000541304 POTEGQ6S5H5 508 aa10.56□□□□□ -0.72
CDKN3-206ENST00000541304 DCBLD2Q96PD2 775 aa10.56□□□□□ -0.72
CDKN3-206ENST00000541304 TSPYL2Q9H2G4 693 aaPredicted RBP10.55□□□□□ -0.72
CDKN3-206ENST00000541304 CCDC61Q9Y6R9 512 aa10.51□□□□□ -0.73
CDKN3-206ENST00000541304 RASEFQ8IZ41 740 aa10.5□□□□□ -0.73
CDKN3-206ENST00000541304 PCDH10Q9P2E7 1040 aa10.49□□□□□ -0.73
CDKN3-206ENST00000541304 MS4A3Q96HJ5 214 aa10.48□□□□□ -0.73
CDKN3-206ENST00000541304 VASPP50552 380 aaPredicted RBP10.44□□□□□ -0.74
CDKN3-206ENST00000541304 NUBP1P53384 320 aa10.44□□□□□ -0.74
CDKN3-206ENST00000541304 FAM212AQ96EL1 285 aa10.43□□□□□ -0.74
CDKN3-206ENST00000541304 KIF12Q96FN5 646 aa10.42□□□□□ -0.74
CDKN3-206ENST00000541304 BAZ1AQ9NRL2 1556 aaPredicted RBP10.41□□□□□ -0.74
CDKN3-206ENST00000541304 OTUD5Q96G74 571 aa10.41□□□□□ -0.74
CDKN3-206ENST00000541304 MAP3K13O43283 966 aa10.37□□□□□ -0.75
CDKN3-206ENST00000541304 ASTLQ6HA08 431 aaPredicted RBP10.37□□□□□ -0.75
CDKN3-206ENST00000541304 KLHL34Q8N239 644 aa10.34□□□□□ -0.75
CDKN3-206ENST00000541304 SMARCA4P51532 1647 aa10.33□□□□□ -0.76
CDKN3-206ENST00000541304 ATMINO43313 823 aaPredicted RBP10.33□□□□□ -0.76
CDKN3-206ENST00000541304 EIF4G1Q04637 1599 aaKnown RBP10.33□□□□□ -0.76
CDKN3-206ENST00000541304 SGIP1Q9BQI5 828 aa10.32□□□□□ -0.76
CDKN3-206ENST00000541304 PCDHB13Q9Y5F0 798 aa10.31□□□□□ -0.76
CDKN3-206ENST00000541304 CECR2Q9BXF3 1484 aa10.3□□□□□ -0.76
CDKN3-206ENST00000541304 TIE1P35590 1138 aa10.3□□□□□ -0.76
CDKN3-206ENST00000541304 PELP1Q8IZL8 1130 aaKnown RBP10.3□□□□□ -0.76
CDKN3-206ENST00000541304 DCAF8Q5TAQ9 597 aa10.29□□□□□ -0.76
CDKN3-206ENST00000541304 SLC39A7Q92504 469 aa10.29□□□□□ -0.76
CDKN3-206ENST00000541304 BMP2KQ9NSY1 1161 aaPredicted RBP10.29□□□□□ -0.76
CDKN3-206ENST00000541304 PEG3Q9GZU2 1588 aa10.29□□□□□ -0.76
CDKN3-206ENST00000541304 METRNQ9UJH8 293 aa10.28□□□□□ -0.76
CDKN3-206ENST00000541304 TRPC6Q9Y210 931 aa10.28□□□□□ -0.76
CDKN3-206ENST00000541304 SMARCA2P51531 1590 aa10.27□□□□□ -0.76
CDKN3-206ENST00000541304 ATN1P54259 1190 aaPredicted RBP10.27□□□□□ -0.77
CDKN3-206ENST00000541304 MROH2BQ7Z745 1585 aa10.26□□□□□ -0.77
CDKN3-206ENST00000541304 RSF1Q96T23 1441 aaPredicted RBP10.25□□□□□ -0.77
CDKN3-206ENST00000541304 C7P10643 843 aa10.25□□□□□ -0.77
CDKN3-206ENST00000541304 GSE1Q14687 1217 aa10.25□□□□□ -0.77
CDKN3-206ENST00000541304 IFNL1Q8IU54 200 aa10.24□□□□□ -0.77
CDKN3-206ENST00000541304 PYGBP11216 843 aa10.23□□□□□ -0.77
CDKN3-206ENST00000541304 TTLL13PA6NNM8 815 aa10.22□□□□□ -0.77
CDKN3-206ENST00000541304 POTEB2H3BUK9 544 aa10.22□□□□□ -0.77
CDKN3-206ENST00000541304 IFNLR1Q8IU57 520 aaPredicted RBP10.22□□□□□ -0.77
CDKN3-206ENST00000541304 HMGXB3Q12766 1538 aa10.22□□□□□ -0.77
CDKN3-206ENST00000541304 NCAPD3P42695 1498 aa10.2□□□□□ -0.78
CDKN3-206ENST00000541304 SPOCK2Q92563 424 aa10.2□□□□□ -0.78
CDKN3-206ENST00000541304 ATAD2BQ9ULI0 1458 aa10.2□□□□□ -0.78
CDKN3-206ENST00000541304 CC2D2AQ9P2K1 1620 aa10.19□□□□□ -0.78
CDKN3-206ENST00000541304 TRIM35Q9UPQ4 493 aa10.17□□□□□ -0.78
CDKN3-206ENST00000541304 TMEM106CQ9BVX2 250 aa10.16□□□□□ -0.78
CDKN3-206ENST00000541304 TOP2AP11388 1531 aaKnown RBP10.16□□□□□ -0.78
CDKN3-206ENST00000541304 BAZ1BQ9UIG0 1483 aaKnown RBP10.16□□□□□ -0.78
CDKN3-206ENST00000541304 IER5LQ5T953 404 aa10.14□□□□□ -0.79
CDKN3-206ENST00000541304 WIZO95785 1651 aa10.14□□□□□ -0.79
CDKN3-206ENST00000541304 ZNF467Q7Z7K2 595 aaPredicted RBP10.13□□□□□ -0.79
CDKN3-206ENST00000541304 PCDHB8Q9UN66 801 aa10.12□□□□□ -0.79
CDKN3-206ENST00000541304 CHRM1P11229 460 aaPredicted RBP10.11□□□□□ -0.79
CDKN3-206ENST00000541304 CIZ1Q9ULV3 898 aaPredicted RBP10.11□□□□□ -0.79
CDKN3-206ENST00000541304 POTEFA5A3E0 1075 aa10.1□□□□□ -0.79
CDKN3-206ENST00000541304 SEC24BO95487 1268 aa10.1□□□□□ -0.79
CDKN3-206ENST00000541304 MAMSTRQ6ZN01 415 aa10.1□□□□□ -0.79
CDKN3-206ENST00000541304 LCE2DQ5TA82 110 aaPredicted RBP10.09□□□□□ -0.79
CDKN3-206ENST00000541304 SUPT5HO00267 1087 aaKnown RBP10.08□□□□□ -0.8
CDKN3-206ENST00000541304 SCUBE2Q9NQ36 999 aa10.07□□□□□ -0.8
CDKN3-206ENST00000541304 POTEJP0CG39 1038 aa10.06□□□□□ -0.8
CDKN3-206ENST00000541304 COLQQ9Y215 455 aaPredicted RBP10.06□□□□□ -0.8
CDKN3-206ENST00000541304 PLCG2P16885 1265 aa10.03□□□□□ -0.8
CDKN3-206ENST00000541304 TRIM41Q8WV44 630 aa10.03□□□□□ -0.8
CDKN3-206ENST00000541304 FAM163AQ96GL9 167 aaPredicted RBP10.02□□□□□ -0.81
CDKN3-206ENST00000541304 IRX5P78411 483 aaPredicted RBP10.01□□□□□ -0.81
CDKN3-206ENST00000541304 PSEN1P49768 467 aa10□□□□□ -0.81
CDKN3-206ENST00000541304 GOLGA2Q08379 1002 aa10□□□□□ -0.81
CDKN3-206ENST00000541304 PDAP1Q13442 181 aaKnown RBP9.99□□□□□ -0.81
CDKN3-206ENST00000541304 OCEL1Q9H607 264 aa9.96□□□□□ -0.82
CDKN3-206ENST00000541304 CCDC88BA6NC98 1476 aa9.96□□□□□ -0.82
CDKN3-206ENST00000541304 MKRN3Q13064 507 aaKnown RBP9.95□□□□□ -0.82
CDKN3-206ENST00000541304 CDAN1Q8IWY9 1227 aa9.93□□□□□ -0.82
CDKN3-206ENST00000541304 LAMC3Q9Y6N6 1575 aa9.92□□□□□ -0.82
CDKN3-206ENST00000541304 CFTRP13569 1480 aa9.9□□□□□ -0.83
CDKN3-206ENST00000541304 CADPSQ9ULU8 1353 aa9.89□□□□□ -0.83
CDKN3-206ENST00000541304 PDCD7Q8N8D1 485 aaKnown RBP9.89□□□□□ -0.83
CDKN3-206ENST00000541304 CABP2Q9NPB3 220 aa9.89□□□□□ -0.83
CDKN3-206ENST00000541304 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.87□□□□□ -0.83
CDKN3-206ENST00000541304 RIOK3O14730 519 aaKnown RBP9.86□□□□□ -0.83
CDKN3-206ENST00000541304 PRDM2Q13029 1718 aa9.85□□□□□ -0.83
CDKN3-206ENST00000541304 SLAIN1Q8ND83 568 aa9.85□□□□□ -0.83
CDKN3-206ENST00000541304 RNF25Q96BH1 459 aaPredicted RBP9.85□□□□□ -0.83
CDKN3-206ENST00000541304 PDS5BQ9NTI5 1447 aa9.83□□□□□ -0.84
CDKN3-206ENST00000541304 VGFO15240 615 aaPredicted RBP9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 114.9 ms