RNA–Protein interactions for RNA: ENST00000539552.1

AC055720.1-201, humanhuman

TSL 5 BASIC

Gene AC055720.1, Length 475 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055720.1-201ENST00000539552 PLEKHG5O94827 1062 aa9.78□□□□□ -0.84
AC055720.1-201ENST00000539552 MS4A3Q96HJ5 214 aa9.78□□□□□ -0.84
AC055720.1-201ENST00000539552 SCUBE2Q9NQ36 999 aa9.78□□□□□ -0.84
AC055720.1-201ENST00000539552 ASTLQ6HA08 431 aaPredicted RBP9.77□□□□□ -0.85
AC055720.1-201ENST00000539552 PELP1Q8IZL8 1130 aaKnown RBP9.76□□□□□ -0.85
AC055720.1-201ENST00000539552 TSPYL2Q9H2G4 693 aaPredicted RBP9.76□□□□□ -0.85
AC055720.1-201ENST00000539552 ATMINO43313 823 aaPredicted RBP9.74□□□□□ -0.85
AC055720.1-201ENST00000539552 MNX1P50219 401 aaPredicted RBP9.73□□□□□ -0.85
AC055720.1-201ENST00000539552 EHMT2Q96KQ7 1210 aa9.72□□□□□ -0.85
AC055720.1-201ENST00000539552 FAM163AQ96GL9 167 aaPredicted RBP9.69□□□□□ -0.86
AC055720.1-201ENST00000539552 ATN1P54259 1190 aaPredicted RBP9.65□□□□□ -0.86
AC055720.1-201ENST00000539552 SEC24BO95487 1268 aa9.63□□□□□ -0.87
AC055720.1-201ENST00000539552 CCDC61Q9Y6R9 512 aa9.62□□□□□ -0.87
AC055720.1-201ENST00000539552 MIER1Q8N108 512 aa9.6□□□□□ -0.87
AC055720.1-201ENST00000539552 KIF12Q96FN5 646 aa9.6□□□□□ -0.87
AC055720.1-201ENST00000539552 POTEJP0CG39 1038 aa9.58□□□□□ -0.88
AC055720.1-201ENST00000539552 TIE1P35590 1138 aa9.58□□□□□ -0.88
AC055720.1-201ENST00000539552 BMP2KQ9NSY1 1161 aaPredicted RBP9.57□□□□□ -0.88
AC055720.1-201ENST00000539552 MAP3K13O43283 966 aa9.55□□□□□ -0.88
AC055720.1-201ENST00000539552 PLCD3Q8N3E9 789 aa9.52□□□□□ -0.89
AC055720.1-201ENST00000539552 ZBTB47Q9UFB7 747 aaPredicted RBP9.51□□□□□ -0.89
AC055720.1-201ENST00000539552 PROM2Q8N271 834 aa9.49□□□□□ -0.89
AC055720.1-201ENST00000539552 TTLL13PA6NNM8 815 aa9.48□□□□□ -0.89
AC055720.1-201ENST00000539552 IER5LQ5T953 404 aa9.48□□□□□ -0.89
AC055720.1-201ENST00000539552 TRPC6Q9Y210 931 aa9.48□□□□□ -0.89
AC055720.1-201ENST00000539552 PCDHB13Q9Y5F0 798 aa9.48□□□□□ -0.89
AC055720.1-201ENST00000539552 LCE2DQ5TA82 110 aaPredicted RBP9.47□□□□□ -0.89
AC055720.1-201ENST00000539552 RASEFQ8IZ41 740 aa9.47□□□□□ -0.89
AC055720.1-201ENST00000539552 SGIP1Q9BQI5 828 aa9.47□□□□□ -0.89
AC055720.1-201ENST00000539552 TRIM35Q9UPQ4 493 aa9.47□□□□□ -0.89
AC055720.1-201ENST00000539552 CDAN1Q8IWY9 1227 aa9.46□□□□□ -0.9
AC055720.1-201ENST00000539552 POTEFA5A3E0 1075 aa9.45□□□□□ -0.9
AC055720.1-201ENST00000539552 SLAIN1Q8ND83 568 aa9.44□□□□□ -0.9
AC055720.1-201ENST00000539552 PLCG2P16885 1265 aa9.43□□□□□ -0.9
AC055720.1-201ENST00000539552 COLQQ9Y215 455 aaPredicted RBP9.43□□□□□ -0.9
AC055720.1-201ENST00000539552 FAM212AQ96EL1 285 aa9.41□□□□□ -0.9
AC055720.1-201ENST00000539552 TMEM106CQ9BVX2 250 aa9.38□□□□□ -0.91
AC055720.1-201ENST00000539552 SNPHO15079 494 aa9.35□□□□□ -0.91
AC055720.1-201ENST00000539552 ST18O60284 1047 aa9.34□□□□□ -0.91
AC055720.1-201ENST00000539552 IFNL1Q8IU54 200 aa9.33□□□□□ -0.92
AC055720.1-201ENST00000539552 TMEM121BQ9BXQ6 578 aaPredicted RBP9.3□□□□□ -0.92
AC055720.1-201ENST00000539552 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.3□□□□□ -0.92
AC055720.1-201ENST00000539552 NUBP1P53384 320 aa9.29□□□□□ -0.92
AC055720.1-201ENST00000539552 OCEL1Q9H607 264 aa9.28□□□□□ -0.92
AC055720.1-201ENST00000539552 DCAF8Q5TAQ9 597 aa9.27□□□□□ -0.93
AC055720.1-201ENST00000539552 GOLGA2Q08379 1002 aa9.25□□□□□ -0.93
AC055720.1-201ENST00000539552 IRX5P78411 483 aaPredicted RBP9.24□□□□□ -0.93
AC055720.1-201ENST00000539552 C3orf67Q6ZVT6 689 aa9.22□□□□□ -0.93
AC055720.1-201ENST00000539552 PYGBP11216 843 aa9.21□□□□□ -0.94
AC055720.1-201ENST00000539552 MMRN1Q13201 1228 aa9.21□□□□□ -0.94
AC055720.1-201ENST00000539552 SPNS2Q8IVW8 549 aa9.19□□□□□ -0.94
AC055720.1-201ENST00000539552 MKRN3Q13064 507 aaKnown RBP9.18□□□□□ -0.94
AC055720.1-201ENST00000539552 MARVELD3Q96A59 401 aa9.18□□□□□ -0.94
AC055720.1-201ENST00000539552 L3MBTL3Q96JM7 780 aaPredicted RBP9.17□□□□□ -0.94
AC055720.1-201ENST00000539552 EMP3P54852 163 aa9.16□□□□□ -0.94
AC055720.1-201ENST00000539552 ZNF467Q7Z7K2 595 aaPredicted RBP9.14□□□□□ -0.95
AC055720.1-201ENST00000539552 PCDHB8Q9UN66 801 aa9.14□□□□□ -0.95
AC055720.1-201ENST00000539552 G3V3G9 751 aa9.13□□□□□ -0.95
AC055720.1-201ENST00000539552 FBXO3Q9UK99 471 aa9.13□□□□□ -0.95
AC055720.1-201ENST00000539552 FKBP8Q14318 412 aa9.12□□□□□ -0.95
AC055720.1-201ENST00000539552 GSE1Q14687 1217 aa9.11□□□□□ -0.95
AC055720.1-201ENST00000539552 KLHL34Q8N239 644 aa9.11□□□□□ -0.95
AC055720.1-201ENST00000539552 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.08□□□□□ -0.96
AC055720.1-201ENST00000539552 FAM205CA6NFA0 338 aa9.07□□□□□ -0.96
AC055720.1-201ENST00000539552 HS3ST6Q96QI5 342 aa9.04□□□□□ -0.96
AC055720.1-201ENST00000539552 PDCD7Q8N8D1 485 aaKnown RBP9.03□□□□□ -0.96
AC055720.1-201ENST00000539552 PSEN1P49768 467 aa9.01□□□□□ -0.97
AC055720.1-201ENST00000539552 ZNF710Q8N1W2 664 aa9.01□□□□□ -0.97
AC055720.1-201ENST00000539552 RIMBP2O15034 1052 aa8.95□□□□□ -0.98
AC055720.1-201ENST00000539552 CHRM1P11229 460 aaPredicted RBP8.95□□□□□ -0.98
AC055720.1-201ENST00000539552 PDAP1Q13442 181 aaKnown RBP8.95□□□□□ -0.98
AC055720.1-201ENST00000539552 DOK7Q18PE1 504 aa8.94□□□□□ -0.98
AC055720.1-201ENST00000539552 KRTAP3-3Q9BYR6 98 aa8.94□□□□□ -0.98
AC055720.1-201ENST00000539552 KRTAP3-2Q9BYR7 98 aa8.94□□□□□ -0.98
AC055720.1-201ENST00000539552 BOLA1Q9Y3E2 137 aa8.94□□□□□ -0.98
AC055720.1-201ENST00000539552 ERBB3P21860 1342 aa8.94□□□□□ -0.98
AC055720.1-201ENST00000539552 VASPP50552 380 aaPredicted RBP8.92□□□□□ -0.98
AC055720.1-201ENST00000539552 CABP2Q9NPB3 220 aa8.91□□□□□ -0.98
AC055720.1-201ENST00000539552 CIZ1Q9ULV3 898 aaPredicted RBP8.9□□□□□ -0.98
AC055720.1-201ENST00000539552 POTEB3A0JP26 581 aa8.88□□□□□ -0.99
AC055720.1-201ENST00000539552 POTEBQ6S5H4 581 aa8.88□□□□□ -0.99
AC055720.1-201ENST00000539552 RNF166Q96A37 237 aaPredicted RBP8.88□□□□□ -0.99
AC055720.1-201ENST00000539552 HOXB1P14653 301 aaPredicted RBP8.87□□□□□ -0.99
AC055720.1-201ENST00000539552 DPY19L2Q6NUT2 758 aa8.87□□□□□ -0.99
AC055720.1-201ENST00000539552 HOXB3P14651 431 aaPredicted RBP8.82□□□□□ -1
AC055720.1-201ENST00000539552 VARS2Q5ST30 1063 aaKnown RBP8.82□□□□□ -1
AC055720.1-201ENST00000539552 ILDR1Q86SU0 546 aaPredicted RBP8.82□□□□□ -1
AC055720.1-201ENST00000539552 SPOCK2Q92563 424 aa8.82□□□□□ -1
AC055720.1-201ENST00000539552 MYT1LQ9UL68 1186 aa8.82□□□□□ -1
AC055720.1-201ENST00000539552 PTGER2P43116 358 aa8.79□□□□□ -1
AC055720.1-201ENST00000539552 ZSWIM6Q9HCJ5 1215 aa8.78□□□□□ -1
AC055720.1-201ENST00000539552 ZNF687Q8N1G0 1237 aa8.74□□□□□ -1.01
AC055720.1-201ENST00000539552 TRIM41Q8WV44 630 aa8.74□□□□□ -1.01
AC055720.1-201ENST00000539552 EFCAB3Q8N7B9 438 aa8.73□□□□□ -1.01
AC055720.1-201ENST00000539552 ANKRD13DQ6ZTN6 518 aa8.7□□□□□ -1.02
AC055720.1-201ENST00000539552 MICALL2Q8IY33 904 aa8.69□□□□□ -1.02
AC055720.1-201ENST00000539552 SOX12O15370 315 aa8.67□□□□□ -1.02
AC055720.1-201ENST00000539552 IFNLR1Q8IU57 520 aaPredicted RBP8.65□□□□□ -1.02
AC055720.1-201ENST00000539552 GPR153Q6NV75 609 aa8.64□□□□□ -1.03
AC055720.1-201ENST00000539552 ARSIQ5FYB1 569 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms