RNA–Protein interactions for RNA: ENST00000538966.5

PLXNB3-209, Transcript of plexin B3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PLXNB3, Length 6,377 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNB3-209ENST00000538966 ZBTB7CA1YPR0 619 aa18.78■□□□□ 0.6
PLXNB3-209ENST00000538966 NACADO15069 1562 aa18.77■□□□□ 0.6
PLXNB3-209ENST00000538966 CDK11BP21127 795 aaKnown RBP18.75■□□□□ 0.59
PLXNB3-209ENST00000538966 TPRNQ4KMQ1 711 aa18.74■□□□□ 0.59
PLXNB3-209ENST00000538966 NPM1P06748 294 aaKnown RBP eCLIP18.73■□□□□ 0.59
PLXNB3-209ENST00000538966 RRP7BPQ9NSQ0 103 aa18.73■□□□□ 0.59
PLXNB3-209ENST00000538966 TRIM44Q96DX7 344 aaPredicted RBP18.72■□□□□ 0.59
PLXNB3-209ENST00000538966 NCLP19338 710 aaKnown RBP18.72■□□□□ 0.59
PLXNB3-209ENST00000538966 DDRGK1Q96HY6 314 aa18.72■□□□□ 0.59
PLXNB3-209ENST00000538966 EIF4G2P78344 907 aaKnown RBP eCLIP18.71■□□□□ 0.59
PLXNB3-209ENST00000538966 BECN1Q14457 450 aa18.71■□□□□ 0.59
PLXNB3-209ENST00000538966 TSPY4P0CV99 314 aa18.7■□□□□ 0.58
PLXNB3-209ENST00000538966 TSPY10P0CW01 314 aa18.7■□□□□ 0.58
PLXNB3-209ENST00000538966 MTUS2Q5JR59 1369 aa18.68■□□□□ 0.58
PLXNB3-209ENST00000538966 C14orf37Q86TY3 774 aa18.66■□□□□ 0.58
PLXNB3-209ENST00000538966 SUPT16HQ9Y5B9 1047 aaKnown RBP18.65■□□□□ 0.58
PLXNB3-209ENST00000538966 RTN4Q9NQC3 1192 aaKnown RBP18.63■□□□□ 0.57
PLXNB3-209ENST00000538966 RGL3Q3MIN7 710 aa18.61■□□□□ 0.57
PLXNB3-209ENST00000538966 LAS1LQ9Y4W2 734 aaKnown RBP18.61■□□□□ 0.57
PLXNB3-209ENST00000538966 ANP32EQ9BTT0 268 aa18.61■□□□□ 0.57
PLXNB3-209ENST00000538966 GOLGA6L22H0YM25 854 aa18.6■□□□□ 0.57
PLXNB3-209ENST00000538966 PTMAP06454 111 aaKnown RBP18.6■□□□□ 0.57
PLXNB3-209ENST00000538966 RSF1Q96T23 1441 aaPredicted RBP18.59■□□□□ 0.57
PLXNB3-209ENST00000538966 BAZ1BQ9UIG0 1483 aaKnown RBP18.56■□□□□ 0.56
PLXNB3-209ENST00000538966 CLIP1P30622 1438 aa18.56■□□□□ 0.56
PLXNB3-209ENST00000538966 PPM1GO15355 546 aaPredicted RBP18.55■□□□□ 0.56
PLXNB3-209ENST00000538966 DNTTIP2Q5QJE6 756 aaKnown RBP18.55■□□□□ 0.56
PLXNB3-209ENST00000538966 NEUROD2Q15784 382 aa18.55■□□□□ 0.56
PLXNB3-209ENST00000538966 PPP1R15AO75807 674 aaPredicted RBP18.52■□□□□ 0.56
PLXNB3-209ENST00000538966 KCNH8Q96L42 1107 aa18.52■□□□□ 0.56
PLXNB3-209ENST00000538966 FTSJ3Q8IY81 847 aaKnown RBP18.52■□□□□ 0.55
PLXNB3-209ENST00000538966 EEA1Q15075 1411 aa18.51■□□□□ 0.55
PLXNB3-209ENST00000538966 CHMP7Q8WUX9 453 aaPredicted RBP18.51■□□□□ 0.55
PLXNB3-209ENST00000538966 TAOK2Q9UL54 1235 aa18.51■□□□□ 0.55
PLXNB3-209ENST00000538966 RGS3P49796 1198 aa18.51■□□□□ 0.55
PLXNB3-209ENST00000538966 NAP1L5Q96NT1 182 aaPredicted RBP18.51■□□□□ 0.55
PLXNB3-209ENST00000538966 TULP1O00294 542 aaPredicted RBP18.5■□□□□ 0.55
PLXNB3-209ENST00000538966 GOLGA3Q08378 1498 aa18.49■□□□□ 0.55
PLXNB3-209ENST00000538966 ZRSR1Q15695 479 aaKnown RBP18.48■□□□□ 0.55
PLXNB3-209ENST00000538966 KNSTRNQ9Y448 316 aa18.48■□□□□ 0.55
PLXNB3-209ENST00000538966 MYO15BQ96JP2 1530 aa18.48■□□□□ 0.55
PLXNB3-209ENST00000538966 CASC1Q6TDU7 716 aa18.48■□□□□ 0.55
PLXNB3-209ENST00000538966 CFAP53Q96M91 514 aa18.47■□□□□ 0.55
PLXNB3-209ENST00000538966 PLCB2Q00722 1185 aa18.46■□□□□ 0.55
PLXNB3-209ENST00000538966 FRAT1Q92837 279 aaPredicted RBP18.45■□□□□ 0.54
PLXNB3-209ENST00000538966 TNNT2P45379 298 aaPredicted RBP18.44■□□□□ 0.54
PLXNB3-209ENST00000538966 HAP1P54257 671 aaPredicted RBP18.44■□□□□ 0.54
PLXNB3-209ENST00000538966 CARD11Q9BXL7 1154 aa18.44■□□□□ 0.54
PLXNB3-209ENST00000538966 WRNQ14191 1432 aaPredicted RBP eCLIP18.44■□□□□ 0.54
PLXNB3-209ENST00000538966 NOP58Q9Y2X3 529 aaKnown RBP18.43■□□□□ 0.54
PLXNB3-209ENST00000538966 BAZ1AQ9NRL2 1556 aaPredicted RBP18.42■□□□□ 0.54
PLXNB3-209ENST00000538966 PPP4R2Q9NY27 417 aa18.41■□□□□ 0.54
PLXNB3-209ENST00000538966 B4GALNT3Q6L9W6 998 aa18.41■□□□□ 0.54
PLXNB3-209ENST00000538966 SIN3AQ96ST3 1273 aa18.41■□□□□ 0.54
PLXNB3-209ENST00000538966 CC2D1BQ5T0F9 858 aaKnown RBP18.4■□□□□ 0.54
PLXNB3-209ENST00000538966 ERICH6BQ5W0A0 696 aa18.4■□□□□ 0.54
PLXNB3-209ENST00000538966 CEP162Q5TB80 1403 aa18.4■□□□□ 0.54
PLXNB3-209ENST00000538966 HSP90AB1P08238 724 aaKnown RBP18.37■□□□□ 0.53
PLXNB3-209ENST00000538966 MAPK8IP3Q9UPT6 1336 aa18.37■□□□□ 0.53
PLXNB3-209ENST00000538966 KIF27Q86VH2 1401 aa18.35■□□□□ 0.53
PLXNB3-209ENST00000538966 PLEKHD1A6NEE1 506 aa18.34■□□□□ 0.53
PLXNB3-209ENST00000538966 SPRYD3Q8NCJ5 442 aa18.33■□□□□ 0.53
PLXNB3-209ENST00000538966 CDCA8Q53HL2 280 aa18.33■□□□□ 0.53
PLXNB3-209ENST00000538966 ARID4BQ4LE39 1312 aaPredicted RBP18.33■□□□□ 0.52
PLXNB3-209ENST00000538966 CEP164Q9UPV0 1460 aa18.3■□□□□ 0.52
PLXNB3-209ENST00000538966 CFDP1Q9UEE9 299 aaPredicted RBP18.3■□□□□ 0.52
PLXNB3-209ENST00000538966 NAP1L2Q9ULW6 460 aaPredicted RBP18.3■□□□□ 0.52
PLXNB3-209ENST00000538966 U2SURPO15042 1029 aaKnown RBP18.29■□□□□ 0.52
PLXNB3-209ENST00000538966 OS9Q13438 667 aaPredicted RBP18.29■□□□□ 0.52
PLXNB3-209ENST00000538966 AMER1Q5JTC6 1135 aaPredicted RBP18.28■□□□□ 0.52
PLXNB3-209ENST00000538966 LMOD2Q6P5Q4 547 aa18.28■□□□□ 0.52
PLXNB3-209ENST00000538966 NUDCQ9Y266 331 aa18.27■□□□□ 0.52
PLXNB3-209ENST00000538966 FGD1P98174 961 aa18.26■□□□□ 0.51
PLXNB3-209ENST00000538966 POGKQ9P215 609 aa18.25■□□□□ 0.51
PLXNB3-209ENST00000538966 NPHP1O15259 732 aa18.25■□□□□ 0.51
PLXNB3-209ENST00000538966 ERCC6Q03468 1493 aa18.24■□□□□ 0.51
PLXNB3-209ENST00000538966 KCNJ4P48050 445 aa18.24■□□□□ 0.51
PLXNB3-209ENST00000538966 TNIKQ9UKE5 1360 aa18.23■□□□□ 0.51
PLXNB3-209ENST00000538966 DEKP35659 375 aaKnown RBP18.23■□□□□ 0.51
PLXNB3-209ENST00000538966 HSCBQ8IWL3 235 aa18.21■□□□□ 0.51
PLXNB3-209ENST00000538966 GOLGA6L6A8MZA4 724 aa18.21■□□□□ 0.51
PLXNB3-209ENST00000538966 CECR2Q9BXF3 1484 aa18.19■□□□□ 0.5
PLXNB3-209ENST00000538966 NCBP3Q53F19 620 aaKnown RBP18.18■□□□□ 0.5
PLXNB3-209ENST00000538966 SOX12O15370 315 aa18.17■□□□□ 0.5
PLXNB3-209ENST00000538966 GOLGA6L4A6NEF3 574 aa18.16■□□□□ 0.5
PLXNB3-209ENST00000538966 TRHP20396 242 aaPredicted RBP18.16■□□□□ 0.5
PLXNB3-209ENST00000538966 RBM19Q9Y4C8 960 aaKnown RBP18.15■□□□□ 0.5
PLXNB3-209ENST00000538966 DCAF11Q8TEB1 546 aa18.15■□□□□ 0.5
PLXNB3-209ENST00000538966 MSNP26038 577 aaKnown RBP18.15■□□□□ 0.5
PLXNB3-209ENST00000538966 MS4A1P11836 297 aa18.13■□□□□ 0.49
PLXNB3-209ENST00000538966 DRC7Q8IY82 874 aa18.13■□□□□ 0.49
PLXNB3-209ENST00000538966 CHMP4BQ9H444 224 aaKnown RBP18.13■□□□□ 0.49
PLXNB3-209ENST00000538966 APBB1O00213 710 aa18.12■□□□□ 0.49
PLXNB3-209ENST00000538966 TMF1P82094 1093 aa18.11■□□□□ 0.49
PLXNB3-209ENST00000538966 CHAF1AQ13111 956 aaPredicted RBP18.11■□□□□ 0.49
PLXNB3-209ENST00000538966 SAFB2Q14151 953 aaKnown RBP eCLIP18.1■□□□□ 0.49
PLXNB3-209ENST00000538966 L1TD1Q5T7N2 865 aaKnown RBP18.1■□□□□ 0.49
PLXNB3-209ENST00000538966 ARID3AQ99856 593 aa18.1■□□□□ 0.49
PLXNB3-209ENST00000538966 GOLGA2Q08379 1002 aa18.09■□□□□ 0.49
PLXNB3-209ENST00000538966 NRDCO43847 1150 aa18.08■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms