RNA–Protein interactions for RNA: ENST00000538941.6

SCAPER-203, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 1 (best) BASIC

Gene SCAPER, Length 4,853 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-203ENST00000538941 EIF5BO60841 1220 aaKnown RBP9.32□□□□□ -0.92
SCAPER-203ENST00000538941 SIN3AQ96ST3 1273 aa9.31□□□□□ -0.92
SCAPER-203ENST00000538941 CCDC136Q96JN2 1154 aa9.31□□□□□ -0.92
SCAPER-203ENST00000538941 KANK4Q5T7N3 995 aaPredicted RBP9.31□□□□□ -0.92
SCAPER-203ENST00000538941 SETD5Q9C0A6 1442 aa9.3□□□□□ -0.92
SCAPER-203ENST00000538941 MRS2Q9HD23 443 aa9.3□□□□□ -0.92
SCAPER-203ENST00000538941 RAB3GAP2Q9H2M9 1393 aa9.3□□□□□ -0.92
SCAPER-203ENST00000538941 NPM2Q86SE8 214 aaKnown RBP9.3□□□□□ -0.92
SCAPER-203ENST00000538941 KIF27Q86VH2 1401 aa9.29□□□□□ -0.92
SCAPER-203ENST00000538941 ERICH6BQ5W0A0 696 aa9.29□□□□□ -0.92
SCAPER-203ENST00000538941 NOP58Q9Y2X3 529 aaKnown RBP9.29□□□□□ -0.92
SCAPER-203ENST00000538941 SMARCA2P51531 1590 aa9.29□□□□□ -0.92
SCAPER-203ENST00000538941 KCNH8Q96L42 1107 aa9.29□□□□□ -0.92
SCAPER-203ENST00000538941 RAPGEF2Q9Y4G8 1499 aa9.29□□□□□ -0.92
SCAPER-203ENST00000538941 DEKP35659 375 aaKnown RBP9.28□□□□□ -0.92
SCAPER-203ENST00000538941 SMARCA4P51532 1647 aa9.28□□□□□ -0.92
SCAPER-203ENST00000538941 KIF21BO75037 1637 aa9.27□□□□□ -0.93
SCAPER-203ENST00000538941 EIF4G2P78344 907 aaKnown RBP eCLIP9.27□□□□□ -0.93
SCAPER-203ENST00000538941 FANCIQ9NVI1 1328 aa9.25□□□□□ -0.93
SCAPER-203ENST00000538941 ZNF326Q5BKZ1 582 aaKnown RBP9.23□□□□□ -0.93
SCAPER-203ENST00000538941 MTUS2Q5JR59 1369 aa9.22□□□□□ -0.93
SCAPER-203ENST00000538941 B4GALNT3Q6L9W6 998 aa9.22□□□□□ -0.93
SCAPER-203ENST00000538941 FHAD1B1AJZ9 1412 aa9.21□□□□□ -0.93
SCAPER-203ENST00000538941 PPP1R15AO75807 674 aaPredicted RBP9.21□□□□□ -0.94
SCAPER-203ENST00000538941 TMC1Q8TDI8 760 aa9.18□□□□□ -0.94
SCAPER-203ENST00000538941 RRBP1Q9P2E9 1410 aaKnown RBP9.18□□□□□ -0.94
SCAPER-203ENST00000538941 ARHGAP35Q9NRY4 1499 aa9.17□□□□□ -0.94
SCAPER-203ENST00000538941 BICRAQ9NZM4 1560 aa9.17□□□□□ -0.94
SCAPER-203ENST00000538941 DDRGK1Q96HY6 314 aa9.17□□□□□ -0.94
SCAPER-203ENST00000538941 PPM1GO15355 546 aaPredicted RBP9.16□□□□□ -0.94
SCAPER-203ENST00000538941 CHIC2Q9UKJ5 165 aa9.16□□□□□ -0.94
SCAPER-203ENST00000538941 EIF4G1Q04637 1599 aaKnown RBP9.16□□□□□ -0.94
SCAPER-203ENST00000538941 HSPA5P11021 654 aaKnown RBP9.14□□□□□ -0.95
SCAPER-203ENST00000538941 RRP7BPQ9NSQ0 103 aa9.14□□□□□ -0.95
SCAPER-203ENST00000538941 NEFMP07197 916 aa9.13□□□□□ -0.95
SCAPER-203ENST00000538941 SYNJ1O43426 1573 aa9.13□□□□□ -0.95
SCAPER-203ENST00000538941 ERICH3Q5RHP9 1530 aa9.12□□□□□ -0.95
SCAPER-203ENST00000538941 IPO9Q96P70 1041 aaKnown RBP9.12□□□□□ -0.95
SCAPER-203ENST00000538941 CARMIL1Q5VZK9 1371 aa9.11□□□□□ -0.95
SCAPER-203ENST00000538941 UNC13AQ9UPW8 1703 aa9.11□□□□□ -0.95
SCAPER-203ENST00000538941 RTN4Q9NQC3 1192 aaKnown RBP9.11□□□□□ -0.95
SCAPER-203ENST00000538941 ATAD2BQ9ULI0 1458 aa9.11□□□□□ -0.95
SCAPER-203ENST00000538941 LAS1LQ9Y4W2 734 aaKnown RBP9.11□□□□□ -0.95
SCAPER-203ENST00000538941 CUX2O14529 1486 aa9.11□□□□□ -0.95
SCAPER-203ENST00000538941 NCAPD3P42695 1498 aa9.11□□□□□ -0.95
SCAPER-203ENST00000538941 ARAP1Q96P48 1450 aa9.11□□□□□ -0.95
SCAPER-203ENST00000538941 SALL2Q9Y467 1007 aaPredicted RBP9.09□□□□□ -0.95
SCAPER-203ENST00000538941 ZBED9Q6R2W3 1325 aa9.07□□□□□ -0.96
SCAPER-203ENST00000538941 ARID3CA6NKF2 412 aa9.07□□□□□ -0.96
SCAPER-203ENST00000538941 SLC4A1APQ9BWU0 796 aaKnown RBP9.07□□□□□ -0.96
SCAPER-203ENST00000538941 HMGXB3Q12766 1538 aa9.07□□□□□ -0.96
SCAPER-203ENST00000538941 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.06□□□□□ -0.96
SCAPER-203ENST00000538941 NUDCQ9Y266 331 aa9.06□□□□□ -0.96
SCAPER-203ENST00000538941 FMN1Q68DA7 1419 aa9.06□□□□□ -0.96
SCAPER-203ENST00000538941 MSH5O43196 834 aa9.06□□□□□ -0.96
SCAPER-203ENST00000538941 WDR97A6NE52 1622 aa9.06□□□□□ -0.96
SCAPER-203ENST00000538941 CANXP27824 592 aaKnown RBP9.06□□□□□ -0.96
SCAPER-203ENST00000538941 PDS5BQ9NTI5 1447 aa9.05□□□□□ -0.96
SCAPER-203ENST00000538941 CC2D2AQ9P2K1 1620 aa9.05□□□□□ -0.96
SCAPER-203ENST00000538941 TCERG1O14776 1098 aaKnown RBP9.05□□□□□ -0.96
SCAPER-203ENST00000538941 CCDC18Q5T9S5 1454 aa9.05□□□□□ -0.96
SCAPER-203ENST00000538941 ERCC6Q03468 1493 aa9.04□□□□□ -0.96
SCAPER-203ENST00000538941 LRRC9Q6ZRR7 1453 aa9.04□□□□□ -0.96
SCAPER-203ENST00000538941 PRXQ9BXM0 1461 aa9.04□□□□□ -0.96
SCAPER-203ENST00000538941 USP35Q9P2H5 1018 aa9.03□□□□□ -0.96
SCAPER-203ENST00000538941 UPF2Q9HAU5 1272 aaKnown RBP9.03□□□□□ -0.96
SCAPER-203ENST00000538941 PHLDB1Q86UU1 1377 aa9.03□□□□□ -0.96
SCAPER-203ENST00000538941 PRKRIP1Q9H875 184 aaPredicted RBP9.03□□□□□ -0.96
SCAPER-203ENST00000538941 SENP3-EIF4A1A0A087X0R7 540 aa9.02□□□□□ -0.96
SCAPER-203ENST00000538941 ZNF777Q9ULD5 760 aaPredicted RBP9.02□□□□□ -0.96
SCAPER-203ENST00000538941 TOP2BQ02880 1626 aa9.02□□□□□ -0.97
SCAPER-203ENST00000538941 CNTLNQ9NXG0 1405 aa9.01□□□□□ -0.97
SCAPER-203ENST00000538941 UACAQ9BZF9 1416 aa9□□□□□ -0.97
SCAPER-203ENST00000538941 FHOD3Q2V2M9 1422 aa9□□□□□ -0.97
SCAPER-203ENST00000538941 BECN1Q14457 450 aa8.99□□□□□ -0.97
SCAPER-203ENST00000538941 TIAM1Q13009 1591 aa8.99□□□□□ -0.97
SCAPER-203ENST00000538941 WDR43Q15061 677 aaKnown RBP eCLIP8.99□□□□□ -0.97
SCAPER-203ENST00000538941 MPHOSPH9Q99550 1183 aa8.99□□□□□ -0.97
SCAPER-203ENST00000538941 L3MBTL2Q969R5 705 aa8.98□□□□□ -0.97
SCAPER-203ENST00000538941 CARD11Q9BXL7 1154 aa8.98□□□□□ -0.97
SCAPER-203ENST00000538941 KDM2AQ9Y2K7 1162 aa8.98□□□□□ -0.97
SCAPER-203ENST00000538941 RCAN3Q9UKA8 241 aa8.97□□□□□ -0.97
SCAPER-203ENST00000538941 CADPSQ9ULU8 1353 aa8.97□□□□□ -0.97
SCAPER-203ENST00000538941 PEG3Q9GZU2 1588 aa8.97□□□□□ -0.97
SCAPER-203ENST00000538941 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.97□□□□□ -0.97
SCAPER-203ENST00000538941 WASHC2AQ641Q2 1341 aa8.97□□□□□ -0.97
SCAPER-203ENST00000538941 FGD6Q6ZV73 1430 aa8.96□□□□□ -0.97
SCAPER-203ENST00000538941 MAPKBP1O60336 1514 aa8.96□□□□□ -0.97
SCAPER-203ENST00000538941 CCDC7Q96M83 1385 aa8.96□□□□□ -0.98
SCAPER-203ENST00000538941 PODXL2Q9NZ53 605 aa8.95□□□□□ -0.98
SCAPER-203ENST00000538941 PDE4AP27815 886 aa8.94□□□□□ -0.98
SCAPER-203ENST00000538941 FOXD1Q16676 465 aa8.94□□□□□ -0.98
SCAPER-203ENST00000538941 PAK3O75914 559 aaPredicted RBP8.94□□□□□ -0.98
SCAPER-203ENST00000538941 RALBP1Q15311 655 aa8.94□□□□□ -0.98
SCAPER-203ENST00000538941 ROCK2O75116 1388 aaKnown RBP8.94□□□□□ -0.98
SCAPER-203ENST00000538941 MAP3K1Q13233 1512 aa8.94□□□□□ -0.98
SCAPER-203ENST00000538941 IGF1RP08069 1367 aa8.94□□□□□ -0.98
SCAPER-203ENST00000538941 CUX1P39880 1505 aa8.94□□□□□ -0.98
SCAPER-203ENST00000538941 ARXQ96QS3 562 aa8.94□□□□□ -0.98
SCAPER-203ENST00000538941 ANP32BQ92688 251 aaKnown RBP8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms