RNA–Protein interactions for RNA: ENST00000538348.6

C15orf40-209, Transcript of chromosome 15 open reading frame 40, humanhuman

TSL 2 BASIC

Gene C15orf40, Length 561 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C15orf40-209ENST00000538348 URB2Q14146 1524 aaKnown RBP17.6■□□□□ 0.41
C15orf40-209ENST00000538348 C19orf67A6NJJ6 358 aa17.54■□□□□ 0.4
C15orf40-209ENST00000538348 KCNA4P22459 653 aa17.54■□□□□ 0.4
C15orf40-209ENST00000538348 PRKAR2AP13861 404 aaKnown RBP17.53■□□□□ 0.4
C15orf40-209ENST00000538348 CCDC88BA6NC98 1476 aa17.45■□□□□ 0.38
C15orf40-209ENST00000538348 ZNF608Q9ULD9 1512 aaPredicted RBP17.41■□□□□ 0.38
C15orf40-209ENST00000538348 PRDM2Q13029 1718 aa17.38■□□□□ 0.37
C15orf40-209ENST00000538348 IFT140Q96RY7 1462 aa17.37■□□□□ 0.37
C15orf40-209ENST00000538348 TOPBP1Q92547 1522 aa17.36■□□□□ 0.37
C15orf40-209ENST00000538348 ATF5Q9Y2D1 282 aaPredicted RBP17.35■□□□□ 0.37
C15orf40-209ENST00000538348 RIMBP3CA6NJZ7 1639 aa17.3■□□□□ 0.36
C15orf40-209ENST00000538348 RIMBP3BA6NNM3 1639 aa17.3■□□□□ 0.36
C15orf40-209ENST00000538348 RIMBP3Q9UFD9 1639 aa17.3■□□□□ 0.36
C15orf40-209ENST00000538348 ABCC8Q09428 1581 aa17.28■□□□□ 0.36
C15orf40-209ENST00000538348 CLEC11AQ9Y240 323 aa17.28■□□□□ 0.36
C15orf40-209ENST00000538348 DNMBPQ6XZF7 1577 aa17.26■□□□□ 0.35
C15orf40-209ENST00000538348 ARHGEF11O15085 1522 aa17.26■□□□□ 0.35
C15orf40-209ENST00000538348 EIF4G3O43432 1585 aaKnown RBP17.25■□□□□ 0.35
C15orf40-209ENST00000538348 TARBP1Q13395 1621 aaKnown RBP17.24■□□□□ 0.35
C15orf40-209ENST00000538348 AQRO60306 1485 aaKnown RBP eCLIP17.21■□□□□ 0.356e-6■■■■□ 25.1
C15orf40-209ENST00000538348 POTEIP0CG38 1075 aa17.2■□□□□ 0.34
C15orf40-209ENST00000538348 SPDYE1Q8NFV5 336 aaPredicted RBP17.2■□□□□ 0.34
C15orf40-209ENST00000538348 POLA1P09884 1462 aaPredicted RBP17.18■□□□□ 0.34
C15orf40-209ENST00000538348 SPDYE2BA6NHP3 402 aa17.15■□□□□ 0.34
C15orf40-209ENST00000538348 SPDYE6P0CI01 402 aa17.15■□□□□ 0.34
C15orf40-209ENST00000538348 SPDYE2Q495Y8 402 aa17.15■□□□□ 0.34
C15orf40-209ENST00000538348 RAD54L2Q9Y4B4 1467 aa17.12■□□□□ 0.33
C15orf40-209ENST00000538348 CYB5RLQ6IPT4 315 aa17.11■□□□□ 0.33
C15orf40-209ENST00000538348 CHD1O14646 1710 aa17.1■□□□□ 0.33
C15orf40-209ENST00000538348 ARAP1Q96P48 1450 aa17.09■□□□□ 0.33
C15orf40-209ENST00000538348 SOGA1O94964 1423 aa17.08■□□□□ 0.32
C15orf40-209ENST00000538348 TDRD9Q8NDG6 1382 aaKnown RBP17.08■□□□□ 0.32
C15orf40-209ENST00000538348 CHADLQ6NUI6 762 aa17.05■□□□□ 0.32
C15orf40-209ENST00000538348 FBLN2P98095 1184 aa17.04■□□□□ 0.32
C15orf40-209ENST00000538348 FGD5Q6ZNL6 1462 aa17.03■□□□□ 0.32
C15orf40-209ENST00000538348 POTEMA6NI47 508 aa17.02■□□□□ 0.32
C15orf40-209ENST00000538348 CUX1P39880 1505 aa17.01■□□□□ 0.31
C15orf40-209ENST00000538348 WDR97A6NE52 1622 aa17■□□□□ 0.31
C15orf40-209ENST00000538348 CLASP1Q7Z460 1538 aa17■□□□□ 0.31
C15orf40-209ENST00000538348 SNAPC4Q5SXM2 1469 aa16.99■□□□□ 0.31
C15orf40-209ENST00000538348 MAGI1Q96QZ7 1491 aaPredicted RBP16.95■□□□□ 0.3
C15orf40-209ENST00000538348 GRIN2BQ13224 1484 aa16.94■□□□□ 0.3
C15orf40-209ENST00000538348 DCBLD2Q96PD2 775 aa16.93■□□□□ 0.3
C15orf40-209ENST00000538348 POTEGQ6S5H5 508 aa16.92■□□□□ 0.3
C15orf40-209ENST00000538348 CHMP7Q8WUX9 453 aaPredicted RBP16.92■□□□□ 0.3
C15orf40-209ENST00000538348 CD44P16070 742 aaKnown RBP16.91■□□□□ 0.3
C15orf40-209ENST00000538348 SYNJ2O15056 1496 aa16.91■□□□□ 0.3
C15orf40-209ENST00000538348 SYNJ1O43426 1573 aa16.89■□□□□ 0.3
C15orf40-209ENST00000538348 CLCN6P51797 869 aa16.88■□□□□ 0.29
C15orf40-209ENST00000538348 GAPVD1Q14C86 1478 aa16.86■□□□□ 0.29
C15orf40-209ENST00000538348 ABCA10Q8WWZ4 1543 aa16.85■□□□□ 0.29
C15orf40-209ENST00000538348 OTUD5Q96G74 571 aa16.84■□□□□ 0.29
C15orf40-209ENST00000538348 ABCA5Q8WWZ7 1642 aa16.83■□□□□ 0.28
C15orf40-209ENST00000538348 FOXD4L1Q9NU39 408 aa16.81■□□□□ 0.28
C15orf40-209ENST00000538348 PBRM1Q86U86 1689 aa16.81■□□□□ 0.28
C15orf40-209ENST00000538348 PRR29P0C7W0 189 aa16.77■□□□□ 0.28
C15orf40-209ENST00000538348 PCDH10Q9P2E7 1040 aa16.77■□□□□ 0.28
C15orf40-209ENST00000538348 ZNF692Q9BU19 519 aaPredicted RBP16.76■□□□□ 0.27
C15orf40-209ENST00000538348 SSUH2Q9Y2M2 353 aa16.75■□□□□ 0.27
C15orf40-209ENST00000538348 GRIN2AQ12879 1464 aa16.73■□□□□ 0.27
C15orf40-209ENST00000538348 ERCC6L2Q5T890 1561 aa16.72■□□□□ 0.27
C15orf40-209ENST00000538348 NUP160Q12769 1436 aa16.72■□□□□ 0.27
C15orf40-209ENST00000538348 WRNQ14191 1432 aaPredicted RBP eCLIP16.72■□□□□ 0.27
C15orf40-209ENST00000538348 ADAMTS12P58397 1594 aa16.69■□□□□ 0.26
C15orf40-209ENST00000538348 SUPT5HO00267 1087 aaKnown RBP16.69■□□□□ 0.26
C15orf40-209ENST00000538348 CEP170Q5SW79 1584 aa16.68■□□□□ 0.26
C15orf40-209ENST00000538348 TOP2BQ02880 1626 aa16.68■□□□□ 0.26
C15orf40-209ENST00000538348 BIVM-ERCC5R4GMW8 1640 aa16.67■□□□□ 0.26
C15orf40-209ENST00000538348 FHAD1B1AJZ9 1412 aa16.65■□□□□ 0.26
C15orf40-209ENST00000538348 FARP1Q9Y4F1 1045 aaPredicted RBP16.65■□□□□ 0.26
C15orf40-209ENST00000538348 SHROOM2Q13796 1616 aa16.65■□□□□ 0.26
C15orf40-209ENST00000538348 ERICH3Q5RHP9 1530 aa16.62■□□□□ 0.25
C15orf40-209ENST00000538348 POTEB2H3BUK9 544 aa16.6■□□□□ 0.25
C15orf40-209ENST00000538348 ZNF579Q8NAF0 562 aaKnown RBP16.55■□□□□ 0.24
C15orf40-209ENST00000538348 PRG4Q92954 1404 aaPredicted RBP16.53■□□□□ 0.24
C15orf40-209ENST00000538348 JPH4Q96JJ6 628 aa16.51■□□□□ 0.23
C15orf40-209ENST00000538348 MKRN4PQ13434 485 aaPredicted RBP16.48■□□□□ 0.23
C15orf40-209ENST00000538348 ZRANB1Q9UGI0 708 aa16.47■□□□□ 0.23
C15orf40-209ENST00000538348 RUSC2Q8N2Y8 1516 aa16.46■□□□□ 0.23
C15orf40-209ENST00000538348 KIF13AQ9H1H9 1805 aa16.45■□□□□ 0.22
C15orf40-209ENST00000538348 GALR2O43603 387 aaPredicted RBP16.45■□□□□ 0.22
C15orf40-209ENST00000538348 IGF1RP08069 1367 aa16.42■□□□□ 0.22
C15orf40-209ENST00000538348 ABCC10Q5T3U5 1492 aa16.4■□□□□ 0.22
C15orf40-209ENST00000538348 MAPKBP1O60336 1514 aa16.4■□□□□ 0.22
C15orf40-209ENST00000538348 KIAA0586Q9BVV6 1533 aa16.39■□□□□ 0.21
C15orf40-209ENST00000538348 ATXN8OSP0DMR3 200 aa16.38■□□□□ 0.21
C15orf40-209ENST00000538348 ADCY10Q96PN6 1610 aa16.37■□□□□ 0.21
C15orf40-209ENST00000538348 FAM69CQ0P6D2 419 aa16.35■□□□□ 0.21
C15orf40-209ENST00000538348 DIP2BQ9P265 1576 aa16.34■□□□□ 0.21
C15orf40-209ENST00000538348 SLC4A1APQ9BWU0 796 aaKnown RBP16.33■□□□□ 0.2
C15orf40-209ENST00000538348 KIF27Q86VH2 1401 aa16.33■□□□□ 0.2
C15orf40-209ENST00000538348 NPM1P06748 294 aaKnown RBP eCLIP16.31■□□□□ 0.2
C15orf40-209ENST00000538348 CUL7Q14999 1698 aa16.3■□□□□ 0.2
C15orf40-209ENST00000538348 LCE2DQ5TA82 110 aaPredicted RBP16.27■□□□□ 0.2
C15orf40-209ENST00000538348 FAM163AQ96GL9 167 aaPredicted RBP16.26■□□□□ 0.19
C15orf40-209ENST00000538348 CARMIL1Q5VZK9 1371 aa16.25■□□□□ 0.19
C15orf40-209ENST00000538348 PTPRGP23470 1445 aa16.24■□□□□ 0.19
C15orf40-209ENST00000538348 MAMSTRQ6ZN01 415 aa16.21■□□□□ 0.19
C15orf40-209ENST00000538348 PELP1Q8IZL8 1130 aaKnown RBP16.21■□□□□ 0.19
C15orf40-209ENST00000538348 KDM4FA0A1W2PPD8 638 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms