RNA–Protein interactions for RNA: ENST00000537486.5

LDHC-205, Transcript of lactate dehydrogenase C, humanhuman

TSL 5 BASIC

Gene LDHC, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHC-205ENST00000537486 ABCC8Q09428 1581 aa9.92□□□□□ -0.82
LDHC-205ENST00000537486 ERCC6L2Q5T890 1561 aa9.91□□□□□ -0.82
LDHC-205ENST00000537486 POLA1P09884 1462 aaPredicted RBP9.91□□□□□ -0.82
LDHC-205ENST00000537486 HECW2Q9P2P5 1572 aa9.89□□□□□ -0.83
LDHC-205ENST00000537486 DCAF8L1A6NGE4 600 aa9.89□□□□□ -0.83
LDHC-205ENST00000537486 MAGI1Q96QZ7 1491 aaPredicted RBP9.89□□□□□ -0.83
LDHC-205ENST00000537486 RAD54L2Q9Y4B4 1467 aa9.88□□□□□ -0.83
LDHC-205ENST00000537486 HOXD11P31277 338 aaPredicted RBP9.88□□□□□ -0.83
LDHC-205ENST00000537486 AMER1Q5JTC6 1135 aaPredicted RBP9.88□□□□□ -0.83
LDHC-205ENST00000537486 TDRD9Q8NDG6 1382 aaKnown RBP9.88□□□□□ -0.83
LDHC-205ENST00000537486 KDM6BO15054 1643 aa9.87□□□□□ -0.83
LDHC-205ENST00000537486 CHMP7Q8WUX9 453 aaPredicted RBP9.87□□□□□ -0.83
LDHC-205ENST00000537486 RNF39Q9H2S5 420 aa9.87□□□□□ -0.83
LDHC-205ENST00000537486 SYNJ2O15056 1496 aa9.86□□□□□ -0.83
LDHC-205ENST00000537486 WDR97A6NE52 1622 aa9.86□□□□□ -0.83
LDHC-205ENST00000537486 EIF5BO60841 1220 aaKnown RBP9.85□□□□□ -0.83
LDHC-205ENST00000537486 CENPBP07199 599 aaPredicted RBP9.84□□□□□ -0.83
LDHC-205ENST00000537486 PPP4R3CPQ6ZMV5 832 aa9.83□□□□□ -0.84
LDHC-205ENST00000537486 PBRM1Q86U86 1689 aa9.82□□□□□ -0.84
LDHC-205ENST00000537486 GRIN2BQ13224 1484 aa9.81□□□□□ -0.84
LDHC-205ENST00000537486 SOGA1O94964 1423 aa9.81□□□□□ -0.84
LDHC-205ENST00000537486 DIP2BQ9P265 1576 aa9.8□□□□□ -0.84
LDHC-205ENST00000537486 ADGRL1O94910 1474 aa9.8□□□□□ -0.84
LDHC-205ENST00000537486 FBXO41Q8TF61 875 aa9.8□□□□□ -0.84
LDHC-205ENST00000537486 CEP170Q5SW79 1584 aa9.8□□□□□ -0.84
LDHC-205ENST00000537486 CCDC88BA6NC98 1476 aa9.79□□□□□ -0.84
LDHC-205ENST00000537486 ABCC10Q5T3U5 1492 aa9.79□□□□□ -0.84
LDHC-205ENST00000537486 LMTK3Q96Q04 1460 aa9.79□□□□□ -0.84
LDHC-205ENST00000537486 TSPOAP1O95153 1857 aa9.77□□□□□ -0.85
LDHC-205ENST00000537486 FGD5Q6ZNL6 1462 aa9.77□□□□□ -0.85
LDHC-205ENST00000537486 SHROOM2Q13796 1616 aa9.76□□□□□ -0.85
LDHC-205ENST00000537486 FAM69CQ0P6D2 419 aa9.76□□□□□ -0.85
LDHC-205ENST00000537486 MAPKBP1O60336 1514 aa9.74□□□□□ -0.85
LDHC-205ENST00000537486 CNKSR2Q8WXI2 1034 aa9.72□□□□□ -0.85
LDHC-205ENST00000537486 RTN4Q9NQC3 1192 aaKnown RBP9.71□□□□□ -0.86
LDHC-205ENST00000537486 RNF216Q9NWF9 866 aaPredicted RBP9.71□□□□□ -0.86
LDHC-205ENST00000537486 GRIN2AQ12879 1464 aa9.71□□□□□ -0.86
LDHC-205ENST00000537486 C1QBPQ07021 282 aaKnown RBP9.7□□□□□ -0.86
LDHC-205ENST00000537486 ABCA5Q8WWZ7 1642 aa9.7□□□□□ -0.86
LDHC-205ENST00000537486 NUP160Q12769 1436 aa9.69□□□□□ -0.86
LDHC-205ENST00000537486 EHMT2Q96KQ7 1210 aa9.69□□□□□ -0.86
LDHC-205ENST00000537486 ADCY10Q96PN6 1610 aa9.67□□□□□ -0.86
LDHC-205ENST00000537486 ADAMTS12P58397 1594 aa9.67□□□□□ -0.86
LDHC-205ENST00000537486 CUX1P39880 1505 aa9.67□□□□□ -0.86
LDHC-205ENST00000537486 SOCS7O14512 581 aa9.67□□□□□ -0.86
LDHC-205ENST00000537486 ILDR2Q71H61 639 aa9.66□□□□□ -0.86
LDHC-205ENST00000537486 HOMEZQ8IX15 550 aa9.66□□□□□ -0.86
LDHC-205ENST00000537486 PPRC1Q5VV67 1664 aaKnown RBP9.64□□□□□ -0.87
LDHC-205ENST00000537486 PRG4Q92954 1404 aaPredicted RBP9.63□□□□□ -0.87
LDHC-205ENST00000537486 ANP32EQ9BTT0 268 aa9.61□□□□□ -0.87
LDHC-205ENST00000537486 NPM1P06748 294 aaKnown RBP eCLIP9.6□□□□□ -0.87
LDHC-205ENST00000537486 UBE2Q2Q8WVN8 375 aa9.6□□□□□ -0.87
LDHC-205ENST00000537486 ABCA10Q8WWZ4 1543 aa9.6□□□□□ -0.87
LDHC-205ENST00000537486 ACIN1Q9UKV3 1341 aaKnown RBP9.59□□□□□ -0.87
LDHC-205ENST00000537486 PPARGC1BQ86YN6 1023 aaKnown RBP9.58□□□□□ -0.88
LDHC-205ENST00000537486 DISP3Q9P2K9 1392 aa9.58□□□□□ -0.88
LDHC-205ENST00000537486 TOP2BQ02880 1626 aa9.57□□□□□ -0.88
LDHC-205ENST00000537486 COL17A1Q9UMD9 1497 aaPredicted RBP9.57□□□□□ -0.88
LDHC-205ENST00000537486 RUSC2Q8N2Y8 1516 aa9.56□□□□□ -0.88
LDHC-205ENST00000537486 FHAD1B1AJZ9 1412 aa9.54□□□□□ -0.88
LDHC-205ENST00000537486 SPATA31D1Q6ZQQ2 1576 aa9.54□□□□□ -0.88
LDHC-205ENST00000537486 GLI2P10070 1586 aa9.52□□□□□ -0.89
LDHC-205ENST00000537486 JPH4Q96JJ6 628 aa9.51□□□□□ -0.89
LDHC-205ENST00000537486 KIF21BO75037 1637 aa9.49□□□□□ -0.89
LDHC-205ENST00000537486 MAP3K4Q9Y6R4 1608 aa9.49□□□□□ -0.89
LDHC-205ENST00000537486 ASXL2Q76L83 1435 aa9.47□□□□□ -0.89
LDHC-205ENST00000537486 ERICH3Q5RHP9 1530 aa9.46□□□□□ -0.89
LDHC-205ENST00000537486 PCF11O94913 1555 aaKnown RBP9.46□□□□□ -0.89
LDHC-205ENST00000537486 CUL7Q14999 1698 aa9.46□□□□□ -0.89
LDHC-205ENST00000537486 ZEB1P37275 1124 aaPredicted RBP9.46□□□□□ -0.9
LDHC-205ENST00000537486 PLB1Q6P1J6 1458 aa9.45□□□□□ -0.9
LDHC-205ENST00000537486 TEX14Q8IWB6 1497 aa9.45□□□□□ -0.9
LDHC-205ENST00000537486 TIMELESSQ9UNS1 1208 aa9.44□□□□□ -0.9
LDHC-205ENST00000537486 ABCC2Q92887 1545 aa9.44□□□□□ -0.9
LDHC-205ENST00000537486 PTPRMP28827 1452 aa9.43□□□□□ -0.9
LDHC-205ENST00000537486 GTF3C3Q9Y5Q9 886 aa9.42□□□□□ -0.9
LDHC-205ENST00000537486 EPRSP07814 1512 aaKnown RBP9.41□□□□□ -0.9
LDHC-205ENST00000537486 PLEKHG5O94827 1062 aa9.41□□□□□ -0.9
LDHC-205ENST00000537486 ADAMTSL3P82987 1691 aa9.41□□□□□ -0.9
LDHC-205ENST00000537486 WRNQ14191 1432 aaPredicted RBP eCLIP9.4□□□□□ -0.9
LDHC-205ENST00000537486 CERKQ8TCT0 537 aa9.4□□□□□ -0.9
LDHC-205ENST00000537486 NEUROD1Q13562 356 aa9.39□□□□□ -0.91
LDHC-205ENST00000537486 CSRNP3Q8WYN3 585 aa9.39□□□□□ -0.91
LDHC-205ENST00000537486 KIAA0586Q9BVV6 1533 aa9.38□□□□□ -0.91
LDHC-205ENST00000537486 PODXL2Q9NZ53 605 aa9.37□□□□□ -0.91
LDHC-205ENST00000537486 BIVM-ERCC5R4GMW8 1640 aa9.37□□□□□ -0.91
LDHC-205ENST00000537486 PTPRGP23470 1445 aa9.37□□□□□ -0.91
LDHC-205ENST00000537486 MADDQ8WXG6 1647 aa9.36□□□□□ -0.91
LDHC-205ENST00000537486 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.36□□□□□ -0.91
LDHC-205ENST00000537486 ZCCHC11Q5TAX3 1644 aaKnown RBP9.34□□□□□ -0.91
LDHC-205ENST00000537486 UHRF1BP1LA0JNW5 1464 aa9.34□□□□□ -0.91
LDHC-205ENST00000537486 BCORL1Q5H9F3 1711 aa9.33□□□□□ -0.92
LDHC-205ENST00000537486 HSPA2P54652 639 aa9.32□□□□□ -0.92
LDHC-205ENST00000537486 BCANQ96GW7 911 aa9.32□□□□□ -0.92
LDHC-205ENST00000537486 RIMS1Q86UR5 1692 aaKnown RBP9.32□□□□□ -0.92
LDHC-205ENST00000537486 KDM5BQ9UGL1 1544 aa9.31□□□□□ -0.92
LDHC-205ENST00000537486 PKNOX2Q96KN3 472 aa9.31□□□□□ -0.92
LDHC-205ENST00000537486 FBXO3Q9UK99 471 aa9.31□□□□□ -0.92
LDHC-205ENST00000537486 TNIKQ9UKE5 1360 aa9.31□□□□□ -0.92
LDHC-205ENST00000537486 CFAP43Q8NDM7 1665 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms