RNA–Protein interactions for RNA: ENST00000537024.5

SNHG1-203, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 532 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-203ENST00000537024 DCAF8L2P0C7V8 631 aa8.98□□□□□ -0.97
SNHG1-203ENST00000537024 PLSCR2Q9NRY7 297 aa8.96□□□□□ -0.98
SNHG1-203ENST00000537024 STAG3Q9UJ98 1225 aa8.96□□□□□ -0.98
SNHG1-203ENST00000537024 OTUD5Q96G74 571 aa8.95□□□□□ -0.98
SNHG1-203ENST00000537024 POTEB2H3BUK9 544 aa8.94□□□□□ -0.98
SNHG1-203ENST00000537024 KLHL34Q8N239 644 aa8.94□□□□□ -0.98
SNHG1-203ENST00000537024 PLCB2Q00722 1185 aa8.92□□□□□ -0.98
SNHG1-203ENST00000537024 PHF12Q96QT6 1004 aa8.91□□□□□ -0.98
SNHG1-203ENST00000537024 PKD2Q13563 968 aa8.9□□□□□ -0.98
SNHG1-203ENST00000537024 UNC13AQ9UPW8 1703 aa8.9□□□□□ -0.98
SNHG1-203ENST00000537024 SPOCK2Q92563 424 aa8.89□□□□□ -0.99
SNHG1-203ENST00000537024 CECR2Q9BXF3 1484 aa8.89□□□□□ -0.99
SNHG1-203ENST00000537024 MNX1P50219 401 aaPredicted RBP8.87□□□□□ -0.99
SNHG1-203ENST00000537024 PELP1Q8IZL8 1130 aaKnown RBP8.87□□□□□ -0.99
SNHG1-203ENST00000537024 PLCD3Q8N3E9 789 aa8.87□□□□□ -0.99
SNHG1-203ENST00000537024 PAK3O75914 559 aaPredicted RBP8.86□□□□□ -0.99
SNHG1-203ENST00000537024 BICRAQ9NZM4 1560 aa8.85□□□□□ -0.99
SNHG1-203ENST00000537024 CC2D2AQ9P2K1 1620 aa8.83□□□□□ -1
SNHG1-203ENST00000537024 HAP1P54257 671 aaPredicted RBP8.83□□□□□ -1
SNHG1-203ENST00000537024 NACADO15069 1562 aa8.82□□□□□ -1
SNHG1-203ENST00000537024 MIER1Q8N108 512 aa8.82□□□□□ -1
SNHG1-203ENST00000537024 ECM2O94769 699 aaPredicted RBP8.81□□□□□ -1
SNHG1-203ENST00000537024 NPM1P06748 294 aaKnown RBP eCLIP8.81□□□□□ -1
SNHG1-203ENST00000537024 POTEMA6NI47 508 aa8.8□□□□□ -1
SNHG1-203ENST00000537024 PLEKHG5O94827 1062 aa8.78□□□□□ -1
SNHG1-203ENST00000537024 POTEJP0CG39 1038 aa8.78□□□□□ -1
SNHG1-203ENST00000537024 ASTLQ6HA08 431 aaPredicted RBP8.78□□□□□ -1
SNHG1-203ENST00000537024 POTEGQ6S5H5 508 aa8.78□□□□□ -1
SNHG1-203ENST00000537024 MS4A3Q96HJ5 214 aa8.77□□□□□ -1.01
SNHG1-203ENST00000537024 ATMINO43313 823 aaPredicted RBP8.76□□□□□ -1.01
SNHG1-203ENST00000537024 METRNQ9UJH8 293 aa8.76□□□□□ -1.01
SNHG1-203ENST00000537024 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.75□□□□□ -1.01
SNHG1-203ENST00000537024 ZBTB47Q9UFB7 747 aaPredicted RBP8.75□□□□□ -1.01
SNHG1-203ENST00000537024 CUX2O14529 1486 aa8.75□□□□□ -1.01
SNHG1-203ENST00000537024 C7P10643 843 aa8.74□□□□□ -1.01
SNHG1-203ENST00000537024 BBXQ8WY36 941 aaPredicted RBP8.72□□□□□ -1.01
SNHG1-203ENST00000537024 SLC39A7Q92504 469 aa8.72□□□□□ -1.01
SNHG1-203ENST00000537024 CIZ1Q9ULV3 898 aaPredicted RBP8.7□□□□□ -1.02
SNHG1-203ENST00000537024 RGL2O15211 777 aa8.68□□□□□ -1.02
SNHG1-203ENST00000537024 VSIG10Q8N0Z9 540 aa8.68□□□□□ -1.02
SNHG1-203ENST00000537024 TRIM41Q8WV44 630 aa8.68□□□□□ -1.02
SNHG1-203ENST00000537024 SHROOM4Q9ULL8 1493 aa8.68□□□□□ -1.02
SNHG1-203ENST00000537024 LCE2DQ5TA82 110 aaPredicted RBP8.67□□□□□ -1.02
SNHG1-203ENST00000537024 MAMSTRQ6ZN01 415 aa8.67□□□□□ -1.02
SNHG1-203ENST00000537024 TSPYL2Q9H2G4 693 aaPredicted RBP8.67□□□□□ -1.02
SNHG1-203ENST00000537024 PCDH10Q9P2E7 1040 aa8.67□□□□□ -1.02
SNHG1-203ENST00000537024 EIF4G1Q04637 1599 aaKnown RBP8.66□□□□□ -1.02
SNHG1-203ENST00000537024 ATN1P54259 1190 aaPredicted RBP8.66□□□□□ -1.02
SNHG1-203ENST00000537024 PAXIP1Q6ZW49 1069 aaPredicted RBP8.66□□□□□ -1.02
SNHG1-203ENST00000537024 CCDC61Q9Y6R9 512 aa8.66□□□□□ -1.02
SNHG1-203ENST00000537024 KIF12Q96FN5 646 aa8.65□□□□□ -1.02
SNHG1-203ENST00000537024 CFAP44Q96MT7 982 aa8.65□□□□□ -1.02
SNHG1-203ENST00000537024 POTEFA5A3E0 1075 aa8.63□□□□□ -1.03
SNHG1-203ENST00000537024 BCANQ96GW7 911 aa8.62□□□□□ -1.03
SNHG1-203ENST00000537024 FAM163AQ96GL9 167 aaPredicted RBP8.61□□□□□ -1.03
SNHG1-203ENST00000537024 BMP2KQ9NSY1 1161 aaPredicted RBP8.61□□□□□ -1.03
SNHG1-203ENST00000537024 TRPC6Q9Y210 931 aa8.61□□□□□ -1.03
SNHG1-203ENST00000537024 CHGAP10645 457 aaKnown RBP8.59□□□□□ -1.03
SNHG1-203ENST00000537024 SPRYD3Q8NCJ5 442 aa8.59□□□□□ -1.03
SNHG1-203ENST00000537024 SCUBE2Q9NQ36 999 aa8.59□□□□□ -1.03
SNHG1-203ENST00000537024 GSE1Q14687 1217 aa8.57□□□□□ -1.04
SNHG1-203ENST00000537024 MAP3K13O43283 966 aa8.56□□□□□ -1.04
SNHG1-203ENST00000537024 TIE1P35590 1138 aa8.55□□□□□ -1.04
SNHG1-203ENST00000537024 RASEFQ8IZ41 740 aa8.54□□□□□ -1.04
SNHG1-203ENST00000537024 COLQQ9Y215 455 aaPredicted RBP8.53□□□□□ -1.04
SNHG1-203ENST00000537024 KDM2AQ9Y2K7 1162 aa8.53□□□□□ -1.04
SNHG1-203ENST00000537024 MYO15BQ96JP2 1530 aa8.51□□□□□ -1.05
SNHG1-203ENST00000537024 TTLL13PA6NNM8 815 aa8.51□□□□□ -1.05
SNHG1-203ENST00000537024 NUBP1P53384 320 aa8.51□□□□□ -1.05
SNHG1-203ENST00000537024 DCAF8Q5TAQ9 597 aa8.51□□□□□ -1.05
SNHG1-203ENST00000537024 HS6ST3Q8IZP7 471 aa8.5□□□□□ -1.05
SNHG1-203ENST00000537024 TAOK2Q9UL54 1235 aa8.5□□□□□ -1.05
SNHG1-203ENST00000537024 TSHZ2Q9NRE2 1034 aa8.49□□□□□ -1.05
SNHG1-203ENST00000537024 ERCC6Q03468 1493 aa8.48□□□□□ -1.05
SNHG1-203ENST00000537024 FAM212AQ96EL1 285 aa8.47□□□□□ -1.05
SNHG1-203ENST00000537024 SEC24BO95487 1268 aa8.46□□□□□ -1.06
SNHG1-203ENST00000537024 RNF25Q96BH1 459 aaPredicted RBP8.46□□□□□ -1.06
SNHG1-203ENST00000537024 RIOK3O14730 519 aaKnown RBP8.45□□□□□ -1.06
SNHG1-203ENST00000537024 IER5LQ5T953 404 aa8.44□□□□□ -1.06
SNHG1-203ENST00000537024 TRIM35Q9UPQ4 493 aa8.44□□□□□ -1.06
SNHG1-203ENST00000537024 CDAN1Q8IWY9 1227 aa8.43□□□□□ -1.06
SNHG1-203ENST00000537024 SGIP1Q9BQI5 828 aa8.43□□□□□ -1.06
SNHG1-203ENST00000537024 PCDHB13Q9Y5F0 798 aa8.41□□□□□ -1.06
SNHG1-203ENST00000537024 PRKCSHP14314 528 aaPredicted RBP8.4□□□□□ -1.06
SNHG1-203ENST00000537024 VGFO15240 615 aaPredicted RBP8.39□□□□□ -1.07
SNHG1-203ENST00000537024 STK25O00506 426 aa8.38□□□□□ -1.07
SNHG1-203ENST00000537024 CHRM1P11229 460 aaPredicted RBP8.38□□□□□ -1.07
SNHG1-203ENST00000537024 IFNL1Q8IU54 200 aa8.38□□□□□ -1.07
SNHG1-203ENST00000537024 ST18O60284 1047 aa8.37□□□□□ -1.07
SNHG1-203ENST00000537024 SLAIN1Q8ND83 568 aa8.37□□□□□ -1.07
SNHG1-203ENST00000537024 NKX1-1Q15270 411 aaPredicted RBP8.35□□□□□ -1.07
SNHG1-203ENST00000537024 TPRNQ4KMQ1 711 aa8.35□□□□□ -1.07
SNHG1-203ENST00000537024 TMEM106CQ9BVX2 250 aa8.35□□□□□ -1.07
SNHG1-203ENST00000537024 THOC2Q8NI27 1593 aaKnown RBP8.35□□□□□ -1.07
SNHG1-203ENST00000537024 PYGBP11216 843 aa8.33□□□□□ -1.08
SNHG1-203ENST00000537024 IRX5P78411 483 aaPredicted RBP8.33□□□□□ -1.08
SNHG1-203ENST00000537024 NBR1Q14596 966 aa8.33□□□□□ -1.08
SNHG1-203ENST00000537024 GTPBP6O43824 516 aaPredicted RBP8.32□□□□□ -1.08
SNHG1-203ENST00000537024 PLCG2P16885 1265 aa8.32□□□□□ -1.08
SNHG1-203ENST00000537024 STK24Q9Y6E0 443 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms