RNA–Protein interactions for RNA: ENST00000534389.2

CSDE1-216, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-216ENST00000534389 PKD2Q13563 968 aa6.46□□□□□ -1.38
CSDE1-216ENST00000534389 TSPYL2Q9H2G4 693 aaPredicted RBP6.45□□□□□ -1.38
CSDE1-216ENST00000534389 CD44P16070 742 aaKnown RBP6.44□□□□□ -1.38
CSDE1-216ENST00000534389 TRIM41Q8WV44 630 aa6.44□□□□□ -1.38
CSDE1-216ENST00000534389 C19orf67A6NJJ6 358 aa6.43□□□□□ -1.38
CSDE1-216ENST00000534389 HAX1O00165 279 aa6.43□□□□□ -1.38
CSDE1-216ENST00000534389 PAK3O75914 559 aaPredicted RBP6.43□□□□□ -1.38
CSDE1-216ENST00000534389 SLC24A1O60721 1099 aa6.42□□□□□ -1.38
CSDE1-216ENST00000534389 ZRANB1Q9UGI0 708 aa6.41□□□□□ -1.38
CSDE1-216ENST00000534389 TAOK2Q9UL54 1235 aa6.41□□□□□ -1.38
CSDE1-216ENST00000534389 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.4□□□□□ -1.38
CSDE1-216ENST00000534389 RGL2O15211 777 aa6.38□□□□□ -1.39
CSDE1-216ENST00000534389 EVX2Q03828 476 aa6.38□□□□□ -1.39
CSDE1-216ENST00000534389 CCDC61Q9Y6R9 512 aa6.38□□□□□ -1.39
CSDE1-216ENST00000534389 PYGBP11216 843 aa6.37□□□□□ -1.39
CSDE1-216ENST00000534389 PHF12Q96QT6 1004 aa6.37□□□□□ -1.39
CSDE1-216ENST00000534389 CHGAP10645 457 aaKnown RBP6.36□□□□□ -1.39
CSDE1-216ENST00000534389 ZNF579Q8NAF0 562 aaKnown RBP6.35□□□□□ -1.39
CSDE1-216ENST00000534389 RIOK3O14730 519 aaKnown RBP6.33□□□□□ -1.4
CSDE1-216ENST00000534389 HAP1P54257 671 aaPredicted RBP6.32□□□□□ -1.4
CSDE1-216ENST00000534389 KIF12Q96FN5 646 aa6.32□□□□□ -1.4
CSDE1-216ENST00000534389 MAP3K13O43283 966 aa6.31□□□□□ -1.4
CSDE1-216ENST00000534389 CHRM1P11229 460 aaPredicted RBP6.31□□□□□ -1.4
CSDE1-216ENST00000534389 BBXQ8WY36 941 aaPredicted RBP6.31□□□□□ -1.4
CSDE1-216ENST00000534389 CFAP44Q96MT7 982 aa6.31□□□□□ -1.4
CSDE1-216ENST00000534389 STK25O00506 426 aa6.3□□□□□ -1.4
CSDE1-216ENST00000534389 PLCB2Q00722 1185 aa6.3□□□□□ -1.4
CSDE1-216ENST00000534389 RNF25Q96BH1 459 aaPredicted RBP6.3□□□□□ -1.4
CSDE1-216ENST00000534389 PCDHB13Q9Y5F0 798 aa6.3□□□□□ -1.4
CSDE1-216ENST00000534389 VGFO15240 615 aaPredicted RBP6.29□□□□□ -1.4
CSDE1-216ENST00000534389 PAXIP1Q6ZW49 1069 aaPredicted RBP6.29□□□□□ -1.4
CSDE1-216ENST00000534389 ZNF467Q7Z7K2 595 aaPredicted RBP6.28□□□□□ -1.4
CSDE1-216ENST00000534389 IFNL1Q8IU54 200 aa6.28□□□□□ -1.4
CSDE1-216ENST00000534389 MS4A3Q96HJ5 214 aa6.28□□□□□ -1.4
CSDE1-216ENST00000534389 PCDHB8Q9UN66 801 aa6.28□□□□□ -1.4
CSDE1-216ENST00000534389 GALR2O43603 387 aaPredicted RBP6.26□□□□□ -1.41
CSDE1-216ENST00000534389 SPRYD3Q8NCJ5 442 aa6.26□□□□□ -1.41
CSDE1-216ENST00000534389 SGIP1Q9BQI5 828 aa6.26□□□□□ -1.41
CSDE1-216ENST00000534389 STK24Q9Y6E0 443 aa6.26□□□□□ -1.41
CSDE1-216ENST00000534389 GABBR2O75899 941 aa6.25□□□□□ -1.41
CSDE1-216ENST00000534389 HS6ST3Q8IZP7 471 aa6.24□□□□□ -1.41
CSDE1-216ENST00000534389 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.23□□□□□ -1.41
CSDE1-216ENST00000534389 CLCN6P51797 869 aa6.23□□□□□ -1.41
CSDE1-216ENST00000534389 ZFP91Q96JP5 570 aaPredicted RBP6.23□□□□□ -1.41
CSDE1-216ENST00000534389 BCL11BQ9C0K0 894 aaPredicted RBP6.23□□□□□ -1.41
CSDE1-216ENST00000534389 TRPC6Q9Y210 931 aa6.23□□□□□ -1.41
CSDE1-216ENST00000534389 PDAP1Q13442 181 aaKnown RBP6.22□□□□□ -1.41
CSDE1-216ENST00000534389 PSEN1P49768 467 aa6.21□□□□□ -1.42
CSDE1-216ENST00000534389 GOLGA2Q08379 1002 aa6.21□□□□□ -1.42
CSDE1-216ENST00000534389 RYDENQ9NUL5 291 aaKnown RBP6.2□□□□□ -1.42
CSDE1-216ENST00000534389 TMEM106CQ9BVX2 250 aa6.19□□□□□ -1.42
CSDE1-216ENST00000534389 BMP2KQ9NSY1 1161 aaPredicted RBP6.19□□□□□ -1.42
CSDE1-216ENST00000534389 TTLL13PA6NNM8 815 aa6.17□□□□□ -1.42
CSDE1-216ENST00000534389 TIE1P35590 1138 aa6.17□□□□□ -1.42
CSDE1-216ENST00000534389 DCBLD2Q96PD2 775 aa6.17□□□□□ -1.42
CSDE1-216ENST00000534389 ATMINO43313 823 aaPredicted RBP6.14□□□□□ -1.43
CSDE1-216ENST00000534389 ATN1P54259 1190 aaPredicted RBP6.14□□□□□ -1.43
CSDE1-216ENST00000534389 CABP2Q9NPB3 220 aa6.14□□□□□ -1.43
CSDE1-216ENST00000534389 POTEIP0CG38 1075 aa6.13□□□□□ -1.43
CSDE1-216ENST00000534389 ASTLQ6HA08 431 aaPredicted RBP6.13□□□□□ -1.43
CSDE1-216ENST00000534389 VSIG10Q8N0Z9 540 aa6.13□□□□□ -1.43
CSDE1-216ENST00000534389 TRIM35Q9UPQ4 493 aa6.13□□□□□ -1.43
CSDE1-216ENST00000534389 MKRN3Q13064 507 aaKnown RBP6.11□□□□□ -1.43
CSDE1-216ENST00000534389 LHX8Q68G74 356 aa6.11□□□□□ -1.43
CSDE1-216ENST00000534389 PELP1Q8IZL8 1130 aaKnown RBP6.1□□□□□ -1.43
CSDE1-216ENST00000534389 EFCAB3Q8N7B9 438 aa6.1□□□□□ -1.43
CSDE1-216ENST00000534389 TSHZ2Q9NRE2 1034 aa6.1□□□□□ -1.43
CSDE1-216ENST00000534389 NKX1-1Q15270 411 aaPredicted RBP6.09□□□□□ -1.43
CSDE1-216ENST00000534389 DNAJC5Q9H3Z4 198 aa6.09□□□□□ -1.43
CSDE1-216ENST00000534389 GTPBP6O43824 516 aaPredicted RBP6.08□□□□□ -1.44
CSDE1-216ENST00000534389 NLRP6P59044 892 aa6.08□□□□□ -1.44
CSDE1-216ENST00000534389 SOX12O15370 315 aa6.06□□□□□ -1.44
CSDE1-216ENST00000534389 WDR70Q9NW82 654 aa6.06□□□□□ -1.44
CSDE1-216ENST00000534389 PHF8Q9UPP1 1060 aa6.06□□□□□ -1.44
CSDE1-216ENST00000534389 IER5LQ5T953 404 aa6.05□□□□□ -1.44
CSDE1-216ENST00000534389 SLC39A7Q92504 469 aa6.05□□□□□ -1.44
CSDE1-216ENST00000534389 MFRPQ9BY79 579 aa6.05□□□□□ -1.44
CSDE1-216ENST00000534389 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.05□□□□□ -1.441e-11■□□□□ 10.6
CSDE1-216ENST00000534389 METRNQ9UJH8 293 aa6.05□□□□□ -1.44
CSDE1-216ENST00000534389 G3V3G9 751 aa6.03□□□□□ -1.44
CSDE1-216ENST00000534389 C7P10643 843 aa6.03□□□□□ -1.44
CSDE1-216ENST00000534389 PLCG2P16885 1265 aa6.03□□□□□ -1.44
CSDE1-216ENST00000534389 IRX5P78411 483 aaPredicted RBP6.03□□□□□ -1.44
CSDE1-216ENST00000534389 FBXO22Q8NEZ5 403 aa6.03□□□□□ -1.44
CSDE1-216ENST00000534389 SEC24BO95487 1268 aa6.02□□□□□ -1.45
CSDE1-216ENST00000534389 BCANQ96GW7 911 aa6.02□□□□□ -1.45
CSDE1-216ENST00000534389 MS4A4AQ96JQ5 239 aa6.02□□□□□ -1.45
CSDE1-216ENST00000534389 COLQQ9Y215 455 aaPredicted RBP6.02□□□□□ -1.45
CSDE1-216ENST00000534389 POTEFA5A3E0 1075 aa6.01□□□□□ -1.45
CSDE1-216ENST00000534389 NBR1Q14596 966 aa6.01□□□□□ -1.45
CSDE1-216ENST00000534389 ILDR1Q86SU0 546 aaPredicted RBP6.01□□□□□ -1.45
CSDE1-216ENST00000534389 PDCD7Q8N8D1 485 aaKnown RBP6.01□□□□□ -1.45
CSDE1-216ENST00000534389 OCEL1Q9H607 264 aa6.01□□□□□ -1.45
CSDE1-216ENST00000534389 DPY19L2Q6NUT2 758 aa6□□□□□ -1.45
CSDE1-216ENST00000534389 KDM2AQ9Y2K7 1162 aa6□□□□□ -1.45
CSDE1-216ENST00000534389 PPP1R37O75864 691 aa5.98□□□□□ -1.45
CSDE1-216ENST00000534389 P3H3Q8IVL6 736 aa5.95□□□□□ -1.46
CSDE1-216ENST00000534389 BOLA1Q9Y3E2 137 aa5.94□□□□□ -1.46
CSDE1-216ENST00000534389 POTEB2H3BUK9 544 aa5.93□□□□□ -1.46
CSDE1-216ENST00000534389 MICALL2Q8IY33 904 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms