RNA–Protein interactions for RNA: ENST00000533131.5

BDNF-217, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-217ENST00000533131 A0A0U1RQG5 324 aaPredicted RBP10.09□□□□□ -0.79
BDNF-217ENST00000533131 ZNF428Q96B54 188 aa10.08□□□□□ -0.8
BDNF-217ENST00000533131 ECM2O94769 699 aaPredicted RBP10.08□□□□□ -0.8
BDNF-217ENST00000533131 RSPH6AQ9H0K4 717 aa10.07□□□□□ -0.8
BDNF-217ENST00000533131 CHGAP10645 457 aaKnown RBP10.05□□□□□ -0.8
BDNF-217ENST00000533131 FOXD4L5Q5VV16 416 aaPredicted RBP10.05□□□□□ -0.8
BDNF-217ENST00000533131 FOXD4L4Q8WXT5 416 aaPredicted RBP10.05□□□□□ -0.8
BDNF-217ENST00000533131 RB1CC1Q8TDY2 1594 aa10.04□□□□□ -0.8
BDNF-217ENST00000533131 APBB1O00213 710 aa10.04□□□□□ -0.8
BDNF-217ENST00000533131 NECTIN2Q92692 538 aa10.04□□□□□ -0.8
BDNF-217ENST00000533131 BRPF1P55201 1214 aaPredicted RBP10.04□□□□□ -0.8
BDNF-217ENST00000533131 NACADO15069 1562 aa10.03□□□□□ -0.8
BDNF-217ENST00000533131 ZCCHC6Q5VYS8 1495 aaKnown RBP10.03□□□□□ -0.8
BDNF-217ENST00000533131 TAF7LQ5H9L4 462 aa10.03□□□□□ -0.8
BDNF-217ENST00000533131 ZNF526Q8TF50 670 aaPredicted RBP10.01□□□□□ -0.81
BDNF-217ENST00000533131 BICRAQ9NZM4 1560 aa10.01□□□□□ -0.81
BDNF-217ENST00000533131 VASPP50552 380 aaPredicted RBP10.01□□□□□ -0.81
BDNF-217ENST00000533131 ARID4BQ4LE39 1312 aaPredicted RBP10.01□□□□□ -0.81
BDNF-217ENST00000533131 MYO15BQ96JP2 1530 aa10□□□□□ -0.81
BDNF-217ENST00000533131 PPM1GO15355 546 aaPredicted RBP9.99□□□□□ -0.81
BDNF-217ENST00000533131 IRX6P78412 446 aaPredicted RBP9.99□□□□□ -0.81
BDNF-217ENST00000533131 TRIM41Q8WV44 630 aa9.99□□□□□ -0.81
BDNF-217ENST00000533131 ZMYND15Q9H091 742 aa9.98□□□□□ -0.81
BDNF-217ENST00000533131 IFNLR1Q8IU57 520 aaPredicted RBP9.96□□□□□ -0.81
BDNF-217ENST00000533131 CCDC136Q96JN2 1154 aa9.96□□□□□ -0.82
BDNF-217ENST00000533131 MTMR7Q9Y216 660 aa9.95□□□□□ -0.82
BDNF-217ENST00000533131 DCAF1Q9Y4B6 1507 aa9.94□□□□□ -0.82
BDNF-217ENST00000533131 BCL11BQ9C0K0 894 aaPredicted RBP9.92□□□□□ -0.82
BDNF-217ENST00000533131 C1orf115Q9H7X2 142 aa9.91□□□□□ -0.82
BDNF-217ENST00000533131 DNAJC5BQ9UF47 199 aa9.89□□□□□ -0.83
BDNF-217ENST00000533131 PUS7Q96PZ0 661 aaKnown RBP9.88□□□□□ -0.83
BDNF-217ENST00000533131 TMCO4Q5TGY1 634 aa9.87□□□□□ -0.83
BDNF-217ENST00000533131 LMOD2Q6P5Q4 547 aa9.87□□□□□ -0.83
BDNF-217ENST00000533131 CCER1Q8TC90 406 aaPredicted RBP9.87□□□□□ -0.83
BDNF-217ENST00000533131 RGL2O15211 777 aa9.86□□□□□ -0.83
BDNF-217ENST00000533131 PKNOX2Q96KN3 472 aa9.86□□□□□ -0.83
BDNF-217ENST00000533131 ZEB1P37275 1124 aaPredicted RBP9.85□□□□□ -0.83
BDNF-217ENST00000533131 CWC22Q9HCG8 908 aaKnown RBP9.83□□□□□ -0.84
BDNF-217ENST00000533131 PIAS4Q8N2W9 510 aaPredicted RBP9.83□□□□□ -0.84
BDNF-217ENST00000533131 WDR70Q9NW82 654 aa9.83□□□□□ -0.84
BDNF-217ENST00000533131 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.81□□□□□ -0.84
BDNF-217ENST00000533131 ZNF592Q92610 1267 aa9.81□□□□□ -0.84
BDNF-217ENST00000533131 IL27Q8NEV9 243 aa9.8□□□□□ -0.84
BDNF-217ENST00000533131 YTHDC1Q96MU7 727 aaKnown RBP9.8□□□□□ -0.84
BDNF-217ENST00000533131 SLC24A3Q9HC58 644 aa9.8□□□□□ -0.84
BDNF-217ENST00000533131 GZF1Q9H116 711 aaPredicted RBP9.79□□□□□ -0.84
BDNF-217ENST00000533131 SCRIBQ14160 1630 aa9.78□□□□□ -0.84
BDNF-217ENST00000533131 PSMD1Q99460 953 aa9.78□□□□□ -0.84
BDNF-217ENST00000533131 E9PSI1 815 aa9.77□□□□□ -0.85
BDNF-217ENST00000533131 SCAF1Q9H7N4 1312 aaKnown RBP9.76□□□□□ -0.85
BDNF-217ENST00000533131 MFAP1P55081 439 aaKnown RBP9.76□□□□□ -0.85
BDNF-217ENST00000533131 FBXW7Q969H0 707 aa9.76□□□□□ -0.85
BDNF-217ENST00000533131 CCDC82Q8N4S0 544 aa9.76□□□□□ -0.85
BDNF-217ENST00000533131 PABPN1Q86U42 306 aaKnown RBP eCLIP9.75□□□□□ -0.85
BDNF-217ENST00000533131 ZFP91Q96JP5 570 aaPredicted RBP9.74□□□□□ -0.85
BDNF-217ENST00000533131 FAM177A1Q8N128 213 aaPredicted RBP9.72□□□□□ -0.85
BDNF-217ENST00000533131 ZNF326Q5BKZ1 582 aaKnown RBP9.72□□□□□ -0.85
BDNF-217ENST00000533131 BRPF3Q9ULD4 1205 aa9.72□□□□□ -0.85
BDNF-217ENST00000533131 NAP1L5Q96NT1 182 aaPredicted RBP9.71□□□□□ -0.86
BDNF-217ENST00000533131 CIZ1Q9ULV3 898 aaPredicted RBP9.7□□□□□ -0.86
BDNF-217ENST00000533131 GPBP1L1Q9HC44 474 aaPredicted RBP9.68□□□□□ -0.86
BDNF-217ENST00000533131 BCCIPQ9P287 314 aaKnown RBP eCLIP9.68□□□□□ -0.86
BDNF-217ENST00000533131 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.68□□□□□ -0.86
BDNF-217ENST00000533131 FOXD1Q16676 465 aa9.66□□□□□ -0.86
BDNF-217ENST00000533131 SPDYE4A6NLX3 237 aa9.66□□□□□ -0.86
BDNF-217ENST00000533131 CENPBP07199 599 aaPredicted RBP9.65□□□□□ -0.86
BDNF-217ENST00000533131 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.64□□□□□ -0.87
BDNF-217ENST00000533131 PPP1R1BQ9UD71 204 aaPredicted RBP9.64□□□□□ -0.87
BDNF-217ENST00000533131 MYCNP04198 464 aaPredicted RBP9.63□□□□□ -0.87
BDNF-217ENST00000533131 CERS3Q8IU89 383 aa9.63□□□□□ -0.87
BDNF-217ENST00000533131 ATXN8OSP0DMR3 200 aa9.62□□□□□ -0.87
BDNF-217ENST00000533131 EIF4G1Q04637 1599 aaKnown RBP9.61□□□□□ -0.87
BDNF-217ENST00000533131 CC2D2AQ9P2K1 1620 aa9.61□□□□□ -0.87
BDNF-217ENST00000533131 MAPK8IP2Q13387 824 aaPredicted RBP9.61□□□□□ -0.87
BDNF-217ENST00000533131 HNRNPUL2Q1KMD3 747 aaKnown RBP9.61□□□□□ -0.87
BDNF-217ENST00000533131 RGS22Q8NE09 1264 aa9.6□□□□□ -0.87
BDNF-217ENST00000533131 KDM4AO75164 1064 aa9.6□□□□□ -0.87
BDNF-217ENST00000533131 DIEXFQ68CQ4 756 aaKnown RBP9.6□□□□□ -0.87
BDNF-217ENST00000533131 CLSTN1O94985 981 aa9.59□□□□□ -0.87
BDNF-217ENST00000533131 MKRN3Q13064 507 aaKnown RBP9.59□□□□□ -0.87
BDNF-217ENST00000533131 ZNF692Q9BU19 519 aaPredicted RBP9.59□□□□□ -0.87
BDNF-217ENST00000533131 PRDM10Q9NQV6 1147 aa9.59□□□□□ -0.87
BDNF-217ENST00000533131 SPOCK2Q92563 424 aa9.57□□□□□ -0.88
BDNF-217ENST00000533131 FGD1P98174 961 aa9.57□□□□□ -0.88
BDNF-217ENST00000533131 TICAM2Q86XR7 235 aa9.57□□□□□ -0.88
BDNF-217ENST00000533131 SLC4A2P04920 1241 aa9.57□□□□□ -0.88
BDNF-217ENST00000533131 ZNF316A6NFI3 1004 aaPredicted RBP9.55□□□□□ -0.88
BDNF-217ENST00000533131 PTMSP20962 102 aa9.55□□□□□ -0.88
BDNF-217ENST00000533131 ZNF777Q9ULD5 760 aaPredicted RBP9.54□□□□□ -0.88
BDNF-217ENST00000533131 NEUROD1Q13562 356 aa9.54□□□□□ -0.88
BDNF-217ENST00000533131 TMED8Q6PL24 325 aaPredicted RBP9.54□□□□□ -0.88
BDNF-217ENST00000533131 CLUAP1Q96AJ1 413 aa9.53□□□□□ -0.88
BDNF-217ENST00000533131 DNAJC5Q9H3Z4 198 aa9.53□□□□□ -0.88
BDNF-217ENST00000533131 ATP1B4Q9UN42 357 aaPredicted RBP9.53□□□□□ -0.88
BDNF-217ENST00000533131 ZC3H15Q8WU90 426 aaKnown RBP9.53□□□□□ -0.88
BDNF-217ENST00000533131 RSPH4AQ5TD94 716 aa9.53□□□□□ -0.88
BDNF-217ENST00000533131 NCLP19338 710 aaKnown RBP9.51□□□□□ -0.89
BDNF-217ENST00000533131 CCDC97Q96F63 343 aaPredicted RBP9.51□□□□□ -0.89
BDNF-217ENST00000533131 P3H3Q8IVL6 736 aa9.5□□□□□ -0.89
BDNF-217ENST00000533131 ATF5Q9Y2D1 282 aaPredicted RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms