RNA–Protein interactions for RNA: ENST00000530720.1

CTNND1-226, Transcript of catenin delta 1, humanhuman

TSL 4

Gene CTNND1, Length 832 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-226ENST00000530720 SMARCA2P51531 1590 aa9.04□□□□□ -0.96
CTNND1-226ENST00000530720 STAG3Q9UJ98 1225 aa9.04□□□□□ -0.96
CTNND1-226ENST00000530720 PEG3Q9GZU2 1588 aa9.03□□□□□ -0.96
CTNND1-226ENST00000530720 NESP48681 1621 aa9.02□□□□□ -0.96
CTNND1-226ENST00000530720 CD44P16070 742 aaKnown RBP9.01□□□□□ -0.97
CTNND1-226ENST00000530720 BAZ1AQ9NRL2 1556 aaPredicted RBP9.01□□□□□ -0.97
CTNND1-226ENST00000530720 ERCC6Q03468 1493 aa9□□□□□ -0.97
CTNND1-226ENST00000530720 CREBZFQ9NS37 354 aa8.99□□□□□ -0.97
CTNND1-226ENST00000530720 BAZ1BQ9UIG0 1483 aaKnown RBP8.98□□□□□ -0.97
CTNND1-226ENST00000530720 MROH2BQ7Z745 1585 aa8.97□□□□□ -0.97
CTNND1-226ENST00000530720 THOC2Q8NI27 1593 aaKnown RBP8.97□□□□□ -0.97
CTNND1-226ENST00000530720 CLCN6P51797 869 aa8.93□□□□□ -0.98
CTNND1-226ENST00000530720 LAMC3Q9Y6N6 1575 aa8.93□□□□□ -0.98
CTNND1-226ENST00000530720 KIF21AQ7Z4S6 1674 aa8.91□□□□□ -0.98
CTNND1-226ENST00000530720 ZNF579Q8NAF0 562 aaKnown RBP8.88□□□□□ -0.99
CTNND1-226ENST00000530720 ZRANB1Q9UGI0 708 aa8.88□□□□□ -0.99
CTNND1-226ENST00000530720 POTEIP0CG38 1075 aa8.87□□□□□ -0.99
CTNND1-226ENST00000530720 WIZO95785 1651 aa8.86□□□□□ -0.99
CTNND1-226ENST00000530720 PROM2Q8N271 834 aa8.86□□□□□ -0.99
CTNND1-226ENST00000530720 MNX1P50219 401 aaPredicted RBP8.84□□□□□ -0.99
CTNND1-226ENST00000530720 LHX8Q68G74 356 aa8.84□□□□□ -0.99
CTNND1-226ENST00000530720 PDS5BQ9NTI5 1447 aa8.83□□□□□ -1
CTNND1-226ENST00000530720 CADPSQ9ULU8 1353 aa8.83□□□□□ -1
CTNND1-226ENST00000530720 WDR62O43379 1518 aa8.82□□□□□ -1
CTNND1-226ENST00000530720 NPM1P06748 294 aaKnown RBP eCLIP8.82□□□□□ -1
CTNND1-226ENST00000530720 PAK3O75914 559 aaPredicted RBP8.8□□□□□ -1
CTNND1-226ENST00000530720 DCBLD2Q96PD2 775 aa8.8□□□□□ -1
CTNND1-226ENST00000530720 MRC2Q9UBG0 1479 aa8.8□□□□□ -1
CTNND1-226ENST00000530720 GALR2O43603 387 aaPredicted RBP8.77□□□□□ -1.01
CTNND1-226ENST00000530720 RSF1Q96T23 1441 aaPredicted RBP8.75□□□□□ -1.01
CTNND1-226ENST00000530720 CFTRP13569 1480 aa8.75□□□□□ -1.01
CTNND1-226ENST00000530720 PHF12Q96QT6 1004 aa8.74□□□□□ -1.01
CTNND1-226ENST00000530720 CEP164Q9UPV0 1460 aa8.74□□□□□ -1.01
CTNND1-226ENST00000530720 FANCD2Q9BXW9 1451 aa8.73□□□□□ -1.01
CTNND1-226ENST00000530720 TOP2AP11388 1531 aaKnown RBP8.73□□□□□ -1.01
CTNND1-226ENST00000530720 URB2Q14146 1524 aaKnown RBP8.7□□□□□ -1.02
CTNND1-226ENST00000530720 PRDM2Q13029 1718 aa8.67□□□□□ -1.02
CTNND1-226ENST00000530720 PLEKHG5O94827 1062 aa8.65□□□□□ -1.02
CTNND1-226ENST00000530720 MIER1Q8N108 512 aa8.65□□□□□ -1.02
CTNND1-226ENST00000530720 TSPYL2Q9H2G4 693 aaPredicted RBP8.65□□□□□ -1.02
CTNND1-226ENST00000530720 MS4A3Q96HJ5 214 aa8.64□□□□□ -1.03
CTNND1-226ENST00000530720 CCDC61Q9Y6R9 512 aa8.63□□□□□ -1.03
CTNND1-226ENST00000530720 CCDC88BA6NC98 1476 aa8.63□□□□□ -1.03
CTNND1-226ENST00000530720 TRIM41Q8WV44 630 aa8.61□□□□□ -1.03
CTNND1-226ENST00000530720 PELP1Q8IZL8 1130 aaKnown RBP8.6□□□□□ -1.03
CTNND1-226ENST00000530720 ZNF608Q9ULD9 1512 aaPredicted RBP8.59□□□□□ -1.03
CTNND1-226ENST00000530720 ASTLQ6HA08 431 aaPredicted RBP8.59□□□□□ -1.03
CTNND1-226ENST00000530720 FKBP8Q14318 412 aa8.58□□□□□ -1.04
CTNND1-226ENST00000530720 KIF12Q96FN5 646 aa8.58□□□□□ -1.04
CTNND1-226ENST00000530720 TOPBP1Q92547 1522 aa8.58□□□□□ -1.04
CTNND1-226ENST00000530720 POTEB2H3BUK9 544 aa8.57□□□□□ -1.04
CTNND1-226ENST00000530720 ATMINO43313 823 aaPredicted RBP8.57□□□□□ -1.04
CTNND1-226ENST00000530720 PLCD3Q8N3E9 789 aa8.57□□□□□ -1.04
CTNND1-226ENST00000530720 IFT140Q96RY7 1462 aa8.57□□□□□ -1.04
CTNND1-226ENST00000530720 RASEFQ8IZ41 740 aa8.56□□□□□ -1.04
CTNND1-226ENST00000530720 EIF4G3O43432 1585 aaKnown RBP8.56□□□□□ -1.04
CTNND1-226ENST00000530720 RIMBP3CA6NJZ7 1639 aa8.55□□□□□ -1.04
CTNND1-226ENST00000530720 RIMBP3BA6NNM3 1639 aa8.55□□□□□ -1.04
CTNND1-226ENST00000530720 RIMBP3Q9UFD9 1639 aa8.55□□□□□ -1.04
CTNND1-226ENST00000530720 TARBP1Q13395 1621 aaKnown RBP8.54□□□□□ -1.04
CTNND1-226ENST00000530720 DNMBPQ6XZF7 1577 aa8.54□□□□□ -1.04
CTNND1-226ENST00000530720 OTUD5Q96G74 571 aa8.54□□□□□ -1.04
CTNND1-226ENST00000530720 SLC39A7Q92504 469 aa8.53□□□□□ -1.04
CTNND1-226ENST00000530720 ZBTB47Q9UFB7 747 aaPredicted RBP8.53□□□□□ -1.04
CTNND1-226ENST00000530720 METRNQ9UJH8 293 aa8.53□□□□□ -1.04
CTNND1-226ENST00000530720 MAP3K13O43283 966 aa8.52□□□□□ -1.05
CTNND1-226ENST00000530720 C7P10643 843 aa8.52□□□□□ -1.05
CTNND1-226ENST00000530720 ARHGEF11O15085 1522 aa8.51□□□□□ -1.05
CTNND1-226ENST00000530720 ATN1P54259 1190 aaPredicted RBP8.51□□□□□ -1.05
CTNND1-226ENST00000530720 ABCC8Q09428 1581 aa8.51□□□□□ -1.05
CTNND1-226ENST00000530720 CHD1O14646 1710 aa8.5□□□□□ -1.05
CTNND1-226ENST00000530720 NUBP1P53384 320 aa8.5□□□□□ -1.05
CTNND1-226ENST00000530720 POLA1P09884 1462 aaPredicted RBP8.49□□□□□ -1.05
CTNND1-226ENST00000530720 BMP2KQ9NSY1 1161 aaPredicted RBP8.48□□□□□ -1.05
CTNND1-226ENST00000530720 TRPC6Q9Y210 931 aa8.48□□□□□ -1.05
CTNND1-226ENST00000530720 AQRO60306 1485 aaKnown RBP eCLIP8.48□□□□□ -1.052e-14■■□□□ 12.2
CTNND1-226ENST00000530720 TIE1P35590 1138 aa8.47□□□□□ -1.05
CTNND1-226ENST00000530720 RAD54L2Q9Y4B4 1467 aa8.45□□□□□ -1.06
CTNND1-226ENST00000530720 SGIP1Q9BQI5 828 aa8.45□□□□□ -1.06
CTNND1-226ENST00000530720 POTEJP0CG39 1038 aa8.44□□□□□ -1.06
CTNND1-226ENST00000530720 ARAP1Q96P48 1450 aa8.44□□□□□ -1.06
CTNND1-226ENST00000530720 FAM212AQ96EL1 285 aa8.43□□□□□ -1.06
CTNND1-226ENST00000530720 FGD5Q6ZNL6 1462 aa8.43□□□□□ -1.06
CTNND1-226ENST00000530720 CUX1P39880 1505 aa8.43□□□□□ -1.06
CTNND1-226ENST00000530720 WDR97A6NE52 1622 aa8.43□□□□□ -1.06
CTNND1-226ENST00000530720 TTLL13PA6NNM8 815 aa8.42□□□□□ -1.06
CTNND1-226ENST00000530720 FBXO3Q9UK99 471 aa8.42□□□□□ -1.06
CTNND1-226ENST00000530720 PCDHB13Q9Y5F0 798 aa8.42□□□□□ -1.06
CTNND1-226ENST00000530720 CLASP1Q7Z460 1538 aa8.42□□□□□ -1.06
CTNND1-226ENST00000530720 POTEFA5A3E0 1075 aa8.41□□□□□ -1.06
CTNND1-226ENST00000530720 MAMSTRQ6ZN01 415 aa8.41□□□□□ -1.06
CTNND1-226ENST00000530720 SNAPC4Q5SXM2 1469 aa8.4□□□□□ -1.06
CTNND1-226ENST00000530720 SOGA1O94964 1423 aa8.4□□□□□ -1.06
CTNND1-226ENST00000530720 TDRD9Q8NDG6 1382 aaKnown RBP8.4□□□□□ -1.06
CTNND1-226ENST00000530720 IFNL1Q8IU54 200 aa8.38□□□□□ -1.07
CTNND1-226ENST00000530720 CYB5RLQ6IPT4 315 aa8.37□□□□□ -1.07
CTNND1-226ENST00000530720 MAGI1Q96QZ7 1491 aaPredicted RBP8.37□□□□□ -1.07
CTNND1-226ENST00000530720 SCUBE2Q9NQ36 999 aa8.36□□□□□ -1.07
CTNND1-226ENST00000530720 TRIM35Q9UPQ4 493 aa8.36□□□□□ -1.07
CTNND1-226ENST00000530720 PBRM1Q86U86 1689 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms