RNA–Protein interactions for RNA: ENST00000530658.1

LGR4-206, Transcript of leucine rich repeat containing G protein-coupled receptor 4, human

TSL 4

Gene LGR4, Length 553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LGR4-206	ENST00000530658	ECM2	O94769	699 aa	Predicted RBP	9.61	□□□□□ -0.87
LGR4-206	ENST00000530658	CLCN6	P51797	869 aa		9.61	□□□□□ -0.87
LGR4-206	ENST00000530658	CIZ1	Q9ULV3	898 aa	Predicted RBP	9.58	□□□□□ -0.88
LGR4-206	ENST00000530658	GABBR2	O75899	941 aa		9.57	□□□□□ -0.88
LGR4-206	ENST00000530658	DCAF8L2	P0C7V8	631 aa		9.57	□□□□□ -0.88
LGR4-206	ENST00000530658	NUBP1	P53384	320 aa		9.57	□□□□□ -0.88
LGR4-206	ENST00000530658	RASEF	Q8IZ41	740 aa		9.54	□□□□□ -0.88
LGR4-206	ENST00000530658	RGL2	O15211	777 aa		9.53	□□□□□ -0.88
LGR4-206	ENST00000530658	TSPYL2	Q9H2G4	693 aa	Predicted RBP	9.52	□□□□□ -0.89
LGR4-206	ENST00000530658	GSE1	Q14687	1217 aa		9.51	□□□□□ -0.89
LGR4-206	ENST00000530658	CCDC61	Q9Y6R9	512 aa		9.51	□□□□□ -0.89
LGR4-206	ENST00000530658	PHF12	Q96QT6	1004 aa		9.5	□□□□□ -0.89
LGR4-206	ENST00000530658	TRIM41	Q8WV44	630 aa		9.49	□□□□□ -0.89
LGR4-206	ENST00000530658	FAM212A	Q96EL1	285 aa		9.48	□□□□□ -0.89
LGR4-206	ENST00000530658	DCAF8	Q5TAQ9	597 aa		9.47	□□□□□ -0.89
LGR4-206	ENST00000530658	GALR2	O43603	387 aa	Predicted RBP	9.43	□□□□□ -0.9
LGR4-206	ENST00000530658	PLCB2	Q00722	1185 aa		9.42	□□□□□ -0.9
LGR4-206	ENST00000530658	RNF25	Q96BH1	459 aa	Predicted RBP	9.42	□□□□□ -0.9
LGR4-206	ENST00000530658	KIF12	Q96FN5	646 aa		9.42	□□□□□ -0.9
LGR4-206	ENST00000530658	MS4A3	Q96HJ5	214 aa		9.4	□□□□□ -0.9
LGR4-206	ENST00000530658	DCBLD2	Q96PD2	775 aa		9.38	□□□□□ -0.91
LGR4-206	ENST00000530658	SGIP1	Q9BQI5	828 aa		9.38	□□□□□ -0.91
LGR4-206	ENST00000530658	POTEI	P0CG38	1075 aa		9.37	□□□□□ -0.91
LGR4-206	ENST00000530658	BBX	Q8WY36	941 aa	Predicted RBP	9.37	□□□□□ -0.91
LGR4-206	ENST00000530658	MAP3K13	O43283	966 aa		9.36	□□□□□ -0.91
LGR4-206	ENST00000530658	CHRM1	P11229	460 aa	Predicted RBP	9.36	□□□□□ -0.91
LGR4-206	ENST00000530658	CHGA	P10645	457 aa	Known RBP	9.35	□□□□□ -0.91
LGR4-206	ENST00000530658	RIOK3	O14730	519 aa	Known RBP	9.34	□□□□□ -0.91
LGR4-206	ENST00000530658	PYGB	P11216	843 aa		9.33	□□□□□ -0.92
LGR4-206	ENST00000530658	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	9.32	□□□□□ -0.92
LGR4-206	ENST00000530658	PCDHB13	Q9Y5F0	798 aa		9.32	□□□□□ -0.92
LGR4-206	ENST00000530658	HS6ST3	Q8IZP7	471 aa		9.31	□□□□□ -0.92
LGR4-206	ENST00000530658	ASTL	Q6HA08	431 aa	Predicted RBP	9.3	□□□□□ -0.92
LGR4-206	ENST00000530658	TIE1	P35590	1138 aa		9.29	□□□□□ -0.92
LGR4-206	ENST00000530658	VGF	O15240	615 aa	Predicted RBP	9.28	□□□□□ -0.92
LGR4-206	ENST00000530658	IFNL1	Q8IU54	200 aa		9.28	□□□□□ -0.92
LGR4-206	ENST00000530658	TAOK2	Q9UL54	1235 aa		9.28	□□□□□ -0.92
LGR4-206	ENST00000530658	ATMIN	O43313	823 aa	Predicted RBP	9.27	□□□□□ -0.93
LGR4-206	ENST00000530658	HAP1	P54257	671 aa	Predicted RBP	9.27	□□□□□ -0.93
LGR4-206	ENST00000530658	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	9.27	□□□□□ -0.93
LGR4-206	ENST00000530658	TRPC6	Q9Y210	931 aa		9.26	□□□□□ -0.93
LGR4-206	ENST00000530658	DNAJC5	Q9H3Z4	198 aa		9.25	□□□□□ -0.93
LGR4-206	ENST00000530658	BMP2K	Q9NSY1	1161 aa	Predicted RBP	9.25	□□□□□ -0.93
LGR4-206	ENST00000530658	CFAP44	Q96MT7	982 aa		9.24	□□□□□ -0.93
LGR4-206	ENST00000530658	STK25	O00506	426 aa		9.23	□□□□□ -0.93
LGR4-206	ENST00000530658	ZNF467	Q7Z7K2	595 aa	Predicted RBP	9.23	□□□□□ -0.93
LGR4-206	ENST00000530658	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	9.22	□□□□□ -0.93
LGR4-206	ENST00000530658	PELP1	Q8IZL8	1130 aa	Known RBP	9.22	□□□□□ -0.93
LGR4-206	ENST00000530658	SPRYD3	Q8NCJ5	442 aa		9.22	□□□□□ -0.93
LGR4-206	ENST00000530658	ZFP91	Q96JP5	570 aa	Predicted RBP	9.22	□□□□□ -0.93
LGR4-206	ENST00000530658	TTLL13P	A6NNM8	815 aa		9.21	□□□□□ -0.94
LGR4-206	ENST00000530658	ATN1	P54259	1190 aa	Predicted RBP	9.21	□□□□□ -0.94
LGR4-206	ENST00000530658	NKX1-1	Q15270	411 aa	Predicted RBP	9.19	□□□□□ -0.94
LGR4-206	ENST00000530658	SLC39A7	Q92504	469 aa		9.19	□□□□□ -0.94
LGR4-206	ENST00000530658	BCL11B	Q9C0K0	894 aa	Predicted RBP	9.19	□□□□□ -0.94
LGR4-206	ENST00000530658	PCDHB8	Q9UN66	801 aa		9.19	□□□□□ -0.94
LGR4-206	ENST00000530658	C7	P10643	843 aa		9.18	□□□□□ -0.94
LGR4-206	ENST00000530658	STK24	Q9Y6E0	443 aa		9.17	□□□□□ -0.94
LGR4-206	ENST00000530658	LHX8	Q68G74	356 aa		9.16	□□□□□ -0.94
LGR4-206	ENST00000530658	TMEM106C	Q9BVX2	250 aa		9.16	□□□□□ -0.94
LGR4-206	ENST00000530658	METRN	Q9UJH8	293 aa		9.16	□□□□□ -0.94
LGR4-206	ENST00000530658	PDAP1	Q13442	181 aa	Known RBP	9.15	□□□□□ -0.94
LGR4-206	ENST00000530658	TRIM35	Q9UPQ4	493 aa		9.14	□□□□□ -0.95
LGR4-206	ENST00000530658	IER5L	Q5T953	404 aa		9.13	□□□□□ -0.95
LGR4-206	ENST00000530658	VSIG10	Q8N0Z9	540 aa		9.13	□□□□□ -0.95
LGR4-206	ENST00000530658	GTPBP6	O43824	516 aa	Predicted RBP	9.12	□□□□□ -0.95
LGR4-206	ENST00000530658	PSEN1	P49768	467 aa		9.11	□□□□□ -0.95
LGR4-206	ENST00000530658	TSHZ2	Q9NRE2	1034 aa		9.11	□□□□□ -0.95
LGR4-206	ENST00000530658	KDM2A	Q9Y2K7	1162 aa		9.08	□□□□□ -0.96
LGR4-206	ENST00000530658	POTEF	A5A3E0	1075 aa		9.06	□□□□□ -0.96
LGR4-206	ENST00000530658	POTEB2	H3BUK9	544 aa		9.05	□□□□□ -0.96
LGR4-206	ENST00000530658	SEC24B	O95487	1268 aa		9.04	□□□□□ -0.96
LGR4-206	ENST00000530658	RYDEN	Q9NUL5	291 aa	Known RBP	9.04	□□□□□ -0.96
LGR4-206	ENST00000530658	COLQ	Q9Y215	455 aa	Predicted RBP	9.04	□□□□□ -0.96
LGR4-206	ENST00000530658	IRX5	P78411	483 aa	Predicted RBP	9.03	□□□□□ -0.96
LGR4-206	ENST00000530658	GOLGA2	Q08379	1002 aa		9.02	□□□□□ -0.97
LGR4-206	ENST00000530658	PLCG2	P16885	1265 aa		9	□□□□□ -0.97
LGR4-206	ENST00000530658	MKRN3	Q13064	507 aa	Known RBP	9	□□□□□ -0.97
LGR4-206	ENST00000530658	MFRP	Q9BY79	579 aa		9	□□□□□ -0.97
LGR4-206	ENST00000530658	CABP2	Q9NPB3	220 aa		9	□□□□□ -0.97
LGR4-206	ENST00000530658	MAMSTR	Q6ZN01	415 aa		8.99	□□□□□ -0.97
LGR4-206	ENST00000530658	EFCAB3	Q8N7B9	438 aa		8.99	□□□□□ -0.97
LGR4-206	ENST00000530658	OCEL1	Q9H607	264 aa		8.99	□□□□□ -0.97
LGR4-206	ENST00000530658	POTEJ	P0CG39	1038 aa		8.98	□□□□□ -0.97
LGR4-206	ENST00000530658	OTUD5	Q96G74	571 aa		8.97	□□□□□ -0.97
LGR4-206	ENST00000530658	ILDR1	Q86SU0	546 aa	Predicted RBP	8.96	□□□□□ -0.98
LGR4-206	ENST00000530658	PDCD7	Q8N8D1	485 aa	Known RBP	8.95	□□□□□ -0.98
LGR4-206	ENST00000530658	SOX12	O15370	315 aa		8.94	□□□□□ -0.98
LGR4-206	ENST00000530658	FBXO22	Q8NEZ5	403 aa		8.94	□□□□□ -0.98
LGR4-206	ENST00000530658	SCUBE2	Q9NQ36	999 aa		8.93	□□□□□ -0.98
LGR4-206	ENST00000530658	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	8.93	□□□□□ -0.98	4e-7	■■□□□ 12.2
LGR4-206	ENST00000530658	PHF8	Q9UPP1	1060 aa		8.93	□□□□□ -0.98
LGR4-206	ENST00000530658	NLRP6	P59044	892 aa		8.92	□□□□□ -0.98
LGR4-206	ENST00000530658	BCAN	Q96GW7	911 aa		8.91	□□□□□ -0.98
LGR4-206	ENST00000530658	PPP1R37	O75864	691 aa		8.89	□□□□□ -0.99
LGR4-206	ENST00000530658	L3MBTL3	Q96JM7	780 aa	Predicted RBP	8.88	□□□□□ -0.99
LGR4-206	ENST00000530658	CADPS2	Q86UW7	1296 aa		8.87	□□□□□ -0.99
LGR4-206	ENST00000530658	MS4A4A	Q96JQ5	239 aa		8.87	□□□□□ -0.99
LGR4-206	ENST00000530658	DPY19L2	Q6NUT2	758 aa		8.82	□□□□□ -1
LGR4-206	ENST00000530658	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	8.81	□□□□□ -1

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