RNA–Protein interactions for RNA: ENST00000530566.1

POLB-216, Transcript of DNA polymerase beta, humanhuman

TSL 4

Gene POLB, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLB-216ENST00000530566 RIMBP3CA6NJZ7 1639 aa15.86■□□□□ 0.13
POLB-216ENST00000530566 RIMBP3BA6NNM3 1639 aa15.86■□□□□ 0.13
POLB-216ENST00000530566 RIMBP3Q9UFD9 1639 aa15.86■□□□□ 0.13
POLB-216ENST00000530566 KIF21AQ7Z4S6 1674 aa15.86■□□□□ 0.13
POLB-216ENST00000530566 LAMC3Q9Y6N6 1575 aa15.85■□□□□ 0.13
POLB-216ENST00000530566 C19orf67A6NJJ6 358 aa15.85■□□□□ 0.13
POLB-216ENST00000530566 ATAD2BQ9ULI0 1458 aa15.84■□□□□ 0.13
POLB-216ENST00000530566 PDS5BQ9NTI5 1447 aa15.83■□□□□ 0.12
POLB-216ENST00000530566 EVX2Q03828 476 aa15.81■□□□□ 0.12
POLB-216ENST00000530566 HMGXB3Q12766 1538 aa15.81■□□□□ 0.12
POLB-216ENST00000530566 FARP1Q9Y4F1 1045 aaPredicted RBP15.79■□□□□ 0.12
POLB-216ENST00000530566 MRC2Q9UBG0 1479 aa15.73■□□□□ 0.11
POLB-216ENST00000530566 CYB5RLQ6IPT4 315 aa15.72■□□□□ 0.11
POLB-216ENST00000530566 ARHGEF11O15085 1522 aa15.7■□□□□ 0.1
POLB-216ENST00000530566 WDR62O43379 1518 aa15.7■□□□□ 0.1
POLB-216ENST00000530566 ILDR1Q86SU0 546 aaPredicted RBP15.69■□□□□ 0.1
POLB-216ENST00000530566 CREBZFQ9NS37 354 aa15.68■□□□□ 0.1
POLB-216ENST00000530566 BAZ1BQ9UIG0 1483 aaKnown RBP15.66■□□□□ 0.1
POLB-216ENST00000530566 CD44P16070 742 aaKnown RBP15.66■□□□□ 0.1
POLB-216ENST00000530566 PROM2Q8N271 834 aa15.65■□□□□ 0.1
POLB-216ENST00000530566 GABBR2O75899 941 aa15.57■□□□□ 0.08
POLB-216ENST00000530566 SMARCA4P51532 1647 aa15.55■□□□□ 0.08
POLB-216ENST00000530566 CLCN6P51797 869 aa15.55■□□□□ 0.08
POLB-216ENST00000530566 NPM1P06748 294 aaKnown RBP eCLIP15.54■□□□□ 0.08
POLB-216ENST00000530566 CADPSQ9ULU8 1353 aa15.52■□□□□ 0.08
POLB-216ENST00000530566 PAK3O75914 559 aaPredicted RBP15.48■□□□□ 0.07
POLB-216ENST00000530566 ARAP1Q96P48 1450 aa15.47■□□□□ 0.07
POLB-216ENST00000530566 CEP164Q9UPV0 1460 aa15.47■□□□□ 0.07
POLB-216ENST00000530566 ZRANB1Q9UGI0 708 aa15.46■□□□□ 0.07
POLB-216ENST00000530566 PLEKHG5O94827 1062 aa15.43■□□□□ 0.06
POLB-216ENST00000530566 ZNF579Q8NAF0 562 aaKnown RBP15.42■□□□□ 0.06
POLB-216ENST00000530566 MNX1P50219 401 aaPredicted RBP15.41■□□□□ 0.06
POLB-216ENST00000530566 FKBP8Q14318 412 aa15.41■□□□□ 0.06
POLB-216ENST00000530566 PEG3Q9GZU2 1588 aa15.39■□□□□ 0.05
POLB-216ENST00000530566 FANCD2Q9BXW9 1451 aa15.35■□□□□ 0.05
POLB-216ENST00000530566 MIER1Q8N108 512 aa15.34■□□□□ 0.05
POLB-216ENST00000530566 RSF1Q96T23 1441 aaPredicted RBP15.29■□□□□ 0.04
POLB-216ENST00000530566 DCBLD2Q96PD2 775 aa15.27■□□□□ 0.04
POLB-216ENST00000530566 URB2Q14146 1524 aaKnown RBP15.27■□□□□ 0.03
POLB-216ENST00000530566 ZNF608Q9ULD9 1512 aaPredicted RBP15.26■□□□□ 0.03
POLB-216ENST00000530566 PLCD3Q8N3E9 789 aa15.25■□□□□ 0.03
POLB-216ENST00000530566 ZBTB47Q9UFB7 747 aaPredicted RBP15.21■□□□□ 0.03
POLB-216ENST00000530566 PHF12Q96QT6 1004 aa15.2■□□□□ 0.02
POLB-216ENST00000530566 IFT140Q96RY7 1462 aa15.19■□□□□ 0.02
POLB-216ENST00000530566 CHD1O14646 1710 aa15.18■□□□□ 0.02
POLB-216ENST00000530566 GALR2O43603 387 aaPredicted RBP15.17■□□□□ 0.02
POLB-216ENST00000530566 FBXO3Q9UK99 471 aa15.17■□□□□ 0.02
POLB-216ENST00000530566 POTEIP0CG38 1075 aa15.16■□□□□ 0.02
POLB-216ENST00000530566 TSPYL2Q9H2G4 693 aaPredicted RBP15.16■□□□□ 0.02
POLB-216ENST00000530566 MROH2BQ7Z745 1585 aa15.14■□□□□ 0.01
POLB-216ENST00000530566 EIF4G3O43432 1585 aaKnown RBP15.11■□□□□ 0.01
POLB-216ENST00000530566 CFTRP13569 1480 aa15.11■□□□□ 0.01
POLB-216ENST00000530566 LHX8Q68G74 356 aa15.1■□□□□ 0.01
POLB-216ENST00000530566 CCDC61Q9Y6R9 512 aa15.07■□□□□ 0
POLB-216ENST00000530566 KDM4FA0A1W2PPD8 638 aa15.06■□□□□ 0
POLB-216ENST00000530566 RASEFQ8IZ41 740 aa15.03■□□□□ -0
POLB-216ENST00000530566 MS4A3Q96HJ5 214 aa15.02■□□□□ -0
POLB-216ENST00000530566 AQRO60306 1485 aaKnown RBP eCLIP15.01□□□□□ -0.01
POLB-216ENST00000530566 CLASP1Q7Z460 1538 aa14.98□□□□□ -0.01
POLB-216ENST00000530566 KIF12Q96FN5 646 aa14.97□□□□□ -0.01
POLB-216ENST00000530566 GAPVD1Q14C86 1478 aa14.95□□□□□ -0.02
POLB-216ENST00000530566 NUBP1P53384 320 aa14.94□□□□□ -0.02
POLB-216ENST00000530566 FAM212AQ96EL1 285 aa14.94□□□□□ -0.02
POLB-216ENST00000530566 FBXO41Q8TF61 875 aa14.93□□□□□ -0.02
POLB-216ENST00000530566 TOPBP1Q92547 1522 aa14.92□□□□□ -0.02
POLB-216ENST00000530566 SYNJ1O43426 1573 aa14.92□□□□□ -0.02
POLB-216ENST00000530566 WIZO95785 1651 aa14.9□□□□□ -0.02
POLB-216ENST00000530566 ASTLQ6HA08 431 aaPredicted RBP14.9□□□□□ -0.02
POLB-216ENST00000530566 ERCC6L2Q5T890 1561 aa14.9□□□□□ -0.02
POLB-216ENST00000530566 CHMP7Q8WUX9 453 aaPredicted RBP14.89□□□□□ -0.03
POLB-216ENST00000530566 MAP3K13O43283 966 aa14.88□□□□□ -0.03
POLB-216ENST00000530566 VASPP50552 380 aaPredicted RBP14.87□□□□□ -0.03
POLB-216ENST00000530566 ATMINO43313 823 aaPredicted RBP14.86□□□□□ -0.03
POLB-216ENST00000530566 SGIP1Q9BQI5 828 aa14.86□□□□□ -0.03
POLB-216ENST00000530566 LMTK3Q96Q04 1460 aa14.86□□□□□ -0.03
POLB-216ENST00000530566 ABCC8Q09428 1581 aa14.85□□□□□ -0.03
POLB-216ENST00000530566 TARBP1Q13395 1621 aaKnown RBP14.85□□□□□ -0.03
POLB-216ENST00000530566 KLHL34Q8N239 644 aa14.84□□□□□ -0.03
POLB-216ENST00000530566 SLC39A7Q92504 469 aa14.84□□□□□ -0.03
POLB-216ENST00000530566 KIF13AQ9H1H9 1805 aa14.82□□□□□ -0.04
POLB-216ENST00000530566 C7P10643 843 aa14.82□□□□□ -0.04
POLB-216ENST00000530566 PRDM2Q13029 1718 aa14.82□□□□□ -0.04
POLB-216ENST00000530566 SNAPC4Q5SXM2 1469 aa14.82□□□□□ -0.04
POLB-216ENST00000530566 HECW2Q9P2P5 1572 aa14.81□□□□□ -0.04
POLB-216ENST00000530566 PELP1Q8IZL8 1130 aaKnown RBP14.81□□□□□ -0.04
POLB-216ENST00000530566 TIE1P35590 1138 aa14.8□□□□□ -0.04
POLB-216ENST00000530566 PCDHB13Q9Y5F0 798 aa14.8□□□□□ -0.04
POLB-216ENST00000530566 DCAF8Q5TAQ9 597 aa14.79□□□□□ -0.04
POLB-216ENST00000530566 METRNQ9UJH8 293 aa14.78□□□□□ -0.04
POLB-216ENST00000530566 DNMBPQ6XZF7 1577 aa14.77□□□□□ -0.04
POLB-216ENST00000530566 TDRD9Q8NDG6 1382 aaKnown RBP14.77□□□□□ -0.04
POLB-216ENST00000530566 SOCS7O14512 581 aa14.77□□□□□ -0.05
POLB-216ENST00000530566 KDM6BO15054 1643 aa14.75□□□□□ -0.05
POLB-216ENST00000530566 ATN1P54259 1190 aaPredicted RBP14.75□□□□□ -0.05
POLB-216ENST00000530566 FAM69CQ0P6D2 419 aa14.75□□□□□ -0.05
POLB-216ENST00000530566 BMP2KQ9NSY1 1161 aaPredicted RBP14.75□□□□□ -0.05
POLB-216ENST00000530566 MAGI1Q96QZ7 1491 aaPredicted RBP14.73□□□□□ -0.05
POLB-216ENST00000530566 GSE1Q14687 1217 aa14.71□□□□□ -0.05
POLB-216ENST00000530566 TRPC6Q9Y210 931 aa14.71□□□□□ -0.05
POLB-216ENST00000530566 SYNJ2O15056 1496 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms