RNA–Protein interactions for RNA: ENST00000530388.1

ARHGEF12-209, Transcript of Rho guanine nucleotide exchange factor 12, humanhuman

TSL 1 (best)

Gene ARHGEF12, Length 4,309 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF12-209ENST00000530388 HSP90B1P14625 803 aaKnown RBP6.05□□□□□ -1.44
ARHGEF12-209ENST00000530388 NEUROD2Q15784 382 aa6.03□□□□□ -1.44
ARHGEF12-209ENST00000530388 SPOCK2Q92563 424 aa6.03□□□□□ -1.44
ARHGEF12-209ENST00000530388 RSPH6AQ9H0K4 717 aa6.02□□□□□ -1.45
ARHGEF12-209ENST00000530388 GTPBP6O43824 516 aaPredicted RBP6.02□□□□□ -1.45
ARHGEF12-209ENST00000530388 LOC105371045A0A1W2PR82 267 aa6.01□□□□□ -1.45
ARHGEF12-209ENST00000530388 MYT1LQ9UL68 1186 aa6□□□□□ -1.45
ARHGEF12-209ENST00000530388 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.99□□□□□ -1.45
ARHGEF12-209ENST00000530388 NECTIN2Q92692 538 aa5.98□□□□□ -1.45
ARHGEF12-209ENST00000530388 MSH5O43196 834 aa5.98□□□□□ -1.45
ARHGEF12-209ENST00000530388 LMOD2Q6P5Q4 547 aa5.97□□□□□ -1.45
ARHGEF12-209ENST00000530388 KCNV2Q8TDN2 545 aa5.96□□□□□ -1.45
ARHGEF12-209ENST00000530388 TRIM41Q8WV44 630 aa5.96□□□□□ -1.45
ARHGEF12-209ENST00000530388 ARID3CA6NKF2 412 aa5.96□□□□□ -1.46
ARHGEF12-209ENST00000530388 HS6ST3Q8IZP7 471 aa5.96□□□□□ -1.46
ARHGEF12-209ENST00000530388 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.95□□□□□ -1.46
ARHGEF12-209ENST00000530388 SLC24A3Q9HC58 644 aa5.95□□□□□ -1.46
ARHGEF12-209ENST00000530388 CADPS2Q86UW7 1296 aa5.95□□□□□ -1.46
ARHGEF12-209ENST00000530388 ZMYND15Q9H091 742 aa5.95□□□□□ -1.46
ARHGEF12-209ENST00000530388 SAMD1Q6SPF0 538 aaPredicted RBP5.94□□□□□ -1.46
ARHGEF12-209ENST00000530388 RAD21O60216 631 aa5.93□□□□□ -1.46
ARHGEF12-209ENST00000530388 FAM9AQ8IZU1 332 aaPredicted RBP5.93□□□□□ -1.46
ARHGEF12-209ENST00000530388 KCTD17Q8N5Z5 321 aa5.93□□□□□ -1.46
ARHGEF12-209ENST00000530388 CIZ1Q9ULV3 898 aaPredicted RBP5.93□□□□□ -1.46
ARHGEF12-209ENST00000530388 DCAF8L1A6NGE4 600 aa5.93□□□□□ -1.46
ARHGEF12-209ENST00000530388 PLEKHG5O94827 1062 aa5.92□□□□□ -1.46
ARHGEF12-209ENST00000530388 CHMP4AQ9BY43 222 aa5.91□□□□□ -1.46
ARHGEF12-209ENST00000530388 GPBP1L1Q9HC44 474 aaPredicted RBP5.91□□□□□ -1.46
ARHGEF12-209ENST00000530388 ZC3H15Q8WU90 426 aaKnown RBP5.9□□□□□ -1.46
ARHGEF12-209ENST00000530388 USP35Q9P2H5 1018 aa5.89□□□□□ -1.47
ARHGEF12-209ENST00000530388 RBM25P49756 843 aaKnown RBP5.89□□□□□ -1.47
ARHGEF12-209ENST00000530388 AEBP1Q8IUX7 1158 aa5.88□□□□□ -1.47
ARHGEF12-209ENST00000530388 SPINK5Q9NQ38 1064 aaPredicted RBP5.88□□□□□ -1.47
ARHGEF12-209ENST00000530388 APBB1O00213 710 aa5.87□□□□□ -1.47
ARHGEF12-209ENST00000530388 ZNF428Q96B54 188 aa5.86□□□□□ -1.47
ARHGEF12-209ENST00000530388 POLA2Q14181 598 aa5.86□□□□□ -1.47
ARHGEF12-209ENST00000530388 IGSF3O75054 1194 aa5.86□□□□□ -1.47
ARHGEF12-209ENST00000530388 BRD2P25440 801 aaKnown RBP5.85□□□□□ -1.47
ARHGEF12-209ENST00000530388 PLCD3Q8N3E9 789 aa5.85□□□□□ -1.47
ARHGEF12-209ENST00000530388 TMCO4Q5TGY1 634 aa5.84□□□□□ -1.47
ARHGEF12-209ENST00000530388 P3H3Q8IVL6 736 aa5.84□□□□□ -1.47
ARHGEF12-209ENST00000530388 PUS7Q96PZ0 661 aaKnown RBP5.83□□□□□ -1.48
ARHGEF12-209ENST00000530388 SEMA3EO15041 775 aa5.83□□□□□ -1.48
ARHGEF12-209ENST00000530388 WDR70Q9NW82 654 aa5.83□□□□□ -1.48
ARHGEF12-209ENST00000530388 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.82□□□□□ -1.48
ARHGEF12-209ENST00000530388 MKRN3Q13064 507 aaKnown RBP5.82□□□□□ -1.48
ARHGEF12-209ENST00000530388 HNRNPUL2Q1KMD3 747 aaKnown RBP5.82□□□□□ -1.48
ARHGEF12-209ENST00000530388 IL27Q8NEV9 243 aa5.82□□□□□ -1.48
ARHGEF12-209ENST00000530388 MIER1Q8N108 512 aa5.81□□□□□ -1.48
ARHGEF12-209ENST00000530388 NEFLP07196 543 aa5.8□□□□□ -1.48
ARHGEF12-209ENST00000530388 E9PSI1 815 aa5.8□□□□□ -1.48
ARHGEF12-209ENST00000530388 ARID4BQ4LE39 1312 aaPredicted RBP5.8□□□□□ -1.48
ARHGEF12-209ENST00000530388 STK25O00506 426 aa5.79□□□□□ -1.48
ARHGEF12-209ENST00000530388 UBE2Q2Q8WVN8 375 aa5.78□□□□□ -1.48
ARHGEF12-209ENST00000530388 PPM1GO15355 546 aaPredicted RBP5.77□□□□□ -1.49
ARHGEF12-209ENST00000530388 DHX37Q8IY37 1157 aaKnown RBP5.76□□□□□ -1.49
ARHGEF12-209ENST00000530388 MTMR7Q9Y216 660 aa5.76□□□□□ -1.49
ARHGEF12-209ENST00000530388 ZMYND10O75800 440 aa5.76□□□□□ -1.49
ARHGEF12-209ENST00000530388 PDE4CQ08493 712 aa5.76□□□□□ -1.49
ARHGEF12-209ENST00000530388 FOXD4L5Q5VV16 416 aaPredicted RBP5.75□□□□□ -1.49
ARHGEF12-209ENST00000530388 FOXD4L4Q8WXT5 416 aaPredicted RBP5.75□□□□□ -1.49
ARHGEF12-209ENST00000530388 FBXW7Q969H0 707 aa5.75□□□□□ -1.49
ARHGEF12-209ENST00000530388 BCL11BQ9C0K0 894 aaPredicted RBP5.74□□□□□ -1.49
ARHGEF12-209ENST00000530388 TAF7LQ5H9L4 462 aa5.74□□□□□ -1.49
ARHGEF12-209ENST00000530388 GZF1Q9H116 711 aaPredicted RBP5.73□□□□□ -1.49
ARHGEF12-209ENST00000530388 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5.73□□□□□ -1.49
ARHGEF12-209ENST00000530388 RIOK3O14730 519 aaKnown RBP5.73□□□□□ -1.49
ARHGEF12-209ENST00000530388 MFAP1P55081 439 aaKnown RBP5.73□□□□□ -1.49
ARHGEF12-209ENST00000530388 ZFP91Q96JP5 570 aaPredicted RBP5.73□□□□□ -1.49
ARHGEF12-209ENST00000530388 CCDC82Q8N4S0 544 aa5.72□□□□□ -1.49
ARHGEF12-209ENST00000530388 ABCB7O75027 752 aa5.71□□□□□ -1.49
ARHGEF12-209ENST00000530388 CLUAP1Q96AJ1 413 aa5.71□□□□□ -1.5
ARHGEF12-209ENST00000530388 NUBP1P53384 320 aa5.71□□□□□ -1.5
ARHGEF12-209ENST00000530388 CCDC97Q96F63 343 aaPredicted RBP5.71□□□□□ -1.5
ARHGEF12-209ENST00000530388 PABPN1Q86U42 306 aaKnown RBP eCLIP5.7□□□□□ -1.5
ARHGEF12-209ENST00000530388 OSCARQ8IYS5 282 aa5.7□□□□□ -1.5
ARHGEF12-209ENST00000530388 STK24Q9Y6E0 443 aa5.7□□□□□ -1.5
ARHGEF12-209ENST00000530388 TESPA1A2RU30 521 aaPredicted RBP5.7□□□□□ -1.5
ARHGEF12-209ENST00000530388 KDM4CQ9H3R0 1056 aa5.7□□□□□ -1.5
ARHGEF12-209ENST00000530388 FAM117AQ9C073 453 aa5.7□□□□□ -1.5
ARHGEF12-209ENST00000530388 PSMD1Q99460 953 aa5.69□□□□□ -1.5
ARHGEF12-209ENST00000530388 ZNF692Q9BU19 519 aaPredicted RBP5.68□□□□□ -1.5
ARHGEF12-209ENST00000530388 RSPH4AQ5TD94 716 aa5.68□□□□□ -1.5
ARHGEF12-209ENST00000530388 PPP1R37O75864 691 aa5.68□□□□□ -1.5
ARHGEF12-209ENST00000530388 KRI1Q8N9T8 703 aaKnown RBP5.68□□□□□ -1.5
ARHGEF12-209ENST00000530388 ZNF326Q5BKZ1 582 aaKnown RBP5.67□□□□□ -1.5
ARHGEF12-209ENST00000530388 RGS22Q8NE09 1264 aa5.67□□□□□ -1.5
ARHGEF12-209ENST00000530388 PLEKHG3A1L390 1219 aa5.67□□□□□ -1.5
ARHGEF12-209ENST00000530388 RBM26Q5T8P6 1007 aaKnown RBP5.67□□□□□ -1.5
ARHGEF12-209ENST00000530388 ONECUT3O60422 494 aaPredicted RBP5.66□□□□□ -1.5
ARHGEF12-209ENST00000530388 SSUH2Q9Y2M2 353 aa5.66□□□□□ -1.5
ARHGEF12-209ENST00000530388 ATP1B4Q9UN42 357 aaPredicted RBP5.65□□□□□ -1.5
ARHGEF12-209ENST00000530388 STAG3Q9UJ98 1225 aa5.65□□□□□ -1.5
ARHGEF12-209ENST00000530388 FLIIQ13045 1269 aa5.65□□□□□ -1.51
ARHGEF12-209ENST00000530388 ZNF526Q8TF50 670 aaPredicted RBP5.64□□□□□ -1.51
ARHGEF12-209ENST00000530388 RYDENQ9NUL5 291 aaKnown RBP5.64□□□□□ -1.51
ARHGEF12-209ENST00000530388 BCCIPQ9P287 314 aaKnown RBP eCLIP5.64□□□□□ -1.51
ARHGEF12-209ENST00000530388 MLLT3P42568 568 aaPredicted RBP5.63□□□□□ -1.51
ARHGEF12-209ENST00000530388 BARGINQ6ZT62 677 aa5.63□□□□□ -1.51
ARHGEF12-209ENST00000530388 TRAIPQ9BWF2 469 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms