RNA–Protein interactions for RNA: ENST00000530279.5

C11orf54-208, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 4

Gene C11orf54, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-208ENST00000530279 ASTLQ6HA08 431 aaPredicted RBP12.53□□□□□ -0.4
C11orf54-208ENST00000530279 LCE2DQ5TA82 110 aaPredicted RBP12.52□□□□□ -0.41
C11orf54-208ENST00000530279 ATMINO43313 823 aaPredicted RBP12.49□□□□□ -0.41
C11orf54-208ENST00000530279 NPM1P06748 294 aaKnown RBP eCLIP12.49□□□□□ -0.41
C11orf54-208ENST00000530279 SCUBE2Q9NQ36 999 aa12.46□□□□□ -0.41
C11orf54-208ENST00000530279 MS4A3Q96HJ5 214 aa12.45□□□□□ -0.42
C11orf54-208ENST00000530279 MNX1P50219 401 aaPredicted RBP12.37□□□□□ -0.43
C11orf54-208ENST00000530279 ATN1P54259 1190 aaPredicted RBP12.32□□□□□ -0.44
C11orf54-208ENST00000530279 CDAN1Q8IWY9 1227 aa12.32□□□□□ -0.44
C11orf54-208ENST00000530279 POTEFA5A3E0 1075 aa12.26□□□□□ -0.45
C11orf54-208ENST00000530279 SPDYE4A6NLX3 237 aa12.23□□□□□ -0.45
C11orf54-208ENST00000530279 TSPYL2Q9H2G4 693 aaPredicted RBP12.22□□□□□ -0.45
C11orf54-208ENST00000530279 BMP2KQ9NSY1 1161 aaPredicted RBP12.19□□□□□ -0.46
C11orf54-208ENST00000530279 CCDC61Q9Y6R9 512 aa12.18□□□□□ -0.46
C11orf54-208ENST00000530279 KIF12Q96FN5 646 aa12.16□□□□□ -0.46
C11orf54-208ENST00000530279 SEC24BO95487 1268 aa12.13□□□□□ -0.47
C11orf54-208ENST00000530279 TIE1P35590 1138 aa12.12□□□□□ -0.47
C11orf54-208ENST00000530279 TRPC6Q9Y210 931 aa12.12□□□□□ -0.47
C11orf54-208ENST00000530279 COLQQ9Y215 455 aaPredicted RBP12.11□□□□□ -0.47
C11orf54-208ENST00000530279 ST18O60284 1047 aa12.08□□□□□ -0.48
C11orf54-208ENST00000530279 MMRN1Q13201 1228 aa12.07□□□□□ -0.48
C11orf54-208ENST00000530279 MAP3K13O43283 966 aa12.05□□□□□ -0.48
C11orf54-208ENST00000530279 SLAIN1Q8ND83 568 aa12.04□□□□□ -0.48
C11orf54-208ENST00000530279 SPNS2Q8IVW8 549 aa12.03□□□□□ -0.48
C11orf54-208ENST00000530279 TTLL13PA6NNM8 815 aa12.02□□□□□ -0.49
C11orf54-208ENST00000530279 IER5LQ5T953 404 aa12□□□□□ -0.49
C11orf54-208ENST00000530279 TRIM35Q9UPQ4 493 aa11.96□□□□□ -0.49
C11orf54-208ENST00000530279 TMEM121BQ9BXQ6 578 aaPredicted RBP11.91□□□□□ -0.5
C11orf54-208ENST00000530279 CSRNP3Q8WYN3 585 aa11.89□□□□□ -0.51
C11orf54-208ENST00000530279 RASEFQ8IZ41 740 aa11.88□□□□□ -0.51
C11orf54-208ENST00000530279 SGIP1Q9BQI5 828 aa11.87□□□□□ -0.51
C11orf54-208ENST00000530279 PLEKHG5O94827 1062 aa11.86□□□□□ -0.51
C11orf54-208ENST00000530279 PLCG2P16885 1265 aa11.84□□□□□ -0.51
C11orf54-208ENST00000530279 PCDHB13Q9Y5F0 798 aa11.84□□□□□ -0.51
C11orf54-208ENST00000530279 SNPHO15079 494 aa11.83□□□□□ -0.52
C11orf54-208ENST00000530279 MARVELD3Q96A59 401 aa11.8□□□□□ -0.52
C11orf54-208ENST00000530279 MIER1Q8N108 512 aa11.79□□□□□ -0.52
C11orf54-208ENST00000530279 PROM2Q8N271 834 aa11.78□□□□□ -0.52
C11orf54-208ENST00000530279 TMEM106CQ9BVX2 250 aa11.76□□□□□ -0.53
C11orf54-208ENST00000530279 IRX5P78411 483 aaPredicted RBP11.75□□□□□ -0.53
C11orf54-208ENST00000530279 IFNL1Q8IU54 200 aa11.74□□□□□ -0.53
C11orf54-208ENST00000530279 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.73□□□□□ -0.53
C11orf54-208ENST00000530279 OCEL1Q9H607 264 aa11.7□□□□□ -0.54
C11orf54-208ENST00000530279 EMP3P54852 163 aa11.66□□□□□ -0.54
C11orf54-208ENST00000530279 KRTAP3-3Q9BYR6 98 aa11.63□□□□□ -0.55
C11orf54-208ENST00000530279 KRTAP3-2Q9BYR7 98 aa11.63□□□□□ -0.55
C11orf54-208ENST00000530279 HS3ST6Q96QI5 342 aa11.6□□□□□ -0.55
C11orf54-208ENST00000530279 NUBP1P53384 320 aa11.59□□□□□ -0.55
C11orf54-208ENST00000530279 PLCD3Q8N3E9 789 aa11.59□□□□□ -0.55
C11orf54-208ENST00000530279 FAM205CA6NFA0 338 aa11.58□□□□□ -0.56
C11orf54-208ENST00000530279 POTEB3A0JP26 581 aa11.57□□□□□ -0.56
C11orf54-208ENST00000530279 POTEBQ6S5H4 581 aa11.57□□□□□ -0.56
C11orf54-208ENST00000530279 ZBTB47Q9UFB7 747 aaPredicted RBP11.57□□□□□ -0.56
C11orf54-208ENST00000530279 FAM212AQ96EL1 285 aa11.55□□□□□ -0.56
C11orf54-208ENST00000530279 C3orf67Q6ZVT6 689 aa11.53□□□□□ -0.56
C11orf54-208ENST00000530279 L3MBTL3Q96JM7 780 aaPredicted RBP11.47□□□□□ -0.57
C11orf54-208ENST00000530279 PDCD7Q8N8D1 485 aaKnown RBP11.43□□□□□ -0.58
C11orf54-208ENST00000530279 PYGBP11216 843 aa11.41□□□□□ -0.58
C11orf54-208ENST00000530279 PCDHB8Q9UN66 801 aa11.41□□□□□ -0.58
C11orf54-208ENST00000530279 RNF166Q96A37 237 aaPredicted RBP11.4□□□□□ -0.58
C11orf54-208ENST00000530279 MKRN3Q13064 507 aaKnown RBP11.37□□□□□ -0.59
C11orf54-208ENST00000530279 DCAF8Q5TAQ9 597 aa11.37□□□□□ -0.59
C11orf54-208ENST00000530279 GOLGA2Q08379 1002 aa11.36□□□□□ -0.59
C11orf54-208ENST00000530279 EHMT2Q96KQ7 1210 aa11.34□□□□□ -0.59
C11orf54-208ENST00000530279 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.31□□□□□ -0.62e-7■■■□□ 17.8
C11orf54-208ENST00000530279 MYT1LQ9UL68 1186 aa11.3□□□□□ -0.6
C11orf54-208ENST00000530279 ERBB3P21860 1342 aa11.3□□□□□ -0.6
C11orf54-208ENST00000530279 HOXB1P14653 301 aaPredicted RBP11.29□□□□□ -0.6
C11orf54-208ENST00000530279 HOXB3P14651 431 aaPredicted RBP11.28□□□□□ -0.6
C11orf54-208ENST00000530279 ZNF710Q8N1W2 664 aa11.27□□□□□ -0.61
C11orf54-208ENST00000530279 ZNF467Q7Z7K2 595 aaPredicted RBP11.24□□□□□ -0.61
C11orf54-208ENST00000530279 G3V3G9 751 aa11.21□□□□□ -0.61
C11orf54-208ENST00000530279 DOK7Q18PE1 504 aa11.21□□□□□ -0.61
C11orf54-208ENST00000530279 DPY19L2Q6NUT2 758 aa11.19□□□□□ -0.62
C11orf54-208ENST00000530279 ILDR1Q86SU0 546 aaPredicted RBP11.19□□□□□ -0.62
C11orf54-208ENST00000530279 VARS2Q5ST30 1063 aaKnown RBP11.18□□□□□ -0.62
C11orf54-208ENST00000530279 PSEN1P49768 467 aa11.16□□□□□ -0.62
C11orf54-208ENST00000530279 BOLA1Q9Y3E2 137 aa11.16□□□□□ -0.62
C11orf54-208ENST00000530279 PTGER2P43116 358 aa11.15□□□□□ -0.62
C11orf54-208ENST00000530279 RIMBP2O15034 1052 aa11.14□□□□□ -0.63
C11orf54-208ENST00000530279 ZNF687Q8N1G0 1237 aa11.14□□□□□ -0.63
C11orf54-208ENST00000530279 GSE1Q14687 1217 aa11.1□□□□□ -0.63
C11orf54-208ENST00000530279 CHRM1P11229 460 aaPredicted RBP11.08□□□□□ -0.64
C11orf54-208ENST00000530279 ZSWIM6Q9HCJ5 1215 aa11.04□□□□□ -0.64
C11orf54-208ENST00000530279 PDAP1Q13442 181 aaKnown RBP11.03□□□□□ -0.64
C11orf54-208ENST00000530279 CABP2Q9NPB3 220 aa11.03□□□□□ -0.64
C11orf54-208ENST00000530279 ANKRD13DQ6ZTN6 518 aa11.02□□□□□ -0.65
C11orf54-208ENST00000530279 GPR153Q6NV75 609 aa10.98□□□□□ -0.65
C11orf54-208ENST00000530279 PLA2G2EQ9NZK7 142 aa10.97□□□□□ -0.65
C11orf54-208ENST00000530279 KLHL34Q8N239 644 aa10.95□□□□□ -0.66
C11orf54-208ENST00000530279 LSM11P83369 360 aaKnown RBP eCLIP10.91□□□□□ -0.66
C11orf54-208ENST00000530279 FBXO3Q9UK99 471 aa10.89□□□□□ -0.67
C11orf54-208ENST00000530279 TMEM92Q6UXU6 159 aa10.88□□□□□ -0.67
C11orf54-208ENST00000530279 ARSIQ5FYB1 569 aa10.87□□□□□ -0.67
C11orf54-208ENST00000530279 ZNF316A6NFI3 1004 aaPredicted RBP10.86□□□□□ -0.67
C11orf54-208ENST00000530279 HCSTQ9UBK5 93 aa10.86□□□□□ -0.67
C11orf54-208ENST00000530279 FKBP8Q14318 412 aa10.85□□□□□ -0.67
C11orf54-208ENST00000530279 MICALL2Q8IY33 904 aa10.85□□□□□ -0.67
C11orf54-208ENST00000530279 EFCAB3Q8N7B9 438 aa10.81□□□□□ -0.68
C11orf54-208ENST00000530279 PBX2P40425 430 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms