RNA–Protein interactions for RNA: ENST00000530253.5

CCDC90B-217, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 776 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-217ENST00000530253 CCDC61Q9Y6R9 512 aa20.32■□□□□ 0.84
CCDC90B-217ENST00000530253 MS4A3Q96HJ5 214 aa20.3■□□□□ 0.84
CCDC90B-217ENST00000530253 RASEFQ8IZ41 740 aa20.21■□□□□ 0.83
CCDC90B-217ENST00000530253 FBXO3Q9UK99 471 aa20.21■□□□□ 0.83
CCDC90B-217ENST00000530253 ASTLQ6HA08 431 aaPredicted RBP20.2■□□□□ 0.82
CCDC90B-217ENST00000530253 KIF12Q96FN5 646 aa20.19■□□□□ 0.82
CCDC90B-217ENST00000530253 ATMINO43313 823 aaPredicted RBP20.12■□□□□ 0.81
CCDC90B-217ENST00000530253 SLC39A7Q92504 469 aa20.11■□□□□ 0.81
CCDC90B-217ENST00000530253 C7P10643 843 aa20.07■□□□□ 0.8
CCDC90B-217ENST00000530253 PELP1Q8IZL8 1130 aaKnown RBP20.07■□□□□ 0.8
CCDC90B-217ENST00000530253 MAP3K13O43283 966 aa20.06■□□□□ 0.8
CCDC90B-217ENST00000530253 NUBP1P53384 320 aa20.06■□□□□ 0.8
CCDC90B-217ENST00000530253 FAM212AQ96EL1 285 aa20.06■□□□□ 0.8
CCDC90B-217ENST00000530253 METRNQ9UJH8 293 aa20.05■□□□□ 0.8
CCDC90B-217ENST00000530253 SGIP1Q9BQI5 828 aa20.02■□□□□ 0.8
CCDC90B-217ENST00000530253 TIE1P35590 1138 aa20■□□□□ 0.79
CCDC90B-217ENST00000530253 ATN1P54259 1190 aaPredicted RBP19.95■□□□□ 0.78
CCDC90B-217ENST00000530253 BMP2KQ9NSY1 1161 aaPredicted RBP19.94■□□□□ 0.78
CCDC90B-217ENST00000530253 PCDHB13Q9Y5F0 798 aa19.93■□□□□ 0.78
CCDC90B-217ENST00000530253 POTEB2H3BUK9 544 aa19.92■□□□□ 0.78
CCDC90B-217ENST00000530253 OTUD5Q96G74 571 aa19.91■□□□□ 0.78
CCDC90B-217ENST00000530253 TRPC6Q9Y210 931 aa19.86■□□□□ 0.77
CCDC90B-217ENST00000530253 MAMSTRQ6ZN01 415 aa19.85■□□□□ 0.77
CCDC90B-217ENST00000530253 VASPP50552 380 aaPredicted RBP19.84■□□□□ 0.77
CCDC90B-217ENST00000530253 TTLL13PA6NNM8 815 aa19.82■□□□□ 0.76
CCDC90B-217ENST00000530253 DCAF8Q5TAQ9 597 aa19.81■□□□□ 0.76
CCDC90B-217ENST00000530253 KLHL34Q8N239 644 aa19.78■□□□□ 0.76
CCDC90B-217ENST00000530253 IFNL1Q8IU54 200 aa19.75■□□□□ 0.75
CCDC90B-217ENST00000530253 IER5LQ5T953 404 aa19.73■□□□□ 0.75
CCDC90B-217ENST00000530253 SCUBE2Q9NQ36 999 aa19.72■□□□□ 0.75
CCDC90B-217ENST00000530253 SEC24BO95487 1268 aa19.71■□□□□ 0.75
CCDC90B-217ENST00000530253 TRIM35Q9UPQ4 493 aa19.71■□□□□ 0.75
CCDC90B-217ENST00000530253 GSE1Q14687 1217 aa19.69■□□□□ 0.74
CCDC90B-217ENST00000530253 PYGBP11216 843 aa19.65■□□□□ 0.74
CCDC90B-217ENST00000530253 TMEM106CQ9BVX2 250 aa19.65■□□□□ 0.74
CCDC90B-217ENST00000530253 POTEJP0CG39 1038 aa19.64■□□□□ 0.73
CCDC90B-217ENST00000530253 POTEFA5A3E0 1075 aa19.62■□□□□ 0.73
CCDC90B-217ENST00000530253 COLQQ9Y215 455 aaPredicted RBP19.55■□□□□ 0.72
CCDC90B-217ENST00000530253 ZNF467Q7Z7K2 595 aaPredicted RBP19.52■□□□□ 0.72
CCDC90B-217ENST00000530253 PLCG2P16885 1265 aa19.49■□□□□ 0.71
CCDC90B-217ENST00000530253 CHRM1P11229 460 aaPredicted RBP19.47■□□□□ 0.71
CCDC90B-217ENST00000530253 SPOCK2Q92563 424 aa19.47■□□□□ 0.71
CCDC90B-217ENST00000530253 PCDHB8Q9UN66 801 aa19.47■□□□□ 0.71
CCDC90B-217ENST00000530253 IFNLR1Q8IU57 520 aaPredicted RBP19.4■□□□□ 0.7
CCDC90B-217ENST00000530253 POTEMA6NI47 508 aa19.39■□□□□ 0.69
CCDC90B-217ENST00000530253 IRX5P78411 483 aaPredicted RBP19.38■□□□□ 0.69
CCDC90B-217ENST00000530253 OCEL1Q9H607 264 aa19.37■□□□□ 0.69
CCDC90B-217ENST00000530253 POTEGQ6S5H5 508 aa19.35■□□□□ 0.69
CCDC90B-217ENST00000530253 GOLGA2Q08379 1002 aa19.34■□□□□ 0.69
CCDC90B-217ENST00000530253 CIZ1Q9ULV3 898 aaPredicted RBP19.32■□□□□ 0.68
CCDC90B-217ENST00000530253 FAM163AQ96GL9 167 aaPredicted RBP19.28■□□□□ 0.68
CCDC90B-217ENST00000530253 MKRN3Q13064 507 aaKnown RBP19.26■□□□□ 0.67
CCDC90B-217ENST00000530253 PSEN1P49768 467 aa19.25■□□□□ 0.67
CCDC90B-217ENST00000530253 SLAIN1Q8ND83 568 aa19.24■□□□□ 0.67
CCDC90B-217ENST00000530253 PCDH10Q9P2E7 1040 aa19.24■□□□□ 0.67
CCDC90B-217ENST00000530253 PDAP1Q13442 181 aaKnown RBP19.23■□□□□ 0.67
CCDC90B-217ENST00000530253 TRIM41Q8WV44 630 aa19.21■□□□□ 0.67
CCDC90B-217ENST00000530253 PLSCR2Q9NRY7 297 aa19.19■□□□□ 0.66
CCDC90B-217ENST00000530253 LCE2DQ5TA82 110 aaPredicted RBP19.15■□□□□ 0.66
CCDC90B-217ENST00000530253 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.14■□□□□ 0.65
CCDC90B-217ENST00000530253 L3MBTL3Q96JM7 780 aaPredicted RBP19.11■□□□□ 0.65
CCDC90B-217ENST00000530253 PDCD7Q8N8D1 485 aaKnown RBP19.1■□□□□ 0.65
CCDC90B-217ENST00000530253 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.09■□□□□ 0.65
CCDC90B-217ENST00000530253 C3orf67Q6ZVT6 689 aa19.04■□□□□ 0.64
CCDC90B-217ENST00000530253 SNPHO15079 494 aa19.03■□□□□ 0.64
CCDC90B-217ENST00000530253 CABP2Q9NPB3 220 aa19■□□□□ 0.63
CCDC90B-217ENST00000530253 ILDR1Q86SU0 546 aaPredicted RBP18.97■□□□□ 0.63
CCDC90B-217ENST00000530253 ST18O60284 1047 aa18.93■□□□□ 0.62
CCDC90B-217ENST00000530253 G3V3G9 751 aa18.92■□□□□ 0.62
CCDC90B-217ENST00000530253 TMEM121BQ9BXQ6 578 aaPredicted RBP18.91■□□□□ 0.62
CCDC90B-217ENST00000530253 RIOK3O14730 519 aaKnown RBP18.84■□□□□ 0.61
CCDC90B-217ENST00000530253 BOLA1Q9Y3E2 137 aa18.81■□□□□ 0.6
CCDC90B-217ENST00000530253 CDAN1Q8IWY9 1227 aa18.79■□□□□ 0.6
CCDC90B-217ENST00000530253 VGFO15240 615 aaPredicted RBP18.78■□□□□ 0.6
CCDC90B-217ENST00000530253 DPY19L2Q6NUT2 758 aa18.77■□□□□ 0.6
CCDC90B-217ENST00000530253 TAOK2Q9UL54 1235 aa18.76■□□□□ 0.59
CCDC90B-217ENST00000530253 EFCAB3Q8N7B9 438 aa18.75■□□□□ 0.59
CCDC90B-217ENST00000530253 RNF25Q96BH1 459 aaPredicted RBP18.71■□□□□ 0.59
CCDC90B-217ENST00000530253 SOX12O15370 315 aa18.69■□□□□ 0.58
CCDC90B-217ENST00000530253 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.68■□□□□ 0.58
CCDC90B-217ENST00000530253 ZFP91Q96JP5 570 aaPredicted RBP18.68■□□□□ 0.58
CCDC90B-217ENST00000530253 MARVELD3Q96A59 401 aa18.61■□□□□ 0.57
CCDC90B-217ENST00000530253 EMP3P54852 163 aa18.59■□□□□ 0.57
CCDC90B-217ENST00000530253 CCDC180Q9P1Z9 1646 aa18.56■□□□□ 0.56
CCDC90B-217ENST00000530253 DOK7Q18PE1 504 aa18.52■□□□□ 0.56
CCDC90B-217ENST00000530253 MICALL2Q8IY33 904 aa18.52■□□□□ 0.56
CCDC90B-217ENST00000530253 ECM2O94769 699 aaPredicted RBP18.5■□□□□ 0.55
CCDC90B-217ENST00000530253 ZNF710Q8N1W2 664 aa18.5■□□□□ 0.55
CCDC90B-217ENST00000530253 BCL11BQ9C0K0 894 aaPredicted RBP18.49■□□□□ 0.55
CCDC90B-217ENST00000530253 PHF8Q9UPP1 1060 aa18.49■□□□□ 0.55
CCDC90B-217ENST00000530253 NLRP6P59044 892 aa18.48■□□□□ 0.55
CCDC90B-217ENST00000530253 RIMBP2O15034 1052 aa18.47■□□□□ 0.55
CCDC90B-217ENST00000530253 HOXB3P14651 431 aaPredicted RBP18.45■□□□□ 0.54
CCDC90B-217ENST00000530253 MS4A4AQ96JQ5 239 aa18.45■□□□□ 0.54
CCDC90B-217ENST00000530253 STK24Q9Y6E0 443 aa18.45■□□□□ 0.54
CCDC90B-217ENST00000530253 STK25O00506 426 aa18.41■□□□□ 0.54
CCDC90B-217ENST00000530253 HS3ST6Q96QI5 342 aa18.41■□□□□ 0.54
CCDC90B-217ENST00000530253 FAM205CA6NFA0 338 aa18.4■□□□□ 0.54
CCDC90B-217ENST00000530253 HOXB1P14653 301 aaPredicted RBP18.38■□□□□ 0.53
CCDC90B-217ENST00000530253 FBXO22Q8NEZ5 403 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms