RNA–Protein interactions for RNA: ENST00000528773.1

SUSD1-208, Transcript of sushi domain containing 1, humanhuman

TSL 4

Gene SUSD1, Length 540 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD1-208ENST00000528773 DNAJC5Q9H3Z4 198 aa10.85□□□□□ -0.67
SUSD1-208ENST00000528773 DCAF1Q9Y4B6 1507 aa10.84□□□□□ -0.67
SUSD1-208ENST00000528773 PELP1Q8IZL8 1130 aaKnown RBP10.84□□□□□ -0.67
SUSD1-208ENST00000528773 LCE2DQ5TA82 110 aaPredicted RBP10.83□□□□□ -0.68
SUSD1-208ENST00000528773 EIF4G1Q04637 1599 aaKnown RBP10.82□□□□□ -0.68
SUSD1-208ENST00000528773 POTEJP0CG39 1038 aa10.81□□□□□ -0.68
SUSD1-208ENST00000528773 PCDH10Q9P2E7 1040 aa10.79□□□□□ -0.68
SUSD1-208ENST00000528773 ZCCHC6Q5VYS8 1495 aaKnown RBP10.79□□□□□ -0.68
SUSD1-208ENST00000528773 PHF12Q96QT6 1004 aa10.73□□□□□ -0.69
SUSD1-208ENST00000528773 CREBZFQ9NS37 354 aa10.73□□□□□ -0.69
SUSD1-208ENST00000528773 SCRIBQ14160 1630 aa10.69□□□□□ -0.7
SUSD1-208ENST00000528773 METRNQ9UJH8 293 aa10.65□□□□□ -0.7
SUSD1-208ENST00000528773 FAM163AQ96GL9 167 aaPredicted RBP10.64□□□□□ -0.71
SUSD1-208ENST00000528773 ASTLQ6HA08 431 aaPredicted RBP10.6□□□□□ -0.71
SUSD1-208ENST00000528773 ATMINO43313 823 aaPredicted RBP10.58□□□□□ -0.72
SUSD1-208ENST00000528773 MS4A3Q96HJ5 214 aa10.55□□□□□ -0.72
SUSD1-208ENST00000528773 C7P10643 843 aa10.54□□□□□ -0.72
SUSD1-208ENST00000528773 SLC39A7Q92504 469 aa10.54□□□□□ -0.72
SUSD1-208ENST00000528773 CUX2O14529 1486 aa10.53□□□□□ -0.72
SUSD1-208ENST00000528773 PAK3O75914 559 aaPredicted RBP10.51□□□□□ -0.73
SUSD1-208ENST00000528773 MAMSTRQ6ZN01 415 aa10.51□□□□□ -0.73
SUSD1-208ENST00000528773 POTEFA5A3E0 1075 aa10.5□□□□□ -0.73
SUSD1-208ENST00000528773 MNX1P50219 401 aaPredicted RBP10.5□□□□□ -0.73
SUSD1-208ENST00000528773 CDAN1Q8IWY9 1227 aa10.47□□□□□ -0.73
SUSD1-208ENST00000528773 ATN1P54259 1190 aaPredicted RBP10.45□□□□□ -0.74
SUSD1-208ENST00000528773 SCUBE2Q9NQ36 999 aa10.45□□□□□ -0.74
SUSD1-208ENST00000528773 NCAPD3P42695 1498 aa10.44□□□□□ -0.74
SUSD1-208ENST00000528773 STAG3Q9UJ98 1225 aa10.41□□□□□ -0.74
SUSD1-208ENST00000528773 ERCC6Q03468 1493 aa10.36□□□□□ -0.75
SUSD1-208ENST00000528773 TRPC6Q9Y210 931 aa10.36□□□□□ -0.75
SUSD1-208ENST00000528773 NPM1P06748 294 aaKnown RBP eCLIP10.35□□□□□ -0.75
SUSD1-208ENST00000528773 ATAD2BQ9ULI0 1458 aa10.34□□□□□ -0.75
SUSD1-208ENST00000528773 BMP2KQ9NSY1 1161 aaPredicted RBP10.32□□□□□ -0.76
SUSD1-208ENST00000528773 COLQQ9Y215 455 aaPredicted RBP10.31□□□□□ -0.76
SUSD1-208ENST00000528773 HMGXB3Q12766 1538 aa10.31□□□□□ -0.76
SUSD1-208ENST00000528773 MMRN1Q13201 1228 aa10.3□□□□□ -0.76
SUSD1-208ENST00000528773 NESP48681 1621 aa10.29□□□□□ -0.76
SUSD1-208ENST00000528773 CCDC61Q9Y6R9 512 aa10.28□□□□□ -0.76
SUSD1-208ENST00000528773 ST18O60284 1047 aa10.27□□□□□ -0.77
SUSD1-208ENST00000528773 TSPYL2Q9H2G4 693 aaPredicted RBP10.27□□□□□ -0.77
SUSD1-208ENST00000528773 THOC2Q8NI27 1593 aaKnown RBP10.26□□□□□ -0.77
SUSD1-208ENST00000528773 KIF12Q96FN5 646 aa10.26□□□□□ -0.77
SUSD1-208ENST00000528773 SMARCA2P51531 1590 aa10.26□□□□□ -0.77
SUSD1-208ENST00000528773 SPNS2Q8IVW8 549 aa10.25□□□□□ -0.77
SUSD1-208ENST00000528773 SMARCA4P51532 1647 aa10.23□□□□□ -0.77
SUSD1-208ENST00000528773 PEG3Q9GZU2 1588 aa10.21□□□□□ -0.78
SUSD1-208ENST00000528773 LAMC3Q9Y6N6 1575 aa10.19□□□□□ -0.78
SUSD1-208ENST00000528773 SPDYE4A6NLX3 237 aa10.18□□□□□ -0.78
SUSD1-208ENST00000528773 MAP3K13O43283 966 aa10.17□□□□□ -0.78
SUSD1-208ENST00000528773 TIE1P35590 1138 aa10.17□□□□□ -0.78
SUSD1-208ENST00000528773 BAZ1BQ9UIG0 1483 aaKnown RBP10.17□□□□□ -0.78
SUSD1-208ENST00000528773 TTLL13PA6NNM8 815 aa10.16□□□□□ -0.78
SUSD1-208ENST00000528773 SLAIN1Q8ND83 568 aa10.15□□□□□ -0.78
SUSD1-208ENST00000528773 SEC24BO95487 1268 aa10.14□□□□□ -0.79
SUSD1-208ENST00000528773 BAZ1AQ9NRL2 1556 aaPredicted RBP10.14□□□□□ -0.79
SUSD1-208ENST00000528773 KIF21AQ7Z4S6 1674 aa10.12□□□□□ -0.79
SUSD1-208ENST00000528773 PDS5BQ9NTI5 1447 aa10.12□□□□□ -0.79
SUSD1-208ENST00000528773 TRIM41Q8WV44 630 aa10.11□□□□□ -0.79
SUSD1-208ENST00000528773 TRIM35Q9UPQ4 493 aa10.08□□□□□ -0.8
SUSD1-208ENST00000528773 WDR62O43379 1518 aa10.07□□□□□ -0.8
SUSD1-208ENST00000528773 CADPSQ9ULU8 1353 aa10.07□□□□□ -0.8
SUSD1-208ENST00000528773 MROH2BQ7Z745 1585 aa10.06□□□□□ -0.8
SUSD1-208ENST00000528773 MRC2Q9UBG0 1479 aa10.05□□□□□ -0.8
SUSD1-208ENST00000528773 IER5LQ5T953 404 aa10.04□□□□□ -0.8
SUSD1-208ENST00000528773 MARVELD3Q96A59 401 aa10.04□□□□□ -0.8
SUSD1-208ENST00000528773 RASEFQ8IZ41 740 aa10.02□□□□□ -0.81
SUSD1-208ENST00000528773 TMEM121BQ9BXQ6 578 aaPredicted RBP9.99□□□□□ -0.81
SUSD1-208ENST00000528773 KRTAP3-3Q9BYR6 98 aa9.96□□□□□ -0.82
SUSD1-208ENST00000528773 KRTAP3-2Q9BYR7 98 aa9.96□□□□□ -0.82
SUSD1-208ENST00000528773 POTEB3A0JP26 581 aa9.95□□□□□ -0.82
SUSD1-208ENST00000528773 POTEBQ6S5H4 581 aa9.95□□□□□ -0.82
SUSD1-208ENST00000528773 CEP164Q9UPV0 1460 aa9.94□□□□□ -0.82
SUSD1-208ENST00000528773 IRX5P78411 483 aaPredicted RBP9.93□□□□□ -0.82
SUSD1-208ENST00000528773 CFTRP13569 1480 aa9.92□□□□□ -0.82
SUSD1-208ENST00000528773 FANCD2Q9BXW9 1451 aa9.92□□□□□ -0.82
SUSD1-208ENST00000528773 PCDHB13Q9Y5F0 798 aa9.91□□□□□ -0.82
SUSD1-208ENST00000528773 PLCG2P16885 1265 aa9.9□□□□□ -0.82
SUSD1-208ENST00000528773 CSRNP3Q8WYN3 585 aa9.9□□□□□ -0.82
SUSD1-208ENST00000528773 URB2Q14146 1524 aaKnown RBP9.89□□□□□ -0.83
SUSD1-208ENST00000528773 IFNL1Q8IU54 200 aa9.89□□□□□ -0.83
SUSD1-208ENST00000528773 WIZO95785 1651 aa9.89□□□□□ -0.83
SUSD1-208ENST00000528773 PROM2Q8N271 834 aa9.88□□□□□ -0.83
SUSD1-208ENST00000528773 RIMBP3CA6NJZ7 1639 aa9.87□□□□□ -0.83
SUSD1-208ENST00000528773 RIMBP3BA6NNM3 1639 aa9.87□□□□□ -0.83
SUSD1-208ENST00000528773 RIMBP3Q9UFD9 1639 aa9.87□□□□□ -0.83
SUSD1-208ENST00000528773 SGIP1Q9BQI5 828 aa9.87□□□□□ -0.83
SUSD1-208ENST00000528773 TMEM106CQ9BVX2 250 aa9.87□□□□□ -0.83
SUSD1-208ENST00000528773 SNPHO15079 494 aa9.84□□□□□ -0.83
SUSD1-208ENST00000528773 ARHGEF11O15085 1522 aa9.83□□□□□ -0.84
SUSD1-208ENST00000528773 HS3ST6Q96QI5 342 aa9.83□□□□□ -0.84
SUSD1-208ENST00000528773 EMP3P54852 163 aa9.82□□□□□ -0.84
SUSD1-208ENST00000528773 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.8□□□□□ -0.84
SUSD1-208ENST00000528773 ZNF608Q9ULD9 1512 aaPredicted RBP9.8□□□□□ -0.84
SUSD1-208ENST00000528773 FAM205CA6NFA0 338 aa9.79□□□□□ -0.84
SUSD1-208ENST00000528773 OCEL1Q9H607 264 aa9.79□□□□□ -0.84
SUSD1-208ENST00000528773 MIER1Q8N108 512 aa9.78□□□□□ -0.84
SUSD1-208ENST00000528773 IFT140Q96RY7 1462 aa9.78□□□□□ -0.84
SUSD1-208ENST00000528773 RSF1Q96T23 1441 aaPredicted RBP9.77□□□□□ -0.85
SUSD1-208ENST00000528773 TOP2AP11388 1531 aaKnown RBP9.77□□□□□ -0.85
SUSD1-208ENST00000528773 NUBP1P53384 320 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms