RNA–Protein interactions for RNA: ENST00000527003.5

C11orf54-204, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 5

Gene C11orf54, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-204ENST00000527003 PCDH10Q9P2E7 1040 aa8.71□□□□□ -1.02
C11orf54-204ENST00000527003 METRNQ9UJH8 293 aa8.7□□□□□ -1.02
C11orf54-204ENST00000527003 C7P10643 843 aa8.69□□□□□ -1.02
C11orf54-204ENST00000527003 SLC39A7Q92504 469 aa8.69□□□□□ -1.02
C11orf54-204ENST00000527003 ATMINO43313 823 aaPredicted RBP8.67□□□□□ -1.02
C11orf54-204ENST00000527003 MAMSTRQ6ZN01 415 aa8.67□□□□□ -1.02
C11orf54-204ENST00000527003 MS4A3Q96HJ5 214 aa8.67□□□□□ -1.02
C11orf54-204ENST00000527003 POTEJP0CG39 1038 aa8.63□□□□□ -1.03
C11orf54-204ENST00000527003 SCUBE2Q9NQ36 999 aa8.59□□□□□ -1.03
C11orf54-204ENST00000527003 LCE2DQ5TA82 110 aaPredicted RBP8.56□□□□□ -1.04
C11orf54-204ENST00000527003 TSPYL2Q9H2G4 693 aaPredicted RBP8.56□□□□□ -1.04
C11orf54-204ENST00000527003 CCDC61Q9Y6R9 512 aa8.56□□□□□ -1.04
C11orf54-204ENST00000527003 ATN1P54259 1190 aaPredicted RBP8.55□□□□□ -1.04
C11orf54-204ENST00000527003 FAM163AQ96GL9 167 aaPredicted RBP8.53□□□□□ -1.04
C11orf54-204ENST00000527003 KIF12Q96FN5 646 aa8.52□□□□□ -1.05
C11orf54-204ENST00000527003 PROM2Q8N271 834 aa8.51□□□□□ -1.05
C11orf54-204ENST00000527003 BMP2KQ9NSY1 1161 aaPredicted RBP8.51□□□□□ -1.05
C11orf54-204ENST00000527003 POTEFA5A3E0 1075 aa8.48□□□□□ -1.05
C11orf54-204ENST00000527003 TIE1P35590 1138 aa8.48□□□□□ -1.05
C11orf54-204ENST00000527003 MAP3K13O43283 966 aa8.45□□□□□ -1.06
C11orf54-204ENST00000527003 TRPC6Q9Y210 931 aa8.45□□□□□ -1.06
C11orf54-204ENST00000527003 PLEKHG5O94827 1062 aa8.44□□□□□ -1.06
C11orf54-204ENST00000527003 SEC24BO95487 1268 aa8.42□□□□□ -1.06
C11orf54-204ENST00000527003 TTLL13PA6NNM8 815 aa8.41□□□□□ -1.06
C11orf54-204ENST00000527003 COLQQ9Y215 455 aaPredicted RBP8.41□□□□□ -1.06
C11orf54-204ENST00000527003 IER5LQ5T953 404 aa8.4□□□□□ -1.06
C11orf54-204ENST00000527003 RASEFQ8IZ41 740 aa8.39□□□□□ -1.07
C11orf54-204ENST00000527003 CDAN1Q8IWY9 1227 aa8.38□□□□□ -1.07
C11orf54-204ENST00000527003 SGIP1Q9BQI5 828 aa8.38□□□□□ -1.07
C11orf54-204ENST00000527003 MIER1Q8N108 512 aa8.37□□□□□ -1.07
C11orf54-204ENST00000527003 TRIM35Q9UPQ4 493 aa8.36□□□□□ -1.07
C11orf54-204ENST00000527003 PCDHB13Q9Y5F0 798 aa8.33□□□□□ -1.08
C11orf54-204ENST00000527003 SLAIN1Q8ND83 568 aa8.31□□□□□ -1.08
C11orf54-204ENST00000527003 ST18O60284 1047 aa8.3□□□□□ -1.08
C11orf54-204ENST00000527003 PLCD3Q8N3E9 789 aa8.28□□□□□ -1.08
C11orf54-204ENST00000527003 ZBTB47Q9UFB7 747 aaPredicted RBP8.28□□□□□ -1.08
C11orf54-204ENST00000527003 PLCG2P16885 1265 aa8.27□□□□□ -1.09
C11orf54-204ENST00000527003 IFNL1Q8IU54 200 aa8.27□□□□□ -1.09
C11orf54-204ENST00000527003 NUBP1P53384 320 aa8.25□□□□□ -1.09
C11orf54-204ENST00000527003 TMEM106CQ9BVX2 250 aa8.25□□□□□ -1.09
C11orf54-204ENST00000527003 TMEM121BQ9BXQ6 578 aaPredicted RBP8.25□□□□□ -1.09
C11orf54-204ENST00000527003 IRX5P78411 483 aaPredicted RBP8.23□□□□□ -1.09
C11orf54-204ENST00000527003 FAM212AQ96EL1 285 aa8.23□□□□□ -1.09
C11orf54-204ENST00000527003 SNPHO15079 494 aa8.2□□□□□ -1.1
C11orf54-204ENST00000527003 MMRN1Q13201 1228 aa8.2□□□□□ -1.1
C11orf54-204ENST00000527003 SPNS2Q8IVW8 549 aa8.19□□□□□ -1.1
C11orf54-204ENST00000527003 OCEL1Q9H607 264 aa8.19□□□□□ -1.1
C11orf54-204ENST00000527003 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.16□□□□□ -1.1
C11orf54-204ENST00000527003 MARVELD3Q96A59 401 aa8.12□□□□□ -1.11
C11orf54-204ENST00000527003 PYGBP11216 843 aa8.08□□□□□ -1.12
C11orf54-204ENST00000527003 EMP3P54852 163 aa8.06□□□□□ -1.12
C11orf54-204ENST00000527003 DCAF8Q5TAQ9 597 aa8.06□□□□□ -1.12
C11orf54-204ENST00000527003 C3orf67Q6ZVT6 689 aa8.06□□□□□ -1.12
C11orf54-204ENST00000527003 PDCD7Q8N8D1 485 aaKnown RBP8.05□□□□□ -1.12
C11orf54-204ENST00000527003 PCDHB8Q9UN66 801 aa8.05□□□□□ -1.12
C11orf54-204ENST00000527003 FKBP8Q14318 412 aa8.03□□□□□ -1.12
C11orf54-204ENST00000527003 L3MBTL3Q96JM7 780 aaPredicted RBP8.03□□□□□ -1.12
C11orf54-204ENST00000527003 GOLGA2Q08379 1002 aa8.01□□□□□ -1.13
C11orf54-204ENST00000527003 MKRN3Q13064 507 aaKnown RBP8.01□□□□□ -1.13
C11orf54-204ENST00000527003 ZNF467Q7Z7K2 595 aaPredicted RBP8.01□□□□□ -1.13
C11orf54-204ENST00000527003 HS3ST6Q96QI5 342 aa8□□□□□ -1.13
C11orf54-204ENST00000527003 KRTAP3-3Q9BYR6 98 aa8□□□□□ -1.13
C11orf54-204ENST00000527003 KRTAP3-2Q9BYR7 98 aa8□□□□□ -1.13
C11orf54-204ENST00000527003 FAM205CA6NFA0 338 aa7.98□□□□□ -1.13
C11orf54-204ENST00000527003 POTEB3A0JP26 581 aa7.97□□□□□ -1.13
C11orf54-204ENST00000527003 POTEBQ6S5H4 581 aa7.97□□□□□ -1.13
C11orf54-204ENST00000527003 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.97□□□□□ -1.138e-8■■□□□ 14.4
C11orf54-204ENST00000527003 GSE1Q14687 1217 aa7.96□□□□□ -1.14
C11orf54-204ENST00000527003 CHRM1P11229 460 aaPredicted RBP7.94□□□□□ -1.14
C11orf54-204ENST00000527003 FBXO3Q9UK99 471 aa7.94□□□□□ -1.14
C11orf54-204ENST00000527003 ILDR1Q86SU0 546 aaPredicted RBP7.93□□□□□ -1.14
C11orf54-204ENST00000527003 PSEN1P49768 467 aa7.92□□□□□ -1.14
C11orf54-204ENST00000527003 HOXB3P14651 431 aaPredicted RBP7.88□□□□□ -1.15
C11orf54-204ENST00000527003 G3V3G9 751 aa7.87□□□□□ -1.15
C11orf54-204ENST00000527003 PDAP1Q13442 181 aaKnown RBP7.87□□□□□ -1.15
C11orf54-204ENST00000527003 KLHL34Q8N239 644 aa7.87□□□□□ -1.15
C11orf54-204ENST00000527003 BOLA1Q9Y3E2 137 aa7.87□□□□□ -1.15
C11orf54-204ENST00000527003 HOXB1P14653 301 aaPredicted RBP7.86□□□□□ -1.15
C11orf54-204ENST00000527003 DPY19L2Q6NUT2 758 aa7.85□□□□□ -1.15
C11orf54-204ENST00000527003 ZNF710Q8N1W2 664 aa7.85□□□□□ -1.15
C11orf54-204ENST00000527003 VASPP50552 380 aaPredicted RBP7.84□□□□□ -1.15
C11orf54-204ENST00000527003 DOK7Q18PE1 504 aa7.84□□□□□ -1.15
C11orf54-204ENST00000527003 RNF166Q96A37 237 aaPredicted RBP7.83□□□□□ -1.16
C11orf54-204ENST00000527003 ERBB3P21860 1342 aa7.82□□□□□ -1.16
C11orf54-204ENST00000527003 CABP2Q9NPB3 220 aa7.81□□□□□ -1.16
C11orf54-204ENST00000527003 RIMBP2O15034 1052 aa7.8□□□□□ -1.16
C11orf54-204ENST00000527003 MYT1LQ9UL68 1186 aa7.77□□□□□ -1.17
C11orf54-204ENST00000527003 VARS2Q5ST30 1063 aaKnown RBP7.76□□□□□ -1.17
C11orf54-204ENST00000527003 ZSWIM6Q9HCJ5 1215 aa7.76□□□□□ -1.17
C11orf54-204ENST00000527003 PTGER2P43116 358 aa7.74□□□□□ -1.17
C11orf54-204ENST00000527003 ZNF687Q8N1G0 1237 aa7.73□□□□□ -1.17
C11orf54-204ENST00000527003 SPOCK2Q92563 424 aa7.71□□□□□ -1.18
C11orf54-204ENST00000527003 CIZ1Q9ULV3 898 aaPredicted RBP7.7□□□□□ -1.18
C11orf54-204ENST00000527003 GPR153Q6NV75 609 aa7.68□□□□□ -1.18
C11orf54-204ENST00000527003 MICALL2Q8IY33 904 aa7.68□□□□□ -1.18
C11orf54-204ENST00000527003 EFCAB3Q8N7B9 438 aa7.68□□□□□ -1.18
C11orf54-204ENST00000527003 TMEM92Q6UXU6 159 aa7.66□□□□□ -1.18
C11orf54-204ENST00000527003 TRIM41Q8WV44 630 aa7.65□□□□□ -1.18
C11orf54-204ENST00000527003 CCDC180Q9P1Z9 1646 aa7.65□□□□□ -1.18
C11orf54-204ENST00000527003 IFNLR1Q8IU57 520 aaPredicted RBP7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms