RNA–Protein interactions for RNA: ENST00000526653.1

SF3B2-205, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 329 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-205ENST00000526653 FBXO3Q9UK99 471 aa12.42□□□□□ -0.42
SF3B2-205ENST00000526653 CCDC61Q9Y6R9 512 aa12.42□□□□□ -0.42
SF3B2-205ENST00000526653 ZBTB47Q9UFB7 747 aaPredicted RBP12.4□□□□□ -0.42
SF3B2-205ENST00000526653 MS4A3Q96HJ5 214 aa12.39□□□□□ -0.43
SF3B2-205ENST00000526653 LHX8Q68G74 356 aa12.37□□□□□ -0.43
SF3B2-205ENST00000526653 NUBP1P53384 320 aa12.35□□□□□ -0.43
SF3B2-205ENST00000526653 KIF12Q96FN5 646 aa12.34□□□□□ -0.43
SF3B2-205ENST00000526653 VASPP50552 380 aaPredicted RBP12.29□□□□□ -0.44
SF3B2-205ENST00000526653 MAP3K13O43283 966 aa12.28□□□□□ -0.44
SF3B2-205ENST00000526653 PELP1Q8IZL8 1130 aaKnown RBP12.26□□□□□ -0.45
SF3B2-205ENST00000526653 ASTLQ6HA08 431 aaPredicted RBP12.25□□□□□ -0.45
SF3B2-205ENST00000526653 FAM212AQ96EL1 285 aa12.25□□□□□ -0.45
SF3B2-205ENST00000526653 ATMINO43313 823 aaPredicted RBP12.24□□□□□ -0.45
SF3B2-205ENST00000526653 TRPC6Q9Y210 931 aa12.22□□□□□ -0.45
SF3B2-205ENST00000526653 KLHL34Q8N239 644 aa12.2□□□□□ -0.46
SF3B2-205ENST00000526653 BMP2KQ9NSY1 1161 aaPredicted RBP12.18□□□□□ -0.46
SF3B2-205ENST00000526653 ATN1P54259 1190 aaPredicted RBP12.17□□□□□ -0.46
SF3B2-205ENST00000526653 DCAF8Q5TAQ9 597 aa12.17□□□□□ -0.46
SF3B2-205ENST00000526653 PCDHB13Q9Y5F0 798 aa12.17□□□□□ -0.46
SF3B2-205ENST00000526653 SGIP1Q9BQI5 828 aa12.16□□□□□ -0.46
SF3B2-205ENST00000526653 POTEB2H3BUK9 544 aa12.14□□□□□ -0.47
SF3B2-205ENST00000526653 TIE1P35590 1138 aa12.14□□□□□ -0.47
SF3B2-205ENST00000526653 SLC39A7Q92504 469 aa12.14□□□□□ -0.47
SF3B2-205ENST00000526653 METRNQ9UJH8 293 aa12.14□□□□□ -0.47
SF3B2-205ENST00000526653 CCDC180Q9P1Z9 1646 aa12.14□□□□□ -0.47
SF3B2-205ENST00000526653 C7P10643 843 aa12.12□□□□□ -0.47
SF3B2-205ENST00000526653 IFNL1Q8IU54 200 aa12.12□□□□□ -0.47
SF3B2-205ENST00000526653 PYGBP11216 843 aa12.1□□□□□ -0.47
SF3B2-205ENST00000526653 TTLL13PA6NNM8 815 aa12.09□□□□□ -0.47
SF3B2-205ENST00000526653 IFNLR1Q8IU57 520 aaPredicted RBP12.09□□□□□ -0.47
SF3B2-205ENST00000526653 GSE1Q14687 1217 aa12.05□□□□□ -0.48
SF3B2-205ENST00000526653 OTUD5Q96G74 571 aa12.05□□□□□ -0.48
SF3B2-205ENST00000526653 DCAF8L2P0C7V8 631 aa12.02□□□□□ -0.49
SF3B2-205ENST00000526653 SPOCK2Q92563 424 aa12.02□□□□□ -0.49
SF3B2-205ENST00000526653 TRIM35Q9UPQ4 493 aa12.02□□□□□ -0.49
SF3B2-205ENST00000526653 POTEFA5A3E0 1075 aa12□□□□□ -0.49
SF3B2-205ENST00000526653 POTEJP0CG39 1038 aa12□□□□□ -0.49
SF3B2-205ENST00000526653 TMEM106CQ9BVX2 250 aa12□□□□□ -0.49
SF3B2-205ENST00000526653 PCDHB8Q9UN66 801 aa12□□□□□ -0.49
SF3B2-205ENST00000526653 DNAJC5Q9H3Z4 198 aa11.96□□□□□ -0.49
SF3B2-205ENST00000526653 COLQQ9Y215 455 aaPredicted RBP11.95□□□□□ -0.5
SF3B2-205ENST00000526653 CHRM1P11229 460 aaPredicted RBP11.94□□□□□ -0.5
SF3B2-205ENST00000526653 IER5LQ5T953 404 aa11.94□□□□□ -0.5
SF3B2-205ENST00000526653 SEC24BO95487 1268 aa11.93□□□□□ -0.5
SF3B2-205ENST00000526653 CIZ1Q9ULV3 898 aaPredicted RBP11.93□□□□□ -0.5
SF3B2-205ENST00000526653 RB1CC1Q8TDY2 1594 aa11.92□□□□□ -0.5
SF3B2-205ENST00000526653 MAMSTRQ6ZN01 415 aa11.9□□□□□ -0.5
SF3B2-205ENST00000526653 ZNF467Q7Z7K2 595 aaPredicted RBP11.9□□□□□ -0.5
SF3B2-205ENST00000526653 SCUBE2Q9NQ36 999 aa11.85□□□□□ -0.51
SF3B2-205ENST00000526653 IRX5P78411 483 aaPredicted RBP11.84□□□□□ -0.51
SF3B2-205ENST00000526653 PLCG2P16885 1265 aa11.82□□□□□ -0.52
SF3B2-205ENST00000526653 PSEN1P49768 467 aa11.82□□□□□ -0.52
SF3B2-205ENST00000526653 OCEL1Q9H607 264 aa11.78□□□□□ -0.52
SF3B2-205ENST00000526653 PDAP1Q13442 181 aaKnown RBP11.77□□□□□ -0.53
SF3B2-205ENST00000526653 GOLGA2Q08379 1002 aa11.75□□□□□ -0.53
SF3B2-205ENST00000526653 TRIM41Q8WV44 630 aa11.75□□□□□ -0.53
SF3B2-205ENST00000526653 MKRN3Q13064 507 aaKnown RBP11.73□□□□□ -0.53
SF3B2-205ENST00000526653 NACADO15069 1562 aa11.72□□□□□ -0.53
SF3B2-205ENST00000526653 PDCD7Q8N8D1 485 aaKnown RBP11.69□□□□□ -0.54
SF3B2-205ENST00000526653 CABP2Q9NPB3 220 aa11.67□□□□□ -0.54
SF3B2-205ENST00000526653 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.67□□□□□ -0.54
SF3B2-205ENST00000526653 SLAIN1Q8ND83 568 aa11.66□□□□□ -0.54
SF3B2-205ENST00000526653 CECR2Q9BXF3 1484 aa11.65□□□□□ -0.54
SF3B2-205ENST00000526653 FAM163AQ96GL9 167 aaPredicted RBP11.65□□□□□ -0.54
SF3B2-205ENST00000526653 POTEMA6NI47 508 aa11.64□□□□□ -0.55
SF3B2-205ENST00000526653 LCE2DQ5TA82 110 aaPredicted RBP11.64□□□□□ -0.55
SF3B2-205ENST00000526653 RNF25Q96BH1 459 aaPredicted RBP11.64□□□□□ -0.55
SF3B2-205ENST00000526653 POTEGQ6S5H5 508 aa11.62□□□□□ -0.55
SF3B2-205ENST00000526653 ILDR1Q86SU0 546 aaPredicted RBP11.62□□□□□ -0.55
SF3B2-205ENST00000526653 RIOK3O14730 519 aaKnown RBP11.61□□□□□ -0.55
SF3B2-205ENST00000526653 BICRAQ9NZM4 1560 aa11.6□□□□□ -0.55
SF3B2-205ENST00000526653 L3MBTL3Q96JM7 780 aaPredicted RBP11.58□□□□□ -0.56
SF3B2-205ENST00000526653 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.58□□□□□ -0.56
SF3B2-205ENST00000526653 DPY19L2Q6NUT2 758 aa11.57□□□□□ -0.56
SF3B2-205ENST00000526653 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.56□□□□□ -0.56
SF3B2-205ENST00000526653 EFCAB3Q8N7B9 438 aa11.56□□□□□ -0.56
SF3B2-205ENST00000526653 ZFP91Q96JP5 570 aaPredicted RBP11.56□□□□□ -0.56
SF3B2-205ENST00000526653 VGFO15240 615 aaPredicted RBP11.55□□□□□ -0.56
SF3B2-205ENST00000526653 C3orf67Q6ZVT6 689 aa11.54□□□□□ -0.56
SF3B2-205ENST00000526653 CC2D2AQ9P2K1 1620 aa11.53□□□□□ -0.56
SF3B2-205ENST00000526653 UNC13AQ9UPW8 1703 aa11.52□□□□□ -0.57
SF3B2-205ENST00000526653 ECM2O94769 699 aaPredicted RBP11.49□□□□□ -0.57
SF3B2-205ENST00000526653 PKD2Q13563 968 aa11.48□□□□□ -0.57
SF3B2-205ENST00000526653 BOLA1Q9Y3E2 137 aa11.48□□□□□ -0.57
SF3B2-205ENST00000526653 ST18O60284 1047 aa11.47□□□□□ -0.57
SF3B2-205ENST00000526653 G3V3G9 751 aa11.45□□□□□ -0.58
SF3B2-205ENST00000526653 SOX12O15370 315 aa11.44□□□□□ -0.58
SF3B2-205ENST00000526653 TAOK2Q9UL54 1235 aa11.44□□□□□ -0.58
SF3B2-205ENST00000526653 SNPHO15079 494 aa11.43□□□□□ -0.58
SF3B2-205ENST00000526653 BCL11BQ9C0K0 894 aaPredicted RBP11.43□□□□□ -0.58
SF3B2-205ENST00000526653 PLSCR2Q9NRY7 297 aa11.42□□□□□ -0.58
SF3B2-205ENST00000526653 RGL2O15211 777 aa11.41□□□□□ -0.58
SF3B2-205ENST00000526653 MS4A4AQ96JQ5 239 aa11.41□□□□□ -0.58
SF3B2-205ENST00000526653 TMEM121BQ9BXQ6 578 aaPredicted RBP11.41□□□□□ -0.58
SF3B2-205ENST00000526653 PCDH10Q9P2E7 1040 aa11.41□□□□□ -0.58
SF3B2-205ENST00000526653 PHF8Q9UPP1 1060 aa11.41□□□□□ -0.58
SF3B2-205ENST00000526653 STK24Q9Y6E0 443 aa11.4□□□□□ -0.58
SF3B2-205ENST00000526653 STK25O00506 426 aa11.37□□□□□ -0.59
SF3B2-205ENST00000526653 EIF4G1Q04637 1599 aaKnown RBP11.37□□□□□ -0.59
SF3B2-205ENST00000526653 MYO15BQ96JP2 1530 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms