RNA–Protein interactions for RNA: ENST00000526631.1

CCDC90B-207, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 628 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-207ENST00000526631 NESP48681 1621 aa15.01□□□□□ -0.01
CCDC90B-207ENST00000526631 RSF1Q96T23 1441 aaPredicted RBP14.98□□□□□ -0.01
CCDC90B-207ENST00000526631 TOP2AP11388 1531 aaKnown RBP14.93□□□□□ -0.02
CCDC90B-207ENST00000526631 DNAJC5Q9H3Z4 198 aa14.91□□□□□ -0.02
CCDC90B-207ENST00000526631 SSUH2Q9Y2M2 353 aa14.91□□□□□ -0.02
CCDC90B-207ENST00000526631 KIF21AQ7Z4S6 1674 aa14.89□□□□□ -0.03
CCDC90B-207ENST00000526631 THOC2Q8NI27 1593 aaKnown RBP14.88□□□□□ -0.03
CCDC90B-207ENST00000526631 MKRN4PQ13434 485 aaPredicted RBP14.86□□□□□ -0.03
CCDC90B-207ENST00000526631 CFTRP13569 1480 aa14.85□□□□□ -0.03
CCDC90B-207ENST00000526631 MRC2Q9UBG0 1479 aa14.85□□□□□ -0.03
CCDC90B-207ENST00000526631 CEP164Q9UPV0 1460 aa14.84□□□□□ -0.03
CCDC90B-207ENST00000526631 FBLN2P98095 1184 aa14.83□□□□□ -0.04
CCDC90B-207ENST00000526631 FANCD2Q9BXW9 1451 aa14.81□□□□□ -0.04
CCDC90B-207ENST00000526631 CD44P16070 742 aaKnown RBP14.79□□□□□ -0.04
CCDC90B-207ENST00000526631 ZNF692Q9BU19 519 aaPredicted RBP14.79□□□□□ -0.04
CCDC90B-207ENST00000526631 WDR62O43379 1518 aa14.77□□□□□ -0.04
CCDC90B-207ENST00000526631 SLC4A1APQ9BWU0 796 aaKnown RBP14.77□□□□□ -0.05
CCDC90B-207ENST00000526631 PRDM2Q13029 1718 aa14.77□□□□□ -0.05
CCDC90B-207ENST00000526631 ZBTB22O15209 634 aa14.74□□□□□ -0.05
CCDC90B-207ENST00000526631 OTUD5Q96G74 571 aa14.74□□□□□ -0.05
CCDC90B-207ENST00000526631 CCDC88BA6NC98 1476 aa14.72□□□□□ -0.05
CCDC90B-207ENST00000526631 PRR29P0C7W0 189 aa14.71□□□□□ -0.05
CCDC90B-207ENST00000526631 ABCC8Q09428 1581 aa14.7□□□□□ -0.06
CCDC90B-207ENST00000526631 POTEMA6NI47 508 aa14.68□□□□□ -0.06
CCDC90B-207ENST00000526631 ATXN8OSP0DMR3 200 aa14.68□□□□□ -0.06
CCDC90B-207ENST00000526631 POTEB2H3BUK9 544 aa14.67□□□□□ -0.06
CCDC90B-207ENST00000526631 DCBLD2Q96PD2 775 aa14.67□□□□□ -0.06
CCDC90B-207ENST00000526631 FARP1Q9Y4F1 1045 aaPredicted RBP14.67□□□□□ -0.06
CCDC90B-207ENST00000526631 CLCN6P51797 869 aa14.65□□□□□ -0.06
CCDC90B-207ENST00000526631 POTEGQ6S5H5 508 aa14.61□□□□□ -0.07
CCDC90B-207ENST00000526631 URB2Q14146 1524 aaKnown RBP14.59□□□□□ -0.07
CCDC90B-207ENST00000526631 IFT140Q96RY7 1462 aa14.57□□□□□ -0.08
CCDC90B-207ENST00000526631 ZNF579Q8NAF0 562 aaKnown RBP14.55□□□□□ -0.08
CCDC90B-207ENST00000526631 DNMBPQ6XZF7 1577 aa14.52□□□□□ -0.08
CCDC90B-207ENST00000526631 TOPBP1Q92547 1522 aa14.52□□□□□ -0.08
CCDC90B-207ENST00000526631 GALR2O43603 387 aaPredicted RBP14.5□□□□□ -0.09
CCDC90B-207ENST00000526631 SUPT5HO00267 1087 aaKnown RBP14.49□□□□□ -0.09
CCDC90B-207ENST00000526631 ZRANB1Q9UGI0 708 aa14.43□□□□□ -0.1
CCDC90B-207ENST00000526631 WDR97A6NE52 1622 aa14.4□□□□□ -0.1
CCDC90B-207ENST00000526631 SOGA1O94964 1423 aa14.39□□□□□ -0.11
CCDC90B-207ENST00000526631 PCDH10Q9P2E7 1040 aa14.38□□□□□ -0.11
CCDC90B-207ENST00000526631 POLA1P09884 1462 aaPredicted RBP14.38□□□□□ -0.11
CCDC90B-207ENST00000526631 LCE2DQ5TA82 110 aaPredicted RBP14.36□□□□□ -0.11
CCDC90B-207ENST00000526631 PELP1Q8IZL8 1130 aaKnown RBP14.36□□□□□ -0.11
CCDC90B-207ENST00000526631 ZNF608Q9ULD9 1512 aaPredicted RBP14.36□□□□□ -0.11
CCDC90B-207ENST00000526631 TARBP1Q13395 1621 aaKnown RBP14.35□□□□□ -0.11
CCDC90B-207ENST00000526631 EIF4G3O43432 1585 aaKnown RBP14.34□□□□□ -0.11
CCDC90B-207ENST00000526631 POTEJP0CG39 1038 aa14.32□□□□□ -0.12
CCDC90B-207ENST00000526631 AQRO60306 1485 aaKnown RBP eCLIP14.31□□□□□ -0.12
CCDC90B-207ENST00000526631 FGD5Q6ZNL6 1462 aa14.31□□□□□ -0.12
CCDC90B-207ENST00000526631 TRIM41Q8WV44 630 aa14.28□□□□□ -0.12
CCDC90B-207ENST00000526631 CUX1P39880 1505 aa14.27□□□□□ -0.12
CCDC90B-207ENST00000526631 RAD54L2Q9Y4B4 1467 aa14.26□□□□□ -0.13
CCDC90B-207ENST00000526631 TDRD9Q8NDG6 1382 aaKnown RBP14.26□□□□□ -0.13
CCDC90B-207ENST00000526631 CHMP7Q8WUX9 453 aaPredicted RBP14.26□□□□□ -0.13
CCDC90B-207ENST00000526631 GRIN2BQ13224 1484 aa14.25□□□□□ -0.13
CCDC90B-207ENST00000526631 MAGI1Q96QZ7 1491 aaPredicted RBP14.25□□□□□ -0.13
CCDC90B-207ENST00000526631 CREBZFQ9NS37 354 aa14.25□□□□□ -0.13
CCDC90B-207ENST00000526631 WRNQ14191 1432 aaPredicted RBP eCLIP14.24□□□□□ -0.13
CCDC90B-207ENST00000526631 PHF12Q96QT6 1004 aa14.23□□□□□ -0.13
CCDC90B-207ENST00000526631 CHD1O14646 1710 aa14.22□□□□□ -0.13
CCDC90B-207ENST00000526631 ABCA10Q8WWZ4 1543 aa14.2□□□□□ -0.14
CCDC90B-207ENST00000526631 GAPVD1Q14C86 1478 aa14.2□□□□□ -0.14
CCDC90B-207ENST00000526631 SYNJ1O43426 1573 aa14.18□□□□□ -0.14
CCDC90B-207ENST00000526631 TOP2BQ02880 1626 aa14.18□□□□□ -0.14
CCDC90B-207ENST00000526631 SYNJ2O15056 1496 aa14.18□□□□□ -0.14
CCDC90B-207ENST00000526631 SNAPC4Q5SXM2 1469 aa14.18□□□□□ -0.14
CCDC90B-207ENST00000526631 RIMBP3CA6NJZ7 1639 aa14.16□□□□□ -0.14
CCDC90B-207ENST00000526631 RIMBP3BA6NNM3 1639 aa14.16□□□□□ -0.14
CCDC90B-207ENST00000526631 RIMBP3Q9UFD9 1639 aa14.16□□□□□ -0.14
CCDC90B-207ENST00000526631 BIVM-ERCC5R4GMW8 1640 aa14.16□□□□□ -0.14
CCDC90B-207ENST00000526631 ARHGEF11O15085 1522 aa14.15□□□□□ -0.14
CCDC90B-207ENST00000526631 PBRM1Q86U86 1689 aa14.14□□□□□ -0.15
CCDC90B-207ENST00000526631 METRNQ9UJH8 293 aa14.14□□□□□ -0.15
CCDC90B-207ENST00000526631 ABCA5Q8WWZ7 1642 aa14.12□□□□□ -0.15
CCDC90B-207ENST00000526631 CYB5RLQ6IPT4 315 aa14.1□□□□□ -0.15
CCDC90B-207ENST00000526631 ASTLQ6HA08 431 aaPredicted RBP14.09□□□□□ -0.15
CCDC90B-207ENST00000526631 FAM163AQ96GL9 167 aaPredicted RBP14.09□□□□□ -0.15
CCDC90B-207ENST00000526631 ERICH3Q5RHP9 1530 aa14.07□□□□□ -0.16
CCDC90B-207ENST00000526631 FHAD1B1AJZ9 1412 aa14.06□□□□□ -0.16
CCDC90B-207ENST00000526631 ATMINO43313 823 aaPredicted RBP14.05□□□□□ -0.16
CCDC90B-207ENST00000526631 CLASP1Q7Z460 1538 aa14.05□□□□□ -0.16
CCDC90B-207ENST00000526631 GRIN2AQ12879 1464 aa14.02□□□□□ -0.16
CCDC90B-207ENST00000526631 C7P10643 843 aa14.02□□□□□ -0.17
CCDC90B-207ENST00000526631 SLC39A7Q92504 469 aa14.01□□□□□ -0.17
CCDC90B-207ENST00000526631 MAMSTRQ6ZN01 415 aa14□□□□□ -0.17
CCDC90B-207ENST00000526631 MS4A3Q96HJ5 214 aa14□□□□□ -0.17
CCDC90B-207ENST00000526631 ADAMTS12P58397 1594 aa14□□□□□ -0.17
CCDC90B-207ENST00000526631 KIF27Q86VH2 1401 aa13.98□□□□□ -0.17
CCDC90B-207ENST00000526631 ARAP1Q96P48 1450 aa13.98□□□□□ -0.17
CCDC90B-207ENST00000526631 PAK3O75914 559 aaPredicted RBP13.97□□□□□ -0.17
CCDC90B-207ENST00000526631 NUP160Q12769 1436 aa13.96□□□□□ -0.18
CCDC90B-207ENST00000526631 MNX1P50219 401 aaPredicted RBP13.94□□□□□ -0.18
CCDC90B-207ENST00000526631 POTEFA5A3E0 1075 aa13.92□□□□□ -0.18
CCDC90B-207ENST00000526631 CUL7Q14999 1698 aa13.91□□□□□ -0.18
CCDC90B-207ENST00000526631 CEP170Q5SW79 1584 aa13.89□□□□□ -0.19
CCDC90B-207ENST00000526631 CDAN1Q8IWY9 1227 aa13.89□□□□□ -0.19
CCDC90B-207ENST00000526631 JPH4Q96JJ6 628 aa13.89□□□□□ -0.19
CCDC90B-207ENST00000526631 SCUBE2Q9NQ36 999 aa13.89□□□□□ -0.19
CCDC90B-207ENST00000526631 IGF1RP08069 1367 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 488.2 ms