RNA–Protein interactions for RNA: ENST00000525960.1

ARHGEF12-204, Transcript of Rho guanine nucleotide exchange factor 12, humanhuman

TSL 4

Gene ARHGEF12, Length 468 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF12-204ENST00000525960 GALR2O43603 387 aaPredicted RBP10.21□□□□□ -0.77
ARHGEF12-204ENST00000525960 CLCN6P51797 869 aa10.21□□□□□ -0.77
ARHGEF12-204ENST00000525960 POTEIP0CG38 1075 aa10.2□□□□□ -0.78
ARHGEF12-204ENST00000525960 KIF12Q96FN5 646 aa10.15□□□□□ -0.78
ARHGEF12-204ENST00000525960 KLHL34Q8N239 644 aa10.13□□□□□ -0.79
ARHGEF12-204ENST00000525960 MS4A3Q96HJ5 214 aa10.13□□□□□ -0.79
ARHGEF12-204ENST00000525960 MAP3K13O43283 966 aa10.1□□□□□ -0.79
ARHGEF12-204ENST00000525960 FAM212AQ96EL1 285 aa10.1□□□□□ -0.79
ARHGEF12-204ENST00000525960 TRPC6Q9Y210 931 aa10.07□□□□□ -0.8
ARHGEF12-204ENST00000525960 DCAF8Q5TAQ9 597 aa10.06□□□□□ -0.8
ARHGEF12-204ENST00000525960 SPOCK2Q92563 424 aa10.05□□□□□ -0.8
ARHGEF12-204ENST00000525960 DCBLD2Q96PD2 775 aa10.04□□□□□ -0.8
ARHGEF12-204ENST00000525960 PYGBP11216 843 aa10.02□□□□□ -0.81
ARHGEF12-204ENST00000525960 PELP1Q8IZL8 1130 aaKnown RBP10.02□□□□□ -0.81
ARHGEF12-204ENST00000525960 ASTLQ6HA08 431 aaPredicted RBP10.01□□□□□ -0.81
ARHGEF12-204ENST00000525960 SGIP1Q9BQI5 828 aa10.01□□□□□ -0.81
ARHGEF12-204ENST00000525960 IFNL1Q8IU54 200 aa10□□□□□ -0.81
ARHGEF12-204ENST00000525960 ATMINO43313 823 aaPredicted RBP9.99□□□□□ -0.81
ARHGEF12-204ENST00000525960 GSE1Q14687 1217 aa9.99□□□□□ -0.81
ARHGEF12-204ENST00000525960 PCDHB13Q9Y5F0 798 aa9.99□□□□□ -0.81
ARHGEF12-204ENST00000525960 BMP2KQ9NSY1 1161 aaPredicted RBP9.98□□□□□ -0.81
ARHGEF12-204ENST00000525960 CHRM1P11229 460 aaPredicted RBP9.95□□□□□ -0.82
ARHGEF12-204ENST00000525960 TIE1P35590 1138 aa9.95□□□□□ -0.82
ARHGEF12-204ENST00000525960 ATN1P54259 1190 aaPredicted RBP9.95□□□□□ -0.82
ARHGEF12-204ENST00000525960 TTLL13PA6NNM8 815 aa9.92□□□□□ -0.82
ARHGEF12-204ENST00000525960 CIZ1Q9ULV3 898 aaPredicted RBP9.92□□□□□ -0.82
ARHGEF12-204ENST00000525960 PCDHB8Q9UN66 801 aa9.92□□□□□ -0.82
ARHGEF12-204ENST00000525960 POTEB2H3BUK9 544 aa9.88□□□□□ -0.83
ARHGEF12-204ENST00000525960 LHX8Q68G74 356 aa9.88□□□□□ -0.83
ARHGEF12-204ENST00000525960 POTEFA5A3E0 1075 aa9.86□□□□□ -0.83
ARHGEF12-204ENST00000525960 SLC39A7Q92504 469 aa9.84□□□□□ -0.83
ARHGEF12-204ENST00000525960 TMEM106CQ9BVX2 250 aa9.84□□□□□ -0.83
ARHGEF12-204ENST00000525960 METRNQ9UJH8 293 aa9.84□□□□□ -0.83
ARHGEF12-204ENST00000525960 TRIM35Q9UPQ4 493 aa9.84□□□□□ -0.83
ARHGEF12-204ENST00000525960 C7P10643 843 aa9.83□□□□□ -0.84
ARHGEF12-204ENST00000525960 ZNF467Q7Z7K2 595 aaPredicted RBP9.83□□□□□ -0.84
ARHGEF12-204ENST00000525960 POTEJP0CG39 1038 aa9.8□□□□□ -0.84
ARHGEF12-204ENST00000525960 TRIM41Q8WV44 630 aa9.8□□□□□ -0.84
ARHGEF12-204ENST00000525960 RNF25Q96BH1 459 aaPredicted RBP9.8□□□□□ -0.84
ARHGEF12-204ENST00000525960 PKD2Q13563 968 aa9.78□□□□□ -0.84
ARHGEF12-204ENST00000525960 COLQQ9Y215 455 aaPredicted RBP9.78□□□□□ -0.84
ARHGEF12-204ENST00000525960 PSEN1P49768 467 aa9.76□□□□□ -0.85
ARHGEF12-204ENST00000525960 IER5LQ5T953 404 aa9.75□□□□□ -0.85
ARHGEF12-204ENST00000525960 PDAP1Q13442 181 aaKnown RBP9.74□□□□□ -0.85
ARHGEF12-204ENST00000525960 IRX5P78411 483 aaPredicted RBP9.73□□□□□ -0.85
ARHGEF12-204ENST00000525960 OTUD5Q96G74 571 aa9.73□□□□□ -0.85
ARHGEF12-204ENST00000525960 RIOK3O14730 519 aaKnown RBP9.69□□□□□ -0.86
ARHGEF12-204ENST00000525960 ECM2O94769 699 aaPredicted RBP9.68□□□□□ -0.86
ARHGEF12-204ENST00000525960 SEC24BO95487 1268 aa9.66□□□□□ -0.86
ARHGEF12-204ENST00000525960 ILDR1Q86SU0 546 aaPredicted RBP9.66□□□□□ -0.86
ARHGEF12-204ENST00000525960 RGL2O15211 777 aa9.65□□□□□ -0.86
ARHGEF12-204ENST00000525960 PDCD7Q8N8D1 485 aaKnown RBP9.65□□□□□ -0.86
ARHGEF12-204ENST00000525960 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.64□□□□□ -0.87
ARHGEF12-204ENST00000525960 ZFP91Q96JP5 570 aaPredicted RBP9.64□□□□□ -0.87
ARHGEF12-204ENST00000525960 OCEL1Q9H607 264 aa9.64□□□□□ -0.87
ARHGEF12-204ENST00000525960 CABP2Q9NPB3 220 aa9.64□□□□□ -0.87
ARHGEF12-204ENST00000525960 VGFO15240 615 aaPredicted RBP9.63□□□□□ -0.87
ARHGEF12-204ENST00000525960 PLCG2P16885 1265 aa9.61□□□□□ -0.87
ARHGEF12-204ENST00000525960 MKRN3Q13064 507 aaKnown RBP9.61□□□□□ -0.87
ARHGEF12-204ENST00000525960 EFCAB3Q8N7B9 438 aa9.6□□□□□ -0.87
ARHGEF12-204ENST00000525960 GOLGA2Q08379 1002 aa9.59□□□□□ -0.87
ARHGEF12-204ENST00000525960 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.57□□□□□ -0.882e-8■■□□□ 11.8
ARHGEF12-204ENST00000525960 DPY19L2Q6NUT2 758 aa9.56□□□□□ -0.88
ARHGEF12-204ENST00000525960 MAMSTRQ6ZN01 415 aa9.56□□□□□ -0.88
ARHGEF12-204ENST00000525960 BCL11BQ9C0K0 894 aaPredicted RBP9.54□□□□□ -0.88
ARHGEF12-204ENST00000525960 SCUBE2Q9NQ36 999 aa9.54□□□□□ -0.88
ARHGEF12-204ENST00000525960 MS4A4AQ96JQ5 239 aa9.51□□□□□ -0.89
ARHGEF12-204ENST00000525960 STK24Q9Y6E0 443 aa9.5□□□□□ -0.89
ARHGEF12-204ENST00000525960 STK25O00506 426 aa9.49□□□□□ -0.89
ARHGEF12-204ENST00000525960 SOX12O15370 315 aa9.49□□□□□ -0.89
ARHGEF12-204ENST00000525960 TAOK2Q9UL54 1235 aa9.49□□□□□ -0.89
ARHGEF12-204ENST00000525960 PHF8Q9UPP1 1060 aa9.49□□□□□ -0.89
ARHGEF12-204ENST00000525960 FBXO22Q8NEZ5 403 aa9.47□□□□□ -0.89
ARHGEF12-204ENST00000525960 L3MBTL3Q96JM7 780 aaPredicted RBP9.46□□□□□ -0.9
ARHGEF12-204ENST00000525960 MFRPQ9BY79 579 aa9.46□□□□□ -0.9
ARHGEF12-204ENST00000525960 LCE2DQ5TA82 110 aaPredicted RBP9.45□□□□□ -0.9
ARHGEF12-204ENST00000525960 SLAIN1Q8ND83 568 aa9.44□□□□□ -0.9
ARHGEF12-204ENST00000525960 TMEM121BQ9BXQ6 578 aaPredicted RBP9.44□□□□□ -0.9
ARHGEF12-204ENST00000525960 BOLA1Q9Y3E2 137 aa9.43□□□□□ -0.9
ARHGEF12-204ENST00000525960 HS6ST3Q8IZP7 471 aa9.42□□□□□ -0.9
ARHGEF12-204ENST00000525960 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.41□□□□□ -0.9
ARHGEF12-204ENST00000525960 NLRP6P59044 892 aa9.39□□□□□ -0.91
ARHGEF12-204ENST00000525960 MICALL2Q8IY33 904 aa9.38□□□□□ -0.91
ARHGEF12-204ENST00000525960 CHGAP10645 457 aaKnown RBP9.37□□□□□ -0.91
ARHGEF12-204ENST00000525960 C3orf67Q6ZVT6 689 aa9.37□□□□□ -0.91
ARHGEF12-204ENST00000525960 DNAJC5Q9H3Z4 198 aa9.37□□□□□ -0.91
ARHGEF12-204ENST00000525960 NKX1-1Q15270 411 aaPredicted RBP9.36□□□□□ -0.91
ARHGEF12-204ENST00000525960 TMEM92Q6UXU6 159 aa9.36□□□□□ -0.91
ARHGEF12-204ENST00000525960 FAM163AQ96GL9 167 aaPredicted RBP9.34□□□□□ -0.91
ARHGEF12-204ENST00000525960 PPP1R37O75864 691 aa9.33□□□□□ -0.92
ARHGEF12-204ENST00000525960 RTN4Q9NQC3 1192 aaKnown RBP9.33□□□□□ -0.92
ARHGEF12-204ENST00000525960 G3V3G9 751 aa9.3□□□□□ -0.92
ARHGEF12-204ENST00000525960 ST18O60284 1047 aa9.3□□□□□ -0.92
ARHGEF12-204ENST00000525960 POTEMA6NI47 508 aa9.28□□□□□ -0.92
ARHGEF12-204ENST00000525960 AMER1Q5JTC6 1135 aaPredicted RBP9.28□□□□□ -0.92
ARHGEF12-204ENST00000525960 HOXB3P14651 431 aaPredicted RBP9.27□□□□□ -0.93
ARHGEF12-204ENST00000525960 POTEGQ6S5H5 508 aa9.27□□□□□ -0.93
ARHGEF12-204ENST00000525960 KIF3CO14782 793 aa9.24□□□□□ -0.93
ARHGEF12-204ENST00000525960 SNPHO15079 494 aa9.23□□□□□ -0.93
ARHGEF12-204ENST00000525960 GTPBP6O43824 516 aaPredicted RBP9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 133.3 ms