RNA–Protein interactions for RNA: ENST00000525960.1

ARHGEF12-204, Transcript of Rho guanine nucleotide exchange factor 12, humanhuman

TSL 4

Gene ARHGEF12, Length 468 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF12-204ENST00000525960 AEBP2Q6ZN18 517 aaPredicted RBP20.47■□□□□ 0.87
ARHGEF12-204ENST00000525960 CHIC1Q5VXU3 224 aa19.67■□□□□ 0.74
ARHGEF12-204ENST00000525960 PHF23Q9BUL5 403 aaPredicted RBP17.33■□□□□ 0.36
ARHGEF12-204ENST00000525960 SENP3Q9H4L4 574 aaPredicted RBP17.29■□□□□ 0.36
ARHGEF12-204ENST00000525960 FOXD1Q16676 465 aa16.17■□□□□ 0.18
ARHGEF12-204ENST00000525960 PLPPR3Q6T4P5 718 aa15.79■□□□□ 0.12
ARHGEF12-204ENST00000525960 PPP6R1Q9UPN7 881 aa15.39■□□□□ 0.05
ARHGEF12-204ENST00000525960 ADRA2BP18089 450 aa15.31■□□□□ 0.04
ARHGEF12-204ENST00000525960 PIAS4Q8N2W9 510 aaPredicted RBP15.1■□□□□ 0.01
ARHGEF12-204ENST00000525960 MSH5O43196 834 aa14.91□□□□□ -0.02
ARHGEF12-204ENST00000525960 POTEDQ86YR6 584 aa14.14□□□□□ -0.15
ARHGEF12-204ENST00000525960 MAPK8IP2Q13387 824 aaPredicted RBP13.99□□□□□ -0.17
ARHGEF12-204ENST00000525960 PPP4R3CPQ6ZMV5 832 aa13.91□□□□□ -0.18
ARHGEF12-204ENST00000525960 SCAF1Q9H7N4 1312 aaKnown RBP13.87□□□□□ -0.19
ARHGEF12-204ENST00000525960 DMRT2Q9Y5R5 561 aa13.8□□□□□ -0.2
ARHGEF12-204ENST00000525960 CNKSR2Q8WXI2 1034 aa13.56□□□□□ -0.24
ARHGEF12-204ENST00000525960 HOXD11P31277 338 aaPredicted RBP13.43□□□□□ -0.26
ARHGEF12-204ENST00000525960 NCBP3Q53F19 620 aaKnown RBP13.37□□□□□ -0.27
ARHGEF12-204ENST00000525960 RNF216Q9NWF9 866 aaPredicted RBP13.37□□□□□ -0.27
ARHGEF12-204ENST00000525960 KCNA4P22459 653 aa13.32□□□□□ -0.28
ARHGEF12-204ENST00000525960 NPM3O75607 178 aaKnown RBP13.3□□□□□ -0.28
ARHGEF12-204ENST00000525960 DCAF8L1A6NGE4 600 aa13.12□□□□□ -0.31
ARHGEF12-204ENST00000525960 DNAJC5BQ9UF47 199 aa12.98□□□□□ -0.33
ARHGEF12-204ENST00000525960 RNF39Q9H2S5 420 aa12.82□□□□□ -0.36
ARHGEF12-204ENST00000525960 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.69□□□□□ -0.382e-6■□□□□ 10.6
ARHGEF12-204ENST00000525960 SLC4A2P04920 1241 aa12.66□□□□□ -0.38
ARHGEF12-204ENST00000525960 CACNB1Q02641 598 aaPredicted RBP12.6□□□□□ -0.39
ARHGEF12-204ENST00000525960 C1QBPQ07021 282 aaKnown RBP12.6□□□□□ -0.39
ARHGEF12-204ENST00000525960 SLC4A1APQ9BWU0 796 aaKnown RBP12.56□□□□□ -0.4
ARHGEF12-204ENST00000525960 U3KPZ7 1027 aaPredicted RBP12.56□□□□□ -0.4
ARHGEF12-204ENST00000525960 ZBTB22O15209 634 aa12.3□□□□□ -0.44
ARHGEF12-204ENST00000525960 SPINK5Q9NQ38 1064 aaPredicted RBP12.29□□□□□ -0.44
ARHGEF12-204ENST00000525960 FOXD4L1Q9NU39 408 aa12.27□□□□□ -0.45
ARHGEF12-204ENST00000525960 MYCNP04198 464 aaPredicted RBP12.23□□□□□ -0.45
ARHGEF12-204ENST00000525960 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.17□□□□□ -0.46
ARHGEF12-204ENST00000525960 HNRNPUL2Q1KMD3 747 aaKnown RBP12.17□□□□□ -0.46
ARHGEF12-204ENST00000525960 CAPN15O75808 1086 aa12.16□□□□□ -0.46
ARHGEF12-204ENST00000525960 SAMD1Q6SPF0 538 aaPredicted RBP12.15□□□□□ -0.46
ARHGEF12-204ENST00000525960 DSG3P32926 999 aa12.11□□□□□ -0.47
ARHGEF12-204ENST00000525960 APLP2Q06481 763 aa12.07□□□□□ -0.48
ARHGEF12-204ENST00000525960 TRHP20396 242 aaPredicted RBP12.05□□□□□ -0.48
ARHGEF12-204ENST00000525960 ATF5Q9Y2D1 282 aaPredicted RBP12.04□□□□□ -0.48
ARHGEF12-204ENST00000525960 ZNF219Q9P2Y4 722 aaPredicted RBP12.02□□□□□ -0.49
ARHGEF12-204ENST00000525960 CSRNP3Q8WYN3 585 aa11.97□□□□□ -0.49
ARHGEF12-204ENST00000525960 ABCB7O75027 752 aa11.95□□□□□ -0.5
ARHGEF12-204ENST00000525960 EHMT2Q96KQ7 1210 aa11.89□□□□□ -0.51
ARHGEF12-204ENST00000525960 ATXN8OSP0DMR3 200 aa11.86□□□□□ -0.51
ARHGEF12-204ENST00000525960 POLA2Q14181 598 aa11.83□□□□□ -0.52
ARHGEF12-204ENST00000525960 ZBTB12Q9Y330 459 aaPredicted RBP11.53□□□□□ -0.56
ARHGEF12-204ENST00000525960 MKRN4PQ13434 485 aaPredicted RBP11.49□□□□□ -0.57
ARHGEF12-204ENST00000525960 OSCARQ8IYS5 282 aa11.44□□□□□ -0.58
ARHGEF12-204ENST00000525960 RBM42Q9BTD8 480 aaKnown RBP11.44□□□□□ -0.58
ARHGEF12-204ENST00000525960 FBLN2P98095 1184 aa11.38□□□□□ -0.59
ARHGEF12-204ENST00000525960 AKT1S1Q96B36 256 aa11.29□□□□□ -0.6
ARHGEF12-204ENST00000525960 SPDYE2BA6NHP3 402 aa11.25□□□□□ -0.61
ARHGEF12-204ENST00000525960 SPDYE6P0CI01 402 aa11.25□□□□□ -0.61
ARHGEF12-204ENST00000525960 SPDYE2Q495Y8 402 aa11.25□□□□□ -0.61
ARHGEF12-204ENST00000525960 REM2Q8IYK8 340 aaPredicted RBP11.21□□□□□ -0.61
ARHGEF12-204ENST00000525960 SSUH2Q9Y2M2 353 aa11.2□□□□□ -0.62
ARHGEF12-204ENST00000525960 ZNF692Q9BU19 519 aaPredicted RBP11.16□□□□□ -0.62
ARHGEF12-204ENST00000525960 CHRDL2Q6WN34 429 aa11.13□□□□□ -0.63
ARHGEF12-204ENST00000525960 PITPNM1O00562 1244 aa11.1□□□□□ -0.63
ARHGEF12-204ENST00000525960 POTEHQ6S545 545 aa11.1□□□□□ -0.63
ARHGEF12-204ENST00000525960 PABPN1Q86U42 306 aaKnown RBP eCLIP11.03□□□□□ -0.64
ARHGEF12-204ENST00000525960 SPDYE4A6NLX3 237 aa11□□□□□ -0.65
ARHGEF12-204ENST00000525960 FXR2P51116 673 aaKnown RBP eCLIP10.96□□□□□ -0.653e-7■□□□□ 9.3
ARHGEF12-204ENST00000525960 PIP4P2Q8N4L2 257 aa10.96□□□□□ -0.65
ARHGEF12-204ENST00000525960 SPDYE1Q8NFV5 336 aaPredicted RBP10.96□□□□□ -0.65
ARHGEF12-204ENST00000525960 CLEC11AQ9Y240 323 aa10.93□□□□□ -0.66
ARHGEF12-204ENST00000525960 PROM2Q8N271 834 aa10.88□□□□□ -0.67
ARHGEF12-204ENST00000525960 PRR29P0C7W0 189 aa10.79□□□□□ -0.68
ARHGEF12-204ENST00000525960 PRKAR2AP13861 404 aaKnown RBP10.78□□□□□ -0.68
ARHGEF12-204ENST00000525960 FKBP8Q14318 412 aa10.76□□□□□ -0.69
ARHGEF12-204ENST00000525960 CHADLQ6NUI6 762 aa10.76□□□□□ -0.69
ARHGEF12-204ENST00000525960 STAG3Q9UJ98 1225 aa10.73□□□□□ -0.69
ARHGEF12-204ENST00000525960 CREBZFQ9NS37 354 aa10.68□□□□□ -0.7
ARHGEF12-204ENST00000525960 EVX2Q03828 476 aa10.65□□□□□ -0.7
ARHGEF12-204ENST00000525960 HAX1O00165 279 aa10.61□□□□□ -0.71
ARHGEF12-204ENST00000525960 FARP1Q9Y4F1 1045 aaPredicted RBP10.6□□□□□ -0.71
ARHGEF12-204ENST00000525960 C19orf67A6NJJ6 358 aa10.59□□□□□ -0.71
ARHGEF12-204ENST00000525960 MNX1P50219 401 aaPredicted RBP10.59□□□□□ -0.71
ARHGEF12-204ENST00000525960 SP7Q8TDD2 431 aaPredicted RBP10.54□□□□□ -0.72
ARHGEF12-204ENST00000525960 CD44P16070 742 aaKnown RBP10.44□□□□□ -0.74
ARHGEF12-204ENST00000525960 MIER1Q8N108 512 aa10.43□□□□□ -0.74
ARHGEF12-204ENST00000525960 FBXO3Q9UK99 471 aa10.39□□□□□ -0.75
ARHGEF12-204ENST00000525960 NPM1P06748 294 aaKnown RBP eCLIP10.37□□□□□ -0.75
ARHGEF12-204ENST00000525960 GABBR2O75899 941 aa10.35□□□□□ -0.75
ARHGEF12-204ENST00000525960 PLCD3Q8N3E9 789 aa10.35□□□□□ -0.75
ARHGEF12-204ENST00000525960 ZRANB1Q9UGI0 708 aa10.34□□□□□ -0.75
ARHGEF12-204ENST00000525960 VASPP50552 380 aaPredicted RBP10.32□□□□□ -0.76
ARHGEF12-204ENST00000525960 ZNF579Q8NAF0 562 aaKnown RBP10.32□□□□□ -0.76
ARHGEF12-204ENST00000525960 PLEKHG5O94827 1062 aa10.3□□□□□ -0.76
ARHGEF12-204ENST00000525960 RASEFQ8IZ41 740 aa10.29□□□□□ -0.76
ARHGEF12-204ENST00000525960 NUBP1P53384 320 aa10.28□□□□□ -0.76
ARHGEF12-204ENST00000525960 PHF12Q96QT6 1004 aa10.25□□□□□ -0.77
ARHGEF12-204ENST00000525960 TSPYL2Q9H2G4 693 aaPredicted RBP10.25□□□□□ -0.77
ARHGEF12-204ENST00000525960 CCDC61Q9Y6R9 512 aa10.25□□□□□ -0.77
ARHGEF12-204ENST00000525960 PAK3O75914 559 aaPredicted RBP10.23□□□□□ -0.77
ARHGEF12-204ENST00000525960 ZBTB47Q9UFB7 747 aaPredicted RBP10.23□□□□□ -0.77
ARHGEF12-204ENST00000525960 IFNLR1Q8IU57 520 aaPredicted RBP10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms