RNA–Protein interactions for RNA: ENST00000524047.5

LINCR-0001-203, humanhuman

TSL 4 BASIC

Gene LINCR-0001, Length 545 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCR-0001-203ENST00000524047 FBXO3Q9UK99 471 aa10.43□□□□□ -0.74
LINCR-0001-203ENST00000524047 RASEFQ8IZ41 740 aa10.41□□□□□ -0.74
LINCR-0001-203ENST00000524047 MS4A3Q96HJ5 214 aa10.39□□□□□ -0.75
LINCR-0001-203ENST00000524047 KIF12Q96FN5 646 aa10.37□□□□□ -0.75
LINCR-0001-203ENST00000524047 NUBP1P53384 320 aa10.36□□□□□ -0.75
LINCR-0001-203ENST00000524047 ASTLQ6HA08 431 aaPredicted RBP10.33□□□□□ -0.76
LINCR-0001-203ENST00000524047 MAP3K13O43283 966 aa10.3□□□□□ -0.76
LINCR-0001-203ENST00000524047 ATMINO43313 823 aaPredicted RBP10.3□□□□□ -0.76
LINCR-0001-203ENST00000524047 PELP1Q8IZL8 1130 aaKnown RBP10.29□□□□□ -0.76
LINCR-0001-203ENST00000524047 FAM212AQ96EL1 285 aa10.28□□□□□ -0.76
LINCR-0001-203ENST00000524047 VASPP50552 380 aaPredicted RBP10.27□□□□□ -0.77
LINCR-0001-203ENST00000524047 SGIP1Q9BQI5 828 aa10.27□□□□□ -0.77
LINCR-0001-203ENST00000524047 C7P10643 843 aa10.23□□□□□ -0.77
LINCR-0001-203ENST00000524047 TIE1P35590 1138 aa10.23□□□□□ -0.77
LINCR-0001-203ENST00000524047 SLC39A7Q92504 469 aa10.23□□□□□ -0.77
LINCR-0001-203ENST00000524047 ATN1P54259 1190 aaPredicted RBP10.22□□□□□ -0.77
LINCR-0001-203ENST00000524047 BMP2KQ9NSY1 1161 aaPredicted RBP10.22□□□□□ -0.77
LINCR-0001-203ENST00000524047 TRPC6Q9Y210 931 aa10.22□□□□□ -0.77
LINCR-0001-203ENST00000524047 METRNQ9UJH8 293 aa10.21□□□□□ -0.77
LINCR-0001-203ENST00000524047 PCDHB13Q9Y5F0 798 aa10.21□□□□□ -0.77
LINCR-0001-203ENST00000524047 POTEB2H3BUK9 544 aa10.2□□□□□ -0.78
LINCR-0001-203ENST00000524047 DCAF8Q5TAQ9 597 aa10.19□□□□□ -0.78
LINCR-0001-203ENST00000524047 KLHL34Q8N239 644 aa10.18□□□□□ -0.78
LINCR-0001-203ENST00000524047 TTLL13PA6NNM8 815 aa10.16□□□□□ -0.78
LINCR-0001-203ENST00000524047 IFNL1Q8IU54 200 aa10.16□□□□□ -0.78
LINCR-0001-203ENST00000524047 OTUD5Q96G74 571 aa10.15□□□□□ -0.78
LINCR-0001-203ENST00000524047 GSE1Q14687 1217 aa10.13□□□□□ -0.79
LINCR-0001-203ENST00000524047 PYGBP11216 843 aa10.12□□□□□ -0.79
LINCR-0001-203ENST00000524047 IFNLR1Q8IU57 520 aaPredicted RBP10.1□□□□□ -0.79
LINCR-0001-203ENST00000524047 POTEFA5A3E0 1075 aa10.08□□□□□ -0.8
LINCR-0001-203ENST00000524047 POTEJP0CG39 1038 aa10.08□□□□□ -0.8
LINCR-0001-203ENST00000524047 IER5LQ5T953 404 aa10.08□□□□□ -0.8
LINCR-0001-203ENST00000524047 TRIM35Q9UPQ4 493 aa10.08□□□□□ -0.8
LINCR-0001-203ENST00000524047 CHRM1P11229 460 aaPredicted RBP10.06□□□□□ -0.8
LINCR-0001-203ENST00000524047 MAMSTRQ6ZN01 415 aa10.06□□□□□ -0.8
LINCR-0001-203ENST00000524047 SPOCK2Q92563 424 aa10.06□□□□□ -0.8
LINCR-0001-203ENST00000524047 TMEM106CQ9BVX2 250 aa10.06□□□□□ -0.8
LINCR-0001-203ENST00000524047 SEC24BO95487 1268 aa10.03□□□□□ -0.8
LINCR-0001-203ENST00000524047 PCDHB8Q9UN66 801 aa10.03□□□□□ -0.8
LINCR-0001-203ENST00000524047 COLQQ9Y215 455 aaPredicted RBP10.03□□□□□ -0.8
LINCR-0001-203ENST00000524047 ZNF467Q7Z7K2 595 aaPredicted RBP10.01□□□□□ -0.81
LINCR-0001-203ENST00000524047 SCUBE2Q9NQ36 999 aa9.99□□□□□ -0.81
LINCR-0001-203ENST00000524047 CIZ1Q9ULV3 898 aaPredicted RBP9.96□□□□□ -0.82
LINCR-0001-203ENST00000524047 IRX5P78411 483 aaPredicted RBP9.95□□□□□ -0.82
LINCR-0001-203ENST00000524047 PLCG2P16885 1265 aa9.93□□□□□ -0.82
LINCR-0001-203ENST00000524047 OCEL1Q9H607 264 aa9.91□□□□□ -0.82
LINCR-0001-203ENST00000524047 PSEN1P49768 467 aa9.9□□□□□ -0.82
LINCR-0001-203ENST00000524047 TRIM41Q8WV44 630 aa9.89□□□□□ -0.83
LINCR-0001-203ENST00000524047 PDAP1Q13442 181 aaKnown RBP9.88□□□□□ -0.83
LINCR-0001-203ENST00000524047 GOLGA2Q08379 1002 aa9.86□□□□□ -0.83
LINCR-0001-203ENST00000524047 MKRN3Q13064 507 aaKnown RBP9.84□□□□□ -0.83
LINCR-0001-203ENST00000524047 PDCD7Q8N8D1 485 aaKnown RBP9.82□□□□□ -0.84
LINCR-0001-203ENST00000524047 POTEMA6NI47 508 aa9.81□□□□□ -0.84
LINCR-0001-203ENST00000524047 LCE2DQ5TA82 110 aaPredicted RBP9.8□□□□□ -0.84
LINCR-0001-203ENST00000524047 POTEGQ6S5H5 508 aa9.79□□□□□ -0.84
LINCR-0001-203ENST00000524047 ILDR1Q86SU0 546 aaPredicted RBP9.79□□□□□ -0.84
LINCR-0001-203ENST00000524047 SLAIN1Q8ND83 568 aa9.79□□□□□ -0.84
LINCR-0001-203ENST00000524047 FAM163AQ96GL9 167 aaPredicted RBP9.78□□□□□ -0.84
LINCR-0001-203ENST00000524047 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.78□□□□□ -0.84
LINCR-0001-203ENST00000524047 CABP2Q9NPB3 220 aa9.77□□□□□ -0.85
LINCR-0001-203ENST00000524047 L3MBTL3Q96JM7 780 aaPredicted RBP9.76□□□□□ -0.85
LINCR-0001-203ENST00000524047 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.75□□□□□ -0.85
LINCR-0001-203ENST00000524047 RIOK3O14730 519 aaKnown RBP9.73□□□□□ -0.85
LINCR-0001-203ENST00000524047 RNF25Q96BH1 459 aaPredicted RBP9.72□□□□□ -0.85
LINCR-0001-203ENST00000524047 PCDH10Q9P2E7 1040 aa9.7□□□□□ -0.86
LINCR-0001-203ENST00000524047 C3orf67Q6ZVT6 689 aa9.69□□□□□ -0.86
LINCR-0001-203ENST00000524047 VGFO15240 615 aaPredicted RBP9.68□□□□□ -0.86
LINCR-0001-203ENST00000524047 DPY19L2Q6NUT2 758 aa9.67□□□□□ -0.86
LINCR-0001-203ENST00000524047 EFCAB3Q8N7B9 438 aa9.67□□□□□ -0.86
LINCR-0001-203ENST00000524047 SNPHO15079 494 aa9.66□□□□□ -0.86
LINCR-0001-203ENST00000524047 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.65□□□□□ -0.86
LINCR-0001-203ENST00000524047 ST18O60284 1047 aa9.65□□□□□ -0.86
LINCR-0001-203ENST00000524047 ZFP91Q96JP5 570 aaPredicted RBP9.65□□□□□ -0.86
LINCR-0001-203ENST00000524047 BOLA1Q9Y3E2 137 aa9.64□□□□□ -0.87
LINCR-0001-203ENST00000524047 TAOK2Q9UL54 1235 aa9.63□□□□□ -0.87
LINCR-0001-203ENST00000524047 G3V3G9 751 aa9.62□□□□□ -0.87
LINCR-0001-203ENST00000524047 SOX12O15370 315 aa9.62□□□□□ -0.87
LINCR-0001-203ENST00000524047 TMEM121BQ9BXQ6 578 aaPredicted RBP9.61□□□□□ -0.87
LINCR-0001-203ENST00000524047 PLSCR2Q9NRY7 297 aa9.61□□□□□ -0.87
LINCR-0001-203ENST00000524047 ECM2O94769 699 aaPredicted RBP9.59□□□□□ -0.87
LINCR-0001-203ENST00000524047 PKD2Q13563 968 aa9.58□□□□□ -0.88
LINCR-0001-203ENST00000524047 BCL11BQ9C0K0 894 aaPredicted RBP9.55□□□□□ -0.88
LINCR-0001-203ENST00000524047 MS4A4AQ96JQ5 239 aa9.54□□□□□ -0.88
LINCR-0001-203ENST00000524047 PHF8Q9UPP1 1060 aa9.54□□□□□ -0.88
LINCR-0001-203ENST00000524047 CDAN1Q8IWY9 1227 aa9.53□□□□□ -0.88
LINCR-0001-203ENST00000524047 MICALL2Q8IY33 904 aa9.52□□□□□ -0.89
LINCR-0001-203ENST00000524047 STK24Q9Y6E0 443 aa9.52□□□□□ -0.89
LINCR-0001-203ENST00000524047 RGL2O15211 777 aa9.51□□□□□ -0.89
LINCR-0001-203ENST00000524047 NLRP6P59044 892 aa9.51□□□□□ -0.89
LINCR-0001-203ENST00000524047 STK25O00506 426 aa9.5□□□□□ -0.89
LINCR-0001-203ENST00000524047 FBXO22Q8NEZ5 403 aa9.49□□□□□ -0.89
LINCR-0001-203ENST00000524047 MARVELD3Q96A59 401 aa9.48□□□□□ -0.89
LINCR-0001-203ENST00000524047 HOXB3P14651 431 aaPredicted RBP9.47□□□□□ -0.89
LINCR-0001-203ENST00000524047 MFRPQ9BY79 579 aa9.46□□□□□ -0.9
LINCR-0001-203ENST00000524047 TMEM92Q6UXU6 159 aa9.45□□□□□ -0.9
LINCR-0001-203ENST00000524047 EMP3P54852 163 aa9.44□□□□□ -0.9
LINCR-0001-203ENST00000524047 DOK7Q18PE1 504 aa9.44□□□□□ -0.9
LINCR-0001-203ENST00000524047 ZNF710Q8N1W2 664 aa9.41□□□□□ -0.9
LINCR-0001-203ENST00000524047 HOXB1P14653 301 aaPredicted RBP9.4□□□□□ -0.9
LINCR-0001-203ENST00000524047 RIMBP2O15034 1052 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms