RNA–Protein interactions for RNA: ENST00000523805.5

PTK2-253, Transcript of protein tyrosine kinase 2, humanhuman

TSL 3

Gene PTK2, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK2-253ENST00000523805 CHADLQ6NUI6 762 aa15.41■□□□□ 0.06
PTK2-253ENST00000523805 CUX2O14529 1486 aa15.4■□□□□ 0.06
PTK2-253ENST00000523805 C19orf67A6NJJ6 358 aa15.39■□□□□ 0.05
PTK2-253ENST00000523805 WIZO95785 1651 aa15.36■□□□□ 0.05
PTK2-253ENST00000523805 KIF21AQ7Z4S6 1674 aa15.36■□□□□ 0.05
PTK2-253ENST00000523805 SPDYE4A6NLX3 237 aa15.33■□□□□ 0.04
PTK2-253ENST00000523805 THOC2Q8NI27 1593 aaKnown RBP15.32■□□□□ 0.04
PTK2-253ENST00000523805 LAMC3Q9Y6N6 1575 aa15.31■□□□□ 0.04
PTK2-253ENST00000523805 DNAJC5Q9H3Z4 198 aa15.29■□□□□ 0.04
PTK2-253ENST00000523805 STAG3Q9UJ98 1225 aa15.23■□□□□ 0.03
PTK2-253ENST00000523805 FARP1Q9Y4F1 1045 aaPredicted RBP15.22■□□□□ 0.03
PTK2-253ENST00000523805 PDS5BQ9NTI5 1447 aa15.17■□□□□ 0.02
PTK2-253ENST00000523805 CREBZFQ9NS37 354 aa15.14■□□□□ 0.01
PTK2-253ENST00000523805 CADPSQ9ULU8 1353 aa15.12■□□□□ 0.01
PTK2-253ENST00000523805 GABBR2O75899 941 aa15.11■□□□□ 0.01
PTK2-253ENST00000523805 CD44P16070 742 aaKnown RBP15.1■□□□□ 0.01
PTK2-253ENST00000523805 RSF1Q96T23 1441 aaPredicted RBP15.09■□□□□ 0.01
PTK2-253ENST00000523805 MRC2Q9UBG0 1479 aa15.09■□□□□ 0.01
PTK2-253ENST00000523805 TOP2AP11388 1531 aaKnown RBP15.09■□□□□ 0.01
PTK2-253ENST00000523805 PROM2Q8N271 834 aa15.09■□□□□ 0.01
PTK2-253ENST00000523805 CEP164Q9UPV0 1460 aa15.06■□□□□ 0
PTK2-253ENST00000523805 WDR62O43379 1518 aa15.06■□□□□ 0
PTK2-253ENST00000523805 FANCD2Q9BXW9 1451 aa15.03■□□□□ -0
PTK2-253ENST00000523805 PRDM2Q13029 1718 aa15.03■□□□□ -0
PTK2-253ENST00000523805 CFTRP13569 1480 aa14.97□□□□□ -0.01
PTK2-253ENST00000523805 ZNF579Q8NAF0 562 aaKnown RBP14.93□□□□□ -0.02
PTK2-253ENST00000523805 MNX1P50219 401 aaPredicted RBP14.92□□□□□ -0.02
PTK2-253ENST00000523805 CLCN6P51797 869 aa14.92□□□□□ -0.02
PTK2-253ENST00000523805 URB2Q14146 1524 aaKnown RBP14.92□□□□□ -0.02
PTK2-253ENST00000523805 CCDC88BA6NC98 1476 aa14.89□□□□□ -0.03
PTK2-253ENST00000523805 ZRANB1Q9UGI0 708 aa14.87□□□□□ -0.03
PTK2-253ENST00000523805 NPM1P06748 294 aaKnown RBP eCLIP14.82□□□□□ -0.04
PTK2-253ENST00000523805 POTEIP0CG38 1075 aa14.82□□□□□ -0.04
PTK2-253ENST00000523805 TRIM41Q8WV44 630 aa14.8□□□□□ -0.04
PTK2-253ENST00000523805 PAK3O75914 559 aaPredicted RBP14.76□□□□□ -0.05
PTK2-253ENST00000523805 TOPBP1Q92547 1522 aa14.76□□□□□ -0.05
PTK2-253ENST00000523805 ZNF608Q9ULD9 1512 aaPredicted RBP14.74□□□□□ -0.05
PTK2-253ENST00000523805 DNMBPQ6XZF7 1577 aa14.73□□□□□ -0.05
PTK2-253ENST00000523805 EIF4G3O43432 1585 aaKnown RBP14.72□□□□□ -0.05
PTK2-253ENST00000523805 IFT140Q96RY7 1462 aa14.7□□□□□ -0.06
PTK2-253ENST00000523805 GALR2O43603 387 aaPredicted RBP14.7□□□□□ -0.06
PTK2-253ENST00000523805 PHF12Q96QT6 1004 aa14.7□□□□□ -0.06
PTK2-253ENST00000523805 LHX8Q68G74 356 aa14.68□□□□□ -0.06
PTK2-253ENST00000523805 DCBLD2Q96PD2 775 aa14.67□□□□□ -0.06
PTK2-253ENST00000523805 CHD1O14646 1710 aa14.66□□□□□ -0.06
PTK2-253ENST00000523805 ABCC8Q09428 1581 aa14.64□□□□□ -0.07
PTK2-253ENST00000523805 TARBP1Q13395 1621 aaKnown RBP14.63□□□□□ -0.07
PTK2-253ENST00000523805 RIMBP3CA6NJZ7 1639 aa14.63□□□□□ -0.07
PTK2-253ENST00000523805 RIMBP3BA6NNM3 1639 aa14.63□□□□□ -0.07
PTK2-253ENST00000523805 RIMBP3Q9UFD9 1639 aa14.63□□□□□ -0.07
PTK2-253ENST00000523805 POLA1P09884 1462 aaPredicted RBP14.61□□□□□ -0.07
PTK2-253ENST00000523805 FKBP8Q14318 412 aa14.6□□□□□ -0.07
PTK2-253ENST00000523805 AQRO60306 1485 aaKnown RBP eCLIP14.59□□□□□ -0.077e-9■■■■□ 20.6
PTK2-253ENST00000523805 RAD54L2Q9Y4B4 1467 aa14.58□□□□□ -0.08
PTK2-253ENST00000523805 MIER1Q8N108 512 aa14.57□□□□□ -0.08
PTK2-253ENST00000523805 SUPT5HO00267 1087 aaKnown RBP14.56□□□□□ -0.08
PTK2-253ENST00000523805 PLEKHG5O94827 1062 aa14.56□□□□□ -0.08
PTK2-253ENST00000523805 CCDC61Q9Y6R9 512 aa14.55□□□□□ -0.08
PTK2-253ENST00000523805 FGD5Q6ZNL6 1462 aa14.55□□□□□ -0.08
PTK2-253ENST00000523805 ARHGEF11O15085 1522 aa14.53□□□□□ -0.08
PTK2-253ENST00000523805 CUX1P39880 1505 aa14.53□□□□□ -0.08
PTK2-253ENST00000523805 TSPYL2Q9H2G4 693 aaPredicted RBP14.53□□□□□ -0.08
PTK2-253ENST00000523805 MS4A3Q96HJ5 214 aa14.52□□□□□ -0.09
PTK2-253ENST00000523805 SOGA1O94964 1423 aa14.5□□□□□ -0.09
PTK2-253ENST00000523805 TDRD9Q8NDG6 1382 aaKnown RBP14.5□□□□□ -0.09
PTK2-253ENST00000523805 WDR97A6NE52 1622 aa14.5□□□□□ -0.09
PTK2-253ENST00000523805 PBRM1Q86U86 1689 aa14.49□□□□□ -0.09
PTK2-253ENST00000523805 SNAPC4Q5SXM2 1469 aa14.47□□□□□ -0.09
PTK2-253ENST00000523805 RASEFQ8IZ41 740 aa14.47□□□□□ -0.09
PTK2-253ENST00000523805 PLCD3Q8N3E9 789 aa14.47□□□□□ -0.09
PTK2-253ENST00000523805 ASTLQ6HA08 431 aaPredicted RBP14.44□□□□□ -0.1
PTK2-253ENST00000523805 KIF12Q96FN5 646 aa14.43□□□□□ -0.1
PTK2-253ENST00000523805 PELP1Q8IZL8 1130 aaKnown RBP14.41□□□□□ -0.1
PTK2-253ENST00000523805 ZBTB47Q9UFB7 747 aaPredicted RBP14.41□□□□□ -0.1
PTK2-253ENST00000523805 CYB5RLQ6IPT4 315 aa14.39□□□□□ -0.11
PTK2-253ENST00000523805 SYNJ1O43426 1573 aa14.39□□□□□ -0.11
PTK2-253ENST00000523805 GRIN2BQ13224 1484 aa14.38□□□□□ -0.11
PTK2-253ENST00000523805 ARAP1Q96P48 1450 aa14.38□□□□□ -0.11
PTK2-253ENST00000523805 ATMINO43313 823 aaPredicted RBP14.38□□□□□ -0.11
PTK2-253ENST00000523805 MAGI1Q96QZ7 1491 aaPredicted RBP14.38□□□□□ -0.11
PTK2-253ENST00000523805 ABCA5Q8WWZ7 1642 aa14.37□□□□□ -0.11
PTK2-253ENST00000523805 NUBP1P53384 320 aa14.37□□□□□ -0.11
PTK2-253ENST00000523805 CLASP1Q7Z460 1538 aa14.36□□□□□ -0.11
PTK2-253ENST00000523805 CHMP7Q8WUX9 453 aaPredicted RBP14.35□□□□□ -0.11
PTK2-253ENST00000523805 GAPVD1Q14C86 1478 aa14.35□□□□□ -0.11
PTK2-253ENST00000523805 BIVM-ERCC5R4GMW8 1640 aa14.33□□□□□ -0.11
PTK2-253ENST00000523805 SYNJ2O15056 1496 aa14.33□□□□□ -0.12
PTK2-253ENST00000523805 ABCA10Q8WWZ4 1543 aa14.32□□□□□ -0.12
PTK2-253ENST00000523805 POTEB2H3BUK9 544 aa14.32□□□□□ -0.12
PTK2-253ENST00000523805 MAP3K13O43283 966 aa14.32□□□□□ -0.12
PTK2-253ENST00000523805 FBXO3Q9UK99 471 aa14.31□□□□□ -0.12
PTK2-253ENST00000523805 TOP2BQ02880 1626 aa14.3□□□□□ -0.12
PTK2-253ENST00000523805 SLC39A7Q92504 469 aa14.29□□□□□ -0.12
PTK2-253ENST00000523805 METRNQ9UJH8 293 aa14.29□□□□□ -0.12
PTK2-253ENST00000523805 TRPC6Q9Y210 931 aa14.28□□□□□ -0.12
PTK2-253ENST00000523805 ADAMTS12P58397 1594 aa14.27□□□□□ -0.12
PTK2-253ENST00000523805 WRNQ14191 1432 aaPredicted RBP eCLIP14.27□□□□□ -0.12
PTK2-253ENST00000523805 BMP2KQ9NSY1 1161 aaPredicted RBP14.27□□□□□ -0.13
PTK2-253ENST00000523805 C7P10643 843 aa14.26□□□□□ -0.13
PTK2-253ENST00000523805 ATN1P54259 1190 aaPredicted RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms