RNA–Protein interactions for RNA: ENST00000523805.5

PTK2-253, Transcript of protein tyrosine kinase 2, humanhuman

TSL 3

Gene PTK2, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK2-253ENST00000523805 AEBP2Q6ZN18 517 aaPredicted RBP29.53■■■□□ 2.32
PTK2-253ENST00000523805 CHIC1Q5VXU3 224 aa28.09■■■□□ 2.09
PTK2-253ENST00000523805 SENP3Q9H4L4 574 aaPredicted RBP25.18■■□□□ 1.62
PTK2-253ENST00000523805 PHF23Q9BUL5 403 aaPredicted RBP24.81■■□□□ 1.56
PTK2-253ENST00000523805 FOXD1Q16676 465 aa23.45■■□□□ 1.34
PTK2-253ENST00000523805 PLPPR3Q6T4P5 718 aa22.45■■□□□ 1.18
PTK2-253ENST00000523805 PPP6R1Q9UPN7 881 aa21.95■■□□□ 1.1
PTK2-253ENST00000523805 MSH5O43196 834 aa21.93■■□□□ 1.1
PTK2-253ENST00000523805 PIAS4Q8N2W9 510 aaPredicted RBP21.9■■□□□ 1.1
PTK2-253ENST00000523805 ADRA2BP18089 450 aa21.86■■□□□ 1.09
PTK2-253ENST00000523805 POTEDQ86YR6 584 aa21.3■■□□□ 1
PTK2-253ENST00000523805 MAPK8IP2Q13387 824 aaPredicted RBP20.05■□□□□ 0.8
PTK2-253ENST00000523805 NISCHQ9Y2I1 1504 aa20.01■□□□□ 0.79
PTK2-253ENST00000523805 SCAF1Q9H7N4 1312 aaKnown RBP20■□□□□ 0.79
PTK2-253ENST00000523805 DMRT2Q9Y5R5 561 aa19.99■□□□□ 0.79
PTK2-253ENST00000523805 PPP4R3CPQ6ZMV5 832 aa19.67■□□□□ 0.74
PTK2-253ENST00000523805 CNKSR2Q8WXI2 1034 aa19.3■□□□□ 0.68
PTK2-253ENST00000523805 HOXD11P31277 338 aaPredicted RBP19.29■□□□□ 0.68
PTK2-253ENST00000523805 RNF216Q9NWF9 866 aaPredicted RBP19.13■□□□□ 0.65
PTK2-253ENST00000523805 DCAF8L1A6NGE4 600 aa19.03■□□□□ 0.64
PTK2-253ENST00000523805 NCBP3Q53F19 620 aaKnown RBP18.91■□□□□ 0.62
PTK2-253ENST00000523805 RNF39Q9H2S5 420 aa18.74■□□□□ 0.59
PTK2-253ENST00000523805 CACNB1Q02641 598 aaPredicted RBP18.72■□□□□ 0.59
PTK2-253ENST00000523805 NPM3O75607 178 aaKnown RBP18.68■□□□□ 0.58
PTK2-253ENST00000523805 DNAJC5BQ9UF47 199 aa18.66■□□□□ 0.58
PTK2-253ENST00000523805 C1QBPQ07021 282 aaKnown RBP18.45■□□□□ 0.54
PTK2-253ENST00000523805 KCNA4P22459 653 aa18.36■□□□□ 0.53
PTK2-253ENST00000523805 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.28■□□□□ 0.525e-7■■■□□ 16
PTK2-253ENST00000523805 CCDC180Q9P1Z9 1646 aa18.01■□□□□ 0.47
PTK2-253ENST00000523805 ABCC9O60706 1549 aa18■□□□□ 0.47
PTK2-253ENST00000523805 U3KPZ7 1027 aaPredicted RBP17.98■□□□□ 0.47
PTK2-253ENST00000523805 SLC4A2P04920 1241 aa17.84■□□□□ 0.45
PTK2-253ENST00000523805 SPINK5Q9NQ38 1064 aaPredicted RBP17.67■□□□□ 0.42
PTK2-253ENST00000523805 CAPN15O75808 1086 aa17.59■□□□□ 0.41
PTK2-253ENST00000523805 DSG3P32926 999 aa17.54■□□□□ 0.4
PTK2-253ENST00000523805 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.45■□□□□ 0.38
PTK2-253ENST00000523805 APLP2Q06481 763 aa17.45■□□□□ 0.38
PTK2-253ENST00000523805 HNRNPUL2Q1KMD3 747 aaKnown RBP17.45■□□□□ 0.38
PTK2-253ENST00000523805 SAMD1Q6SPF0 538 aaPredicted RBP17.37■□□□□ 0.37
PTK2-253ENST00000523805 ZNF219Q9P2Y4 722 aaPredicted RBP17.35■□□□□ 0.37
PTK2-253ENST00000523805 SLC4A1APQ9BWU0 796 aaKnown RBP17.32■□□□□ 0.36
PTK2-253ENST00000523805 TRHP20396 242 aaPredicted RBP17.31■□□□□ 0.36
PTK2-253ENST00000523805 MYCNP04198 464 aaPredicted RBP17.28■□□□□ 0.36
PTK2-253ENST00000523805 ABCB7O75027 752 aa17.2■□□□□ 0.34
PTK2-253ENST00000523805 FOXD4L1Q9NU39 408 aa17.13■□□□□ 0.33
PTK2-253ENST00000523805 RB1CC1Q8TDY2 1594 aa17.1■□□□□ 0.33
PTK2-253ENST00000523805 DCAF8L2P0C7V8 631 aa16.95■□□□□ 0.3
PTK2-253ENST00000523805 NACADO15069 1562 aa16.94■□□□□ 0.3
PTK2-253ENST00000523805 ZBTB22O15209 634 aa16.92■□□□□ 0.3
PTK2-253ENST00000523805 POLA2Q14181 598 aa16.88■□□□□ 0.29
PTK2-253ENST00000523805 ATF5Q9Y2D1 282 aaPredicted RBP16.86■□□□□ 0.29
PTK2-253ENST00000523805 UNC13AQ9UPW8 1703 aa16.86■□□□□ 0.29
PTK2-253ENST00000523805 RBM42Q9BTD8 480 aaKnown RBP16.73■□□□□ 0.27
PTK2-253ENST00000523805 PABPN1Q86U42 306 aaKnown RBP eCLIP16.72■□□□□ 0.27
PTK2-253ENST00000523805 POTEHQ6S545 545 aa16.69■□□□□ 0.26
PTK2-253ENST00000523805 ATXN8OSP0DMR3 200 aa16.62■□□□□ 0.25
PTK2-253ENST00000523805 MYO15BQ96JP2 1530 aa16.61■□□□□ 0.25
PTK2-253ENST00000523805 ZCCHC6Q5VYS8 1495 aaKnown RBP16.61■□□□□ 0.25
PTK2-253ENST00000523805 BICRAQ9NZM4 1560 aa16.6■□□□□ 0.25
PTK2-253ENST00000523805 ZBTB12Q9Y330 459 aaPredicted RBP16.6■□□□□ 0.25
PTK2-253ENST00000523805 SCRIBQ14160 1630 aa16.5■□□□□ 0.23
PTK2-253ENST00000523805 DCAF1Q9Y4B6 1507 aa16.45■□□□□ 0.22
PTK2-253ENST00000523805 OSCARQ8IYS5 282 aa16.39■□□□□ 0.21
PTK2-253ENST00000523805 AKT1S1Q96B36 256 aa16.36■□□□□ 0.21
PTK2-253ENST00000523805 CHRDL2Q6WN34 429 aa16.34■□□□□ 0.21
PTK2-253ENST00000523805 SHROOM4Q9ULL8 1493 aa16.26■□□□□ 0.19
PTK2-253ENST00000523805 CC2D2AQ9P2K1 1620 aa16.26■□□□□ 0.19
PTK2-253ENST00000523805 EIF4G1Q04637 1599 aaKnown RBP16.2■□□□□ 0.18
PTK2-253ENST00000523805 REM2Q8IYK8 340 aaPredicted RBP16.19■□□□□ 0.18
PTK2-253ENST00000523805 FBLN2P98095 1184 aa16.17■□□□□ 0.18
PTK2-253ENST00000523805 CECR2Q9BXF3 1484 aa16.16■□□□□ 0.18
PTK2-253ENST00000523805 CSRNP3Q8WYN3 585 aa16.15■□□□□ 0.18
PTK2-253ENST00000523805 MKRN4PQ13434 485 aaPredicted RBP16.12■□□□□ 0.17
PTK2-253ENST00000523805 SPDYE2BA6NHP3 402 aa16.09■□□□□ 0.17
PTK2-253ENST00000523805 SPDYE6P0CI01 402 aa16.09■□□□□ 0.17
PTK2-253ENST00000523805 SPDYE2Q495Y8 402 aa16.09■□□□□ 0.17
PTK2-253ENST00000523805 PITPNM1O00562 1244 aa16.04■□□□□ 0.16
PTK2-253ENST00000523805 PIP4P2Q8N4L2 257 aa15.97■□□□□ 0.15
PTK2-253ENST00000523805 SSUH2Q9Y2M2 353 aa15.92■□□□□ 0.14
PTK2-253ENST00000523805 EHMT2Q96KQ7 1210 aa15.91■□□□□ 0.14
PTK2-253ENST00000523805 FXR2P51116 673 aaKnown RBP eCLIP15.9■□□□□ 0.143e-6■■■■□ 25.3
PTK2-253ENST00000523805 ZNF692Q9BU19 519 aaPredicted RBP15.84■□□□□ 0.13
PTK2-253ENST00000523805 SPDYE1Q8NFV5 336 aaPredicted RBP15.77■□□□□ 0.12
PTK2-253ENST00000523805 SP7Q8TDD2 431 aaPredicted RBP15.68■□□□□ 0.1
PTK2-253ENST00000523805 SMARCA4P51532 1647 aa15.68■□□□□ 0.1
PTK2-253ENST00000523805 CLEC11AQ9Y240 323 aa15.67■□□□□ 0.1
PTK2-253ENST00000523805 ATAD2BQ9ULI0 1458 aa15.59■□□□□ 0.09
PTK2-253ENST00000523805 HAX1O00165 279 aa15.59■□□□□ 0.09
PTK2-253ENST00000523805 PRKAR2AP13861 404 aaKnown RBP15.59■□□□□ 0.09
PTK2-253ENST00000523805 NCAPD3P42695 1498 aa15.58■□□□□ 0.08
PTK2-253ENST00000523805 SMARCA2P51531 1590 aa15.58■□□□□ 0.08
PTK2-253ENST00000523805 BAZ1AQ9NRL2 1556 aaPredicted RBP15.55■□□□□ 0.08
PTK2-253ENST00000523805 HMGXB3Q12766 1538 aa15.54■□□□□ 0.08
PTK2-253ENST00000523805 ERCC6Q03468 1493 aa15.53■□□□□ 0.08
PTK2-253ENST00000523805 BAZ1BQ9UIG0 1483 aaKnown RBP15.5■□□□□ 0.07
PTK2-253ENST00000523805 NESP48681 1621 aa15.47■□□□□ 0.07
PTK2-253ENST00000523805 MROH2BQ7Z745 1585 aa15.46■□□□□ 0.07
PTK2-253ENST00000523805 EVX2Q03828 476 aa15.46■□□□□ 0.07
PTK2-253ENST00000523805 PRR29P0C7W0 189 aa15.45■□□□□ 0.06
PTK2-253ENST00000523805 PEG3Q9GZU2 1588 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms