RNA–Protein interactions for RNA: ENST00000523685.5

CTNNA1-239, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-239ENST00000523685 EIF4G1Q04637 1599 aaKnown RBP10.64□□□□□ -0.71
CTNNA1-239ENST00000523685 NUBP1P53384 320 aa10.62□□□□□ -0.71
CTNNA1-239ENST00000523685 GSE1Q14687 1217 aa10.59□□□□□ -0.71
CTNNA1-239ENST00000523685 NPM1P06748 294 aaKnown RBP eCLIP10.58□□□□□ -0.72
CTNNA1-239ENST00000523685 DCAF8Q5TAQ9 597 aa10.57□□□□□ -0.72
CTNNA1-239ENST00000523685 CHADLQ6NUI6 762 aa10.57□□□□□ -0.72
CTNNA1-239ENST00000523685 POTEHQ6S545 545 aa10.57□□□□□ -0.72
CTNNA1-239ENST00000523685 TRIM41Q8WV44 630 aa10.56□□□□□ -0.72
CTNNA1-239ENST00000523685 FXR2P51116 673 aaKnown RBP eCLIP10.55□□□□□ -0.721e-6■■□□□ 12.9
CTNNA1-239ENST00000523685 CHRDL2Q6WN34 429 aa10.55□□□□□ -0.72
CTNNA1-239ENST00000523685 FAM212AQ96EL1 285 aa10.54□□□□□ -0.72
CTNNA1-239ENST00000523685 PRKAR2AP13861 404 aaKnown RBP10.53□□□□□ -0.72
CTNNA1-239ENST00000523685 RGL2O15211 777 aa10.52□□□□□ -0.73
CTNNA1-239ENST00000523685 FARP1Q9Y4F1 1045 aaPredicted RBP10.52□□□□□ -0.73
CTNNA1-239ENST00000523685 SLC24A1O60721 1099 aa10.51□□□□□ -0.73
CTNNA1-239ENST00000523685 RASEFQ8IZ41 740 aa10.51□□□□□ -0.73
CTNNA1-239ENST00000523685 PIP4P2Q8N4L2 257 aa10.47□□□□□ -0.73
CTNNA1-239ENST00000523685 CHRM1P11229 460 aaPredicted RBP10.43□□□□□ -0.74
CTNNA1-239ENST00000523685 TSPYL2Q9H2G4 693 aaPredicted RBP10.4□□□□□ -0.74
CTNNA1-239ENST00000523685 RNF25Q96BH1 459 aaPredicted RBP10.39□□□□□ -0.75
CTNNA1-239ENST00000523685 DNAJC5Q9H3Z4 198 aa10.39□□□□□ -0.75
CTNNA1-239ENST00000523685 BBXQ8WY36 941 aaPredicted RBP10.38□□□□□ -0.75
CTNNA1-239ENST00000523685 RIOK3O14730 519 aaKnown RBP10.37□□□□□ -0.75
CTNNA1-239ENST00000523685 PYGBP11216 843 aa10.37□□□□□ -0.75
CTNNA1-239ENST00000523685 PLCB2Q00722 1185 aa10.37□□□□□ -0.75
CTNNA1-239ENST00000523685 TAOK2Q9UL54 1235 aa10.37□□□□□ -0.75
CTNNA1-239ENST00000523685 CHGAP10645 457 aaKnown RBP10.36□□□□□ -0.75
CTNNA1-239ENST00000523685 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.35□□□□□ -0.75
CTNNA1-239ENST00000523685 PAK3O75914 559 aaPredicted RBP10.33□□□□□ -0.76
CTNNA1-239ENST00000523685 CCDC61Q9Y6R9 512 aa10.31□□□□□ -0.76
CTNNA1-239ENST00000523685 VGFO15240 615 aaPredicted RBP10.3□□□□□ -0.76
CTNNA1-239ENST00000523685 HS6ST3Q8IZP7 471 aa10.3□□□□□ -0.76
CTNNA1-239ENST00000523685 ERCC6Q03468 1493 aa10.3□□□□□ -0.76
CTNNA1-239ENST00000523685 NCAPD3P42695 1498 aa10.26□□□□□ -0.77
CTNNA1-239ENST00000523685 ZNF467Q7Z7K2 595 aaPredicted RBP10.26□□□□□ -0.77
CTNNA1-239ENST00000523685 SGIP1Q9BQI5 828 aa10.26□□□□□ -0.77
CTNNA1-239ENST00000523685 PAXIP1Q6ZW49 1069 aaPredicted RBP10.25□□□□□ -0.77
CTNNA1-239ENST00000523685 STK25O00506 426 aa10.24□□□□□ -0.77
CTNNA1-239ENST00000523685 CD44P16070 742 aaKnown RBP10.24□□□□□ -0.77
CTNNA1-239ENST00000523685 CUX2O14529 1486 aa10.23□□□□□ -0.77
CTNNA1-239ENST00000523685 ATAD2BQ9ULI0 1458 aa10.23□□□□□ -0.77
CTNNA1-239ENST00000523685 HAP1P54257 671 aaPredicted RBP10.23□□□□□ -0.77
CTNNA1-239ENST00000523685 SPRYD3Q8NCJ5 442 aa10.23□□□□□ -0.77
CTNNA1-239ENST00000523685 CFAP44Q96MT7 982 aa10.23□□□□□ -0.77
CTNNA1-239ENST00000523685 ZRANB1Q9UGI0 708 aa10.23□□□□□ -0.77
CTNNA1-239ENST00000523685 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.22□□□□□ -0.77
CTNNA1-239ENST00000523685 ZFP91Q96JP5 570 aaPredicted RBP10.22□□□□□ -0.77
CTNNA1-239ENST00000523685 ZNF579Q8NAF0 562 aaKnown RBP10.2□□□□□ -0.78
CTNNA1-239ENST00000523685 KIF12Q96FN5 646 aa10.2□□□□□ -0.78
CTNNA1-239ENST00000523685 PCDHB8Q9UN66 801 aa10.2□□□□□ -0.78
CTNNA1-239ENST00000523685 PCDHB13Q9Y5F0 798 aa10.2□□□□□ -0.78
CTNNA1-239ENST00000523685 BCL11BQ9C0K0 894 aaPredicted RBP10.19□□□□□ -0.78
CTNNA1-239ENST00000523685 STK24Q9Y6E0 443 aa10.19□□□□□ -0.78
CTNNA1-239ENST00000523685 NESP48681 1621 aa10.18□□□□□ -0.78
CTNNA1-239ENST00000523685 SMARCA2P51531 1590 aa10.18□□□□□ -0.78
CTNNA1-239ENST00000523685 C19orf67A6NJJ6 358 aa10.18□□□□□ -0.78
CTNNA1-239ENST00000523685 MAP3K13O43283 966 aa10.18□□□□□ -0.78
CTNNA1-239ENST00000523685 PDAP1Q13442 181 aaKnown RBP10.18□□□□□ -0.78
CTNNA1-239ENST00000523685 SMARCA4P51532 1647 aa10.18□□□□□ -0.78
CTNNA1-239ENST00000523685 HMGXB3Q12766 1538 aa10.16□□□□□ -0.78
CTNNA1-239ENST00000523685 IFNL1Q8IU54 200 aa10.15□□□□□ -0.78
CTNNA1-239ENST00000523685 BAZ1BQ9UIG0 1483 aaKnown RBP10.15□□□□□ -0.78
CTNNA1-239ENST00000523685 PSEN1P49768 467 aa10.14□□□□□ -0.79
CTNNA1-239ENST00000523685 NKX1-1Q15270 411 aaPredicted RBP10.14□□□□□ -0.79
CTNNA1-239ENST00000523685 PHF12Q96QT6 1004 aa10.14□□□□□ -0.79
CTNNA1-239ENST00000523685 BAZ1AQ9NRL2 1556 aaPredicted RBP10.12□□□□□ -0.79
CTNNA1-239ENST00000523685 GTPBP6O43824 516 aaPredicted RBP10.09□□□□□ -0.79
CTNNA1-239ENST00000523685 VSIG10Q8N0Z9 540 aa10.09□□□□□ -0.79
CTNNA1-239ENST00000523685 HAX1O00165 279 aa10.08□□□□□ -0.8
CTNNA1-239ENST00000523685 RYDENQ9NUL5 291 aaKnown RBP10.07□□□□□ -0.8
CTNNA1-239ENST00000523685 MROH2BQ7Z745 1585 aa10.06□□□□□ -0.8
CTNNA1-239ENST00000523685 TSHZ2Q9NRE2 1034 aa10.06□□□□□ -0.8
CTNNA1-239ENST00000523685 THOC2Q8NI27 1593 aaKnown RBP10.04□□□□□ -0.8
CTNNA1-239ENST00000523685 PEG3Q9GZU2 1588 aa10.04□□□□□ -0.8
CTNNA1-239ENST00000523685 MS4A3Q96HJ5 214 aa10.03□□□□□ -0.8
CTNNA1-239ENST00000523685 LAMC3Q9Y6N6 1575 aa10.03□□□□□ -0.8
CTNNA1-239ENST00000523685 PDS5BQ9NTI5 1447 aa10.02□□□□□ -0.81
CTNNA1-239ENST00000523685 EVX2Q03828 476 aa10□□□□□ -0.81
CTNNA1-239ENST00000523685 CABP2Q9NPB3 220 aa10□□□□□ -0.81
CTNNA1-239ENST00000523685 KIF21AQ7Z4S6 1674 aa9.99□□□□□ -0.81
CTNNA1-239ENST00000523685 KDM2AQ9Y2K7 1162 aa9.99□□□□□ -0.81
CTNNA1-239ENST00000523685 CLCN6P51797 869 aa9.98□□□□□ -0.81
CTNNA1-239ENST00000523685 EFCAB3Q8N7B9 438 aa9.98□□□□□ -0.81
CTNNA1-239ENST00000523685 TMEM106CQ9BVX2 250 aa9.98□□□□□ -0.81
CTNNA1-239ENST00000523685 CADPSQ9ULU8 1353 aa9.98□□□□□ -0.81
CTNNA1-239ENST00000523685 SOX12O15370 315 aa9.97□□□□□ -0.81
CTNNA1-239ENST00000523685 TRPC6Q9Y210 931 aa9.97□□□□□ -0.81
CTNNA1-239ENST00000523685 MFRPQ9BY79 579 aa9.96□□□□□ -0.82
CTNNA1-239ENST00000523685 MRC2Q9UBG0 1479 aa9.94□□□□□ -0.82
CTNNA1-239ENST00000523685 TIE1P35590 1138 aa9.94□□□□□ -0.82
CTNNA1-239ENST00000523685 GOLGA2Q08379 1002 aa9.94□□□□□ -0.82
CTNNA1-239ENST00000523685 GALR2O43603 387 aaPredicted RBP9.93□□□□□ -0.82
CTNNA1-239ENST00000523685 NLRP6P59044 892 aa9.93□□□□□ -0.82
CTNNA1-239ENST00000523685 WIZO95785 1651 aa9.93□□□□□ -0.82
CTNNA1-239ENST00000523685 PHF8Q9UPP1 1060 aa9.91□□□□□ -0.82
CTNNA1-239ENST00000523685 TTLL13PA6NNM8 815 aa9.9□□□□□ -0.82
CTNNA1-239ENST00000523685 FBXO22Q8NEZ5 403 aa9.9□□□□□ -0.82
CTNNA1-239ENST00000523685 MKRN3Q13064 507 aaKnown RBP9.89□□□□□ -0.83
CTNNA1-239ENST00000523685 BMP2KQ9NSY1 1161 aaPredicted RBP9.89□□□□□ -0.83
CTNNA1-239ENST00000523685 CEP164Q9UPV0 1460 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms