RNA–Protein interactions for RNA: ENST00000523387.5

CSMD1-212, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 3,989 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-212ENST00000523387 BAZ1BQ9UIG0 1483 aaKnown RBP12.37□□□□□ -0.43
CSMD1-212ENST00000523387 B4GALNT3Q6L9W6 998 aa12.37□□□□□ -0.43
CSMD1-212ENST00000523387 SETD5Q9C0A6 1442 aa12.36□□□□□ -0.43
CSMD1-212ENST00000523387 NPM2Q86SE8 214 aaKnown RBP12.35□□□□□ -0.43
CSMD1-212ENST00000523387 MRS2Q9HD23 443 aa12.35□□□□□ -0.43
CSMD1-212ENST00000523387 KIF21BO75037 1637 aa12.35□□□□□ -0.43
CSMD1-212ENST00000523387 ZBTB47Q9UFB7 747 aaPredicted RBP12.34□□□□□ -0.43
CSMD1-212ENST00000523387 FANCIQ9NVI1 1328 aa12.34□□□□□ -0.43
CSMD1-212ENST00000523387 NOP58Q9Y2X3 529 aaKnown RBP12.34□□□□□ -0.43
CSMD1-212ENST00000523387 CCDC136Q96JN2 1154 aa12.33□□□□□ -0.44
CSMD1-212ENST00000523387 TIMELESSQ9UNS1 1208 aa12.33□□□□□ -0.44
CSMD1-212ENST00000523387 SMARCA4P51532 1647 aa12.33□□□□□ -0.44
CSMD1-212ENST00000523387 DAXXQ9UER7 740 aaPredicted RBP12.33□□□□□ -0.44
CSMD1-212ENST00000523387 PPP1R15AO75807 674 aaPredicted RBP12.32□□□□□ -0.44
CSMD1-212ENST00000523387 MSH5O43196 834 aa12.31□□□□□ -0.44
CSMD1-212ENST00000523387 KIF27Q86VH2 1401 aa12.29□□□□□ -0.44
CSMD1-212ENST00000523387 EIF4G1Q04637 1599 aaKnown RBP12.27□□□□□ -0.44
CSMD1-212ENST00000523387 EIF4G2P78344 907 aaKnown RBP eCLIP12.27□□□□□ -0.45
CSMD1-212ENST00000523387 ZNF326Q5BKZ1 582 aaKnown RBP12.25□□□□□ -0.45
CSMD1-212ENST00000523387 ERICH6BQ5W0A0 696 aa12.25□□□□□ -0.45
CSMD1-212ENST00000523387 SENP3-EIF4A1A0A087X0R7 540 aa12.24□□□□□ -0.45
CSMD1-212ENST00000523387 RRBP1Q9P2E9 1410 aaKnown RBP12.24□□□□□ -0.45
CSMD1-212ENST00000523387 RTN4Q9NQC3 1192 aaKnown RBP12.24□□□□□ -0.45
CSMD1-212ENST00000523387 CHIC2Q9UKJ5 165 aa12.24□□□□□ -0.45
CSMD1-212ENST00000523387 SYNJ1O43426 1573 aa12.23□□□□□ -0.45
CSMD1-212ENST00000523387 HSPA5P11021 654 aaKnown RBP12.2□□□□□ -0.46
CSMD1-212ENST00000523387 ARAP1Q96P48 1450 aa12.2□□□□□ -0.46
CSMD1-212ENST00000523387 RRP7BPQ9NSQ0 103 aa12.2□□□□□ -0.46
CSMD1-212ENST00000523387 EIF5BO60841 1220 aaKnown RBP12.19□□□□□ -0.46
CSMD1-212ENST00000523387 MTUS2Q5JR59 1369 aa12.19□□□□□ -0.46
CSMD1-212ENST00000523387 WDR97A6NE52 1622 aa12.18□□□□□ -0.46
CSMD1-212ENST00000523387 LAS1LQ9Y4W2 734 aaKnown RBP12.17□□□□□ -0.46
CSMD1-212ENST00000523387 SALL2Q9Y467 1007 aaPredicted RBP12.16□□□□□ -0.46
CSMD1-212ENST00000523387 TMC1Q8TDI8 760 aa12.15□□□□□ -0.46
CSMD1-212ENST00000523387 ARID3CA6NKF2 412 aa12.14□□□□□ -0.47
CSMD1-212ENST00000523387 NEFMP07197 916 aa12.14□□□□□ -0.47
CSMD1-212ENST00000523387 FHAD1B1AJZ9 1412 aa12.14□□□□□ -0.47
CSMD1-212ENST00000523387 IPO9Q96P70 1041 aaKnown RBP12.13□□□□□ -0.47
CSMD1-212ENST00000523387 ARHGAP35Q9NRY4 1499 aa12.12□□□□□ -0.47
CSMD1-212ENST00000523387 PHLDB1Q86UU1 1377 aa12.12□□□□□ -0.47
CSMD1-212ENST00000523387 CARMIL1Q5VZK9 1371 aa12.11□□□□□ -0.47
CSMD1-212ENST00000523387 PAK3O75914 559 aaPredicted RBP12.1□□□□□ -0.47
CSMD1-212ENST00000523387 CUX2O14529 1486 aa12.1□□□□□ -0.47
CSMD1-212ENST00000523387 PRXQ9BXM0 1461 aa12.09□□□□□ -0.47
CSMD1-212ENST00000523387 PRKCSHP14314 528 aaPredicted RBP12.09□□□□□ -0.47
CSMD1-212ENST00000523387 ERICH3Q5RHP9 1530 aa12.08□□□□□ -0.48
CSMD1-212ENST00000523387 ATAD2BQ9ULI0 1458 aa12.07□□□□□ -0.48
CSMD1-212ENST00000523387 PRKRIP1Q9H875 184 aaPredicted RBP12.07□□□□□ -0.48
CSMD1-212ENST00000523387 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.07□□□□□ -0.48
CSMD1-212ENST00000523387 ZBED9Q6R2W3 1325 aa12.07□□□□□ -0.48
CSMD1-212ENST00000523387 PPM1GO15355 546 aaPredicted RBP12.06□□□□□ -0.48
CSMD1-212ENST00000523387 ANO8Q9HCE9 1232 aaPredicted RBP12.06□□□□□ -0.48
CSMD1-212ENST00000523387 MAPKBP1O60336 1514 aa12.06□□□□□ -0.48
CSMD1-212ENST00000523387 WASHC2AQ641Q2 1341 aa12.05□□□□□ -0.48
CSMD1-212ENST00000523387 FOXD1Q16676 465 aa12.04□□□□□ -0.48
CSMD1-212ENST00000523387 CCDC184Q52MB2 194 aa12.04□□□□□ -0.48
CSMD1-212ENST00000523387 LRRC9Q6ZRR7 1453 aa12.04□□□□□ -0.48
CSMD1-212ENST00000523387 NUDCQ9Y266 331 aa12.04□□□□□ -0.48
CSMD1-212ENST00000523387 SLC4A1APQ9BWU0 796 aaKnown RBP12.03□□□□□ -0.48
CSMD1-212ENST00000523387 CCDC18Q5T9S5 1454 aa12.02□□□□□ -0.48
CSMD1-212ENST00000523387 L3MBTL2Q969R5 705 aa12.02□□□□□ -0.48
CSMD1-212ENST00000523387 FHOD3Q2V2M9 1422 aa12.01□□□□□ -0.49
CSMD1-212ENST00000523387 DDRGK1Q96HY6 314 aa12.01□□□□□ -0.49
CSMD1-212ENST00000523387 FMN1Q68DA7 1419 aa11.99□□□□□ -0.49
CSMD1-212ENST00000523387 IL27Q8NEV9 243 aa11.99□□□□□ -0.49
CSMD1-212ENST00000523387 TOP2BQ02880 1626 aa11.99□□□□□ -0.49
CSMD1-212ENST00000523387 TCERG1O14776 1098 aaKnown RBP11.97□□□□□ -0.49
CSMD1-212ENST00000523387 MPHOSPH9Q99550 1183 aa11.97□□□□□ -0.49
CSMD1-212ENST00000523387 CNTLNQ9NXG0 1405 aa11.97□□□□□ -0.49
CSMD1-212ENST00000523387 TIAM1Q13009 1591 aa11.97□□□□□ -0.49
CSMD1-212ENST00000523387 UACAQ9BZF9 1416 aa11.96□□□□□ -0.49
CSMD1-212ENST00000523387 IGF1RP08069 1367 aa11.96□□□□□ -0.49
CSMD1-212ENST00000523387 KDM2AQ9Y2K7 1162 aa11.95□□□□□ -0.5
CSMD1-212ENST00000523387 ZNF777Q9ULD5 760 aaPredicted RBP11.95□□□□□ -0.5
CSMD1-212ENST00000523387 CCDC7Q96M83 1385 aa11.94□□□□□ -0.5
CSMD1-212ENST00000523387 AKNAQ7Z591 1439 aa11.94□□□□□ -0.5
CSMD1-212ENST00000523387 FGD6Q6ZV73 1430 aa11.93□□□□□ -0.5
CSMD1-212ENST00000523387 PDE4AP27815 886 aa11.93□□□□□ -0.5
CSMD1-212ENST00000523387 USP35Q9P2H5 1018 aa11.93□□□□□ -0.5
CSMD1-212ENST00000523387 RCAN3Q9UKA8 241 aa11.93□□□□□ -0.5
CSMD1-212ENST00000523387 ARXQ96QS3 562 aa11.92□□□□□ -0.5
CSMD1-212ENST00000523387 EXOC6Q8TAG9 804 aa11.92□□□□□ -0.5
CSMD1-212ENST00000523387 KIF7Q2M1P5 1343 aa11.9□□□□□ -0.5
CSMD1-212ENST00000523387 CARD11Q9BXL7 1154 aa11.9□□□□□ -0.5
CSMD1-212ENST00000523387 CUX1P39880 1505 aa11.87□□□□□ -0.51
CSMD1-212ENST00000523387 C11orf95C9JLR9 678 aaPredicted RBP11.87□□□□□ -0.51
CSMD1-212ENST00000523387 RRP1P56182 461 aaKnown RBP11.87□□□□□ -0.51
CSMD1-212ENST00000523387 SLC4A3P48751 1232 aa11.87□□□□□ -0.51
CSMD1-212ENST00000523387 RGS3P49796 1198 aa11.86□□□□□ -0.51
CSMD1-212ENST00000523387 CANXP27824 592 aaKnown RBP11.86□□□□□ -0.51
CSMD1-212ENST00000523387 HFM1A2PYH4 1435 aa11.86□□□□□ -0.51
CSMD1-212ENST00000523387 GSE1Q14687 1217 aa11.86□□□□□ -0.51
CSMD1-212ENST00000523387 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.85□□□□□ -0.51
CSMD1-212ENST00000523387 SMG6Q86US8 1419 aaKnown RBP11.84□□□□□ -0.51
CSMD1-212ENST00000523387 MAP3K1Q13233 1512 aa11.84□□□□□ -0.51
CSMD1-212ENST00000523387 BRPF3Q9ULD4 1205 aa11.84□□□□□ -0.51
CSMD1-212ENST00000523387 GLIPR1L2Q4G1C9 344 aa11.83□□□□□ -0.52
CSMD1-212ENST00000523387 PLIN1O60240 522 aa11.83□□□□□ -0.52
CSMD1-212ENST00000523387 NBPF8Q3BBV2 869 aa11.83□□□□□ -0.52
CSMD1-212ENST00000523387 MS4A1P11836 297 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms