RNA–Protein interactions for RNA: ENST00000523283.5

LINC00534-202, long intergenic non-protein coding RNA 534, humanhuman

TSL 2

Gene LINC00534, Length 772 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00534-202ENST00000523283 MIER1Q8N108 512 aa10.67□□□□□ -0.7
LINC00534-202ENST00000523283 TOP2AP11388 1531 aaKnown RBP10.67□□□□□ -0.7
LINC00534-202ENST00000523283 SP7Q8TDD2 431 aaPredicted RBP10.66□□□□□ -0.7
LINC00534-202ENST00000523283 VASPP50552 380 aaPredicted RBP10.64□□□□□ -0.71
LINC00534-202ENST00000523283 PLCD3Q8N3E9 789 aa10.63□□□□□ -0.71
LINC00534-202ENST00000523283 CHADLQ6NUI6 762 aa10.62□□□□□ -0.71
LINC00534-202ENST00000523283 ZBTB47Q9UFB7 747 aaPredicted RBP10.62□□□□□ -0.71
LINC00534-202ENST00000523283 ATAD2BQ9ULI0 1458 aa10.61□□□□□ -0.71
LINC00534-202ENST00000523283 TRIM41Q8WV44 630 aa10.61□□□□□ -0.71
LINC00534-202ENST00000523283 SMARCA2P51531 1590 aa10.6□□□□□ -0.71
LINC00534-202ENST00000523283 FARP1Q9Y4F1 1045 aaPredicted RBP10.6□□□□□ -0.71
LINC00534-202ENST00000523283 PEG3Q9GZU2 1588 aa10.6□□□□□ -0.71
LINC00534-202ENST00000523283 CCDC88BA6NC98 1476 aa10.59□□□□□ -0.71
LINC00534-202ENST00000523283 BAZ1BQ9UIG0 1483 aaKnown RBP10.58□□□□□ -0.72
LINC00534-202ENST00000523283 HAX1O00165 279 aa10.57□□□□□ -0.72
LINC00534-202ENST00000523283 NPM1P06748 294 aaKnown RBP eCLIP10.57□□□□□ -0.72
LINC00534-202ENST00000523283 MNX1P50219 401 aaPredicted RBP10.56□□□□□ -0.72
LINC00534-202ENST00000523283 EIF4G1Q04637 1599 aaKnown RBP10.56□□□□□ -0.72
LINC00534-202ENST00000523283 NCAPD3P42695 1498 aa10.5□□□□□ -0.73
LINC00534-202ENST00000523283 IFNLR1Q8IU57 520 aaPredicted RBP10.48□□□□□ -0.73
LINC00534-202ENST00000523283 KLHL34Q8N239 644 aa10.48□□□□□ -0.73
LINC00534-202ENST00000523283 HMGXB3Q12766 1538 aa10.46□□□□□ -0.74
LINC00534-202ENST00000523283 C19orf67A6NJJ6 358 aa10.45□□□□□ -0.74
LINC00534-202ENST00000523283 FAM9AQ8IZU1 332 aaPredicted RBP10.43□□□□□ -0.74
LINC00534-202ENST00000523283 LOC105371045A0A1W2PR82 267 aa10.41□□□□□ -0.74
LINC00534-202ENST00000523283 EVX2Q03828 476 aa10.41□□□□□ -0.74
LINC00534-202ENST00000523283 SPOCK2Q92563 424 aa10.41□□□□□ -0.74
LINC00534-202ENST00000523283 NUBP1P53384 320 aa10.4□□□□□ -0.74
LINC00534-202ENST00000523283 PAK3O75914 559 aaPredicted RBP10.39□□□□□ -0.75
LINC00534-202ENST00000523283 CC2D2AQ9P2K1 1620 aa10.38□□□□□ -0.75
LINC00534-202ENST00000523283 CD44P16070 742 aaKnown RBP10.38□□□□□ -0.75
LINC00534-202ENST00000523283 ABCC8Q09428 1581 aa10.37□□□□□ -0.75
LINC00534-202ENST00000523283 WRNQ14191 1432 aaPredicted RBP eCLIP10.34□□□□□ -0.751e-7■■■■■ 66.8
LINC00534-202ENST00000523283 CLCN6P51797 869 aa10.34□□□□□ -0.75
LINC00534-202ENST00000523283 RASEFQ8IZ41 740 aa10.33□□□□□ -0.76
LINC00534-202ENST00000523283 FAM212AQ96EL1 285 aa10.33□□□□□ -0.76
LINC00534-202ENST00000523283 GSE1Q14687 1217 aa10.32□□□□□ -0.76
LINC00534-202ENST00000523283 ZRANB1Q9UGI0 708 aa10.32□□□□□ -0.76
LINC00534-202ENST00000523283 TSPYL2Q9H2G4 693 aaPredicted RBP10.3□□□□□ -0.76
LINC00534-202ENST00000523283 DCAF8Q5TAQ9 597 aa10.29□□□□□ -0.76
LINC00534-202ENST00000523283 CFTRP13569 1480 aa10.29□□□□□ -0.76
LINC00534-202ENST00000523283 ZNF579Q8NAF0 562 aaKnown RBP10.28□□□□□ -0.76
LINC00534-202ENST00000523283 CADPSQ9ULU8 1353 aa10.27□□□□□ -0.76
LINC00534-202ENST00000523283 CCDC61Q9Y6R9 512 aa10.26□□□□□ -0.77
LINC00534-202ENST00000523283 EEA1Q15075 1411 aa10.25□□□□□ -0.77
LINC00534-202ENST00000523283 SOGA1O94964 1423 aa10.24□□□□□ -0.77
LINC00534-202ENST00000523283 SYNJ1O43426 1573 aa10.22□□□□□ -0.77
LINC00534-202ENST00000523283 CHRM1P11229 460 aaPredicted RBP10.22□□□□□ -0.77
LINC00534-202ENST00000523283 CIZ1Q9ULV3 898 aaPredicted RBP10.21□□□□□ -0.77
LINC00534-202ENST00000523283 SGIP1Q9BQI5 828 aa10.2□□□□□ -0.78
LINC00534-202ENST00000523283 GABBR2O75899 941 aa10.19□□□□□ -0.78
LINC00534-202ENST00000523283 TOP2BQ02880 1626 aa10.18□□□□□ -0.78
LINC00534-202ENST00000523283 UBTFP17480 764 aaKnown RBP10.17□□□□□ -0.78
LINC00534-202ENST00000523283 PLCB2Q00722 1185 aa10.17□□□□□ -0.78
LINC00534-202ENST00000523283 KIF12Q96FN5 646 aa10.17□□□□□ -0.78
LINC00534-202ENST00000523283 RUSC2Q8N2Y8 1516 aa10.16□□□□□ -0.78
LINC00534-202ENST00000523283 PHF12Q96QT6 1004 aa10.15□□□□□ -0.78
LINC00534-202ENST00000523283 CUX1P39880 1505 aa10.15□□□□□ -0.78
LINC00534-202ENST00000523283 FANCD2Q9BXW9 1451 aa10.15□□□□□ -0.78
LINC00534-202ENST00000523283 BIVM-ERCC5R4GMW8 1640 aa10.15□□□□□ -0.79
LINC00534-202ENST00000523283 PRDM2Q13029 1718 aa10.13□□□□□ -0.79
LINC00534-202ENST00000523283 NESP48681 1621 aa10.12□□□□□ -0.79
LINC00534-202ENST00000523283 MAP3K13O43283 966 aa10.12□□□□□ -0.79
LINC00534-202ENST00000523283 PYGBP11216 843 aa10.12□□□□□ -0.79
LINC00534-202ENST00000523283 GOLGA3Q08378 1498 aa10.11□□□□□ -0.79
LINC00534-202ENST00000523283 TNIKQ9UKE5 1360 aa10.11□□□□□ -0.79
LINC00534-202ENST00000523283 CEP164Q9UPV0 1460 aa10.1□□□□□ -0.79
LINC00534-202ENST00000523283 LAMC3Q9Y6N6 1575 aa10.1□□□□□ -0.79
LINC00534-202ENST00000523283 KIF27Q86VH2 1401 aa10.1□□□□□ -0.79
LINC00534-202ENST00000523283 PDS5BQ9NTI5 1447 aa10.1□□□□□ -0.79
LINC00534-202ENST00000523283 PKD2Q13563 968 aa10.09□□□□□ -0.79
LINC00534-202ENST00000523283 PCDHB13Q9Y5F0 798 aa10.09□□□□□ -0.79
LINC00534-202ENST00000523283 ZNF467Q7Z7K2 595 aaPredicted RBP10.07□□□□□ -0.8
LINC00534-202ENST00000523283 GALR2O43603 387 aaPredicted RBP10.06□□□□□ -0.8
LINC00534-202ENST00000523283 MS4A3Q96HJ5 214 aa10.06□□□□□ -0.8
LINC00534-202ENST00000523283 PCGF6Q9BYE7 350 aa10.06□□□□□ -0.8
LINC00534-202ENST00000523283 FGD5Q6ZNL6 1462 aa10.05□□□□□ -0.8
LINC00534-202ENST00000523283 ECM2O94769 699 aaPredicted RBP10.05□□□□□ -0.8
LINC00534-202ENST00000523283 HAP1P54257 671 aaPredicted RBP10.05□□□□□ -0.8
LINC00534-202ENST00000523283 CEP162Q5TB80 1403 aa10.05□□□□□ -0.8
LINC00534-202ENST00000523283 CUX2O14529 1486 aa10.04□□□□□ -0.8
LINC00534-202ENST00000523283 KIF21BO75037 1637 aa10.04□□□□□ -0.8
LINC00534-202ENST00000523283 DNMBPQ6XZF7 1577 aa10.04□□□□□ -0.8
LINC00534-202ENST00000523283 IFNL1Q8IU54 200 aa10.03□□□□□ -0.8
LINC00534-202ENST00000523283 TOPBP1Q92547 1522 aa10.02□□□□□ -0.8
LINC00534-202ENST00000523283 TRIM26Q12899 539 aaPredicted RBP10.02□□□□□ -0.81
LINC00534-202ENST00000523283 TAOK2Q9UL54 1235 aa10.02□□□□□ -0.81
LINC00534-202ENST00000523283 DCBLD2Q96PD2 775 aa10.01□□□□□ -0.81
LINC00534-202ENST00000523283 RAPGEF2Q9Y4G8 1499 aa10.01□□□□□ -0.81
LINC00534-202ENST00000523283 TIE1P35590 1138 aa10□□□□□ -0.81
LINC00534-202ENST00000523283 RANGAP1P46060 587 aaPredicted RBP10□□□□□ -0.81
LINC00534-202ENST00000523283 PRXQ9BXM0 1461 aa9.99□□□□□ -0.81
LINC00534-202ENST00000523283 BCANQ96GW7 911 aa9.99□□□□□ -0.81
LINC00534-202ENST00000523283 IGF1RP08069 1367 aa9.99□□□□□ -0.81
LINC00534-202ENST00000523283 POLA1P09884 1462 aaPredicted RBP9.98□□□□□ -0.81
LINC00534-202ENST00000523283 URB2Q14146 1524 aaKnown RBP9.98□□□□□ -0.81
LINC00534-202ENST00000523283 RIOK3O14730 519 aaKnown RBP9.98□□□□□ -0.81
LINC00534-202ENST00000523283 LHX8Q68G74 356 aa9.98□□□□□ -0.81
LINC00534-202ENST00000523283 PCDHB8Q9UN66 801 aa9.98□□□□□ -0.81
LINC00534-202ENST00000523283 CLIP1P30622 1438 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms