RNA–Protein interactions for RNA: ENST00000522653.5

TCF7-223, Transcript of transcription factor 7, human

TSL 2

Gene TCF7, Length 5,340 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF7-223	ENST00000522653	CARMIL2	Q6F5E8	1435 aa		13.87	□□□□□ -0.19
TCF7-223	ENST00000522653	BCL11A	Q9H165	835 aa		13.86	□□□□□ -0.19
TCF7-223	ENST00000522653	ZBTB7C	A1YPR0	619 aa		13.86	□□□□□ -0.19
TCF7-223	ENST00000522653	FKBP8	Q14318	412 aa		13.86	□□□□□ -0.19
TCF7-223	ENST00000522653	TMX4	Q9H1E5	349 aa	Predicted RBP	13.83	□□□□□ -0.2
TCF7-223	ENST00000522653	CDK11B	P21127	795 aa	Known RBP	13.83	□□□□□ -0.2
TCF7-223	ENST00000522653	CLIP1	P30622	1438 aa		13.82	□□□□□ -0.2
TCF7-223	ENST00000522653	TONSL	Q96HA7	1378 aa		13.81	□□□□□ -0.2
TCF7-223	ENST00000522653	EEA1	Q15075	1411 aa		13.8	□□□□□ -0.2
TCF7-223	ENST00000522653	KIF27	Q86VH2	1401 aa		13.79	□□□□□ -0.2
TCF7-223	ENST00000522653	CFAP53	Q96M91	514 aa		13.77	□□□□□ -0.2
TCF7-223	ENST00000522653	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	13.76	□□□□□ -0.21
TCF7-223	ENST00000522653	MYH16	Q9H6N6	1097 aa		13.76	□□□□□ -0.21
TCF7-223	ENST00000522653	CFDP1	Q9UEE9	299 aa	Predicted RBP	13.76	□□□□□ -0.21
TCF7-223	ENST00000522653	POGK	Q9P215	609 aa		13.74	□□□□□ -0.21
TCF7-223	ENST00000522653	LMOD2	Q6P5Q4	547 aa		13.74	□□□□□ -0.21
TCF7-223	ENST00000522653	WDR43	Q15061	677 aa	Known RBP eCLIP	13.73	□□□□□ -0.21
TCF7-223	ENST00000522653	EID1	Q9Y6B2	187 aa		13.72	□□□□□ -0.21
TCF7-223	ENST00000522653	PNN	Q9H307	717 aa	Known RBP	13.72	□□□□□ -0.21
TCF7-223	ENST00000522653	OSCAR	Q8IYS5	282 aa		13.7	□□□□□ -0.22
TCF7-223	ENST00000522653	MIER1	Q8N108	512 aa		13.7	□□□□□ -0.22
TCF7-223	ENST00000522653	CHMP4A	Q9BY43	222 aa		13.7	□□□□□ -0.22
TCF7-223	ENST00000522653	WRN	Q14191	1432 aa	Predicted RBP eCLIP	13.69	□□□□□ -0.22
TCF7-223	ENST00000522653	SMARCA2	P51531	1590 aa		13.68	□□□□□ -0.22
TCF7-223	ENST00000522653	NBR1	Q14596	966 aa		13.67	□□□□□ -0.22
TCF7-223	ENST00000522653	UPF2	Q9HAU5	1272 aa	Known RBP	13.66	□□□□□ -0.22
TCF7-223	ENST00000522653	CECR2	Q9BXF3	1484 aa		13.66	□□□□□ -0.22
TCF7-223	ENST00000522653	ARX	Q96QS3	562 aa		13.66	□□□□□ -0.22
TCF7-223	ENST00000522653	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	13.65	□□□□□ -0.22
TCF7-223	ENST00000522653	GOLGA2	Q08379	1002 aa		13.65	□□□□□ -0.23
TCF7-223	ENST00000522653	NUDC	Q9Y266	331 aa		13.64	□□□□□ -0.23
TCF7-223	ENST00000522653	HMGB2	P26583	209 aa	Known RBP	13.63	□□□□□ -0.23
TCF7-223	ENST00000522653	CHMP4B	Q9H444	224 aa	Known RBP	13.63	□□□□□ -0.23
TCF7-223	ENST00000522653	EFCAB2	Q5VUJ9	269 aa		13.62	□□□□□ -0.23
TCF7-223	ENST00000522653	MLEC	Q14165	292 aa		13.62	□□□□□ -0.23
TCF7-223	ENST00000522653	CCNB3	Q8WWL7	1395 aa		13.61	□□□□□ -0.23
TCF7-223	ENST00000522653	MYO15B	Q96JP2	1530 aa		13.61	□□□□□ -0.23
TCF7-223	ENST00000522653	CHIC2	Q9UKJ5	165 aa		13.61	□□□□□ -0.23
TCF7-223	ENST00000522653	CEP164	Q9UPV0	1460 aa		13.6	□□□□□ -0.23
TCF7-223	ENST00000522653	CCDC9	Q9Y3X0	531 aa	Known RBP	13.59	□□□□□ -0.23
TCF7-223	ENST00000522653	TMC1	Q8TDI8	760 aa		13.59	□□□□□ -0.23
TCF7-223	ENST00000522653	ANO8	Q9HCE9	1232 aa	Predicted RBP	13.58	□□□□□ -0.23
TCF7-223	ENST00000522653	MEX3C	Q5U5Q3	659 aa	Known RBP	13.58	□□□□□ -0.24
TCF7-223	ENST00000522653	FHAD1	B1AJZ9	1412 aa		13.57	□□□□□ -0.24
TCF7-223	ENST00000522653	PLEKHG5	O94827	1062 aa		13.57	□□□□□ -0.24
TCF7-223	ENST00000522653	ABCC8	Q09428	1581 aa		13.56	□□□□□ -0.24
TCF7-223	ENST00000522653	HSP90AA1	P07900	732 aa	Known RBP	13.55	□□□□□ -0.24
TCF7-223	ENST00000522653	CEP162	Q5TB80	1403 aa		13.55	□□□□□ -0.24
TCF7-223	ENST00000522653	ANP32B	Q92688	251 aa	Known RBP	13.54	□□□□□ -0.24
TCF7-223	ENST00000522653	KDM2A	Q9Y2K7	1162 aa		13.54	□□□□□ -0.24
TCF7-223	ENST00000522653	SUPT16H	Q9Y5B9	1047 aa	Known RBP	13.54	□□□□□ -0.24
TCF7-223	ENST00000522653	GOLGA3	Q08378	1498 aa		13.54	□□□□□ -0.24
TCF7-223	ENST00000522653	RSPH4A	Q5TD94	716 aa		13.54	□□□□□ -0.24
TCF7-223	ENST00000522653	HNRNPU	Q00839	825 aa	Known RBP eCLIP	13.54	□□□□□ -0.24
TCF7-223	ENST00000522653	MAPK8IP3	Q9UPT6	1336 aa		13.52	□□□□□ -0.24
TCF7-223	ENST00000522653	EIF4G1	Q04637	1599 aa	Known RBP	13.51	□□□□□ -0.25
TCF7-223	ENST00000522653	WASHC2A	Q641Q2	1341 aa		13.51	□□□□□ -0.25
TCF7-223	ENST00000522653	CSB-PGBD3	P0DP91	1061 aa		13.51	□□□□□ -0.25
TCF7-223	ENST00000522653	KNSTRN	Q9Y448	316 aa		13.48	□□□□□ -0.25
TCF7-223	ENST00000522653	DDX10	Q13206	875 aa	Known RBP	13.48	□□□□□ -0.25
TCF7-223	ENST00000522653	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	13.47	□□□□□ -0.25
TCF7-223	ENST00000522653	CCDC136	Q96JN2	1154 aa		13.47	□□□□□ -0.25
TCF7-223	ENST00000522653	PHF23	Q9BUL5	403 aa	Predicted RBP	13.47	□□□□□ -0.25
TCF7-223	ENST00000522653	MS4A1	P11836	297 aa		13.46	□□□□□ -0.26
TCF7-223	ENST00000522653	CASC1	Q6TDU7	716 aa		13.46	□□□□□ -0.26
TCF7-223	ENST00000522653	HDAC5	Q9UQL6	1122 aa		13.46	□□□□□ -0.26
TCF7-223	ENST00000522653		G3V3G9	751 aa		13.44	□□□□□ -0.26
TCF7-223	ENST00000522653	DCAF8	Q5TAQ9	597 aa		13.44	□□□□□ -0.26
TCF7-223	ENST00000522653	SOGA1	O94964	1423 aa		13.44	□□□□□ -0.26
TCF7-223	ENST00000522653	SF3B2	Q13435	895 aa	Known RBP	13.44	□□□□□ -0.26
TCF7-223	ENST00000522653	GGT6	Q6P531	493 aa		13.44	□□□□□ -0.26
TCF7-223	ENST00000522653	CARMIL1	Q5VZK9	1371 aa		13.43	□□□□□ -0.26
TCF7-223	ENST00000522653	TNIK	Q9UKE5	1360 aa		13.43	□□□□□ -0.26
TCF7-223	ENST00000522653	DEK	P35659	375 aa	Known RBP	13.42	□□□□□ -0.26
TCF7-223	ENST00000522653	CUX2	O14529	1486 aa		13.41	□□□□□ -0.26
TCF7-223	ENST00000522653	CYB5RL	Q6IPT4	315 aa		13.4	□□□□□ -0.26
TCF7-223	ENST00000522653	NOP58	Q9Y2X3	529 aa	Known RBP	13.39	□□□□□ -0.27
TCF7-223	ENST00000522653	ERICH6B	Q5W0A0	696 aa		13.39	□□□□□ -0.27
TCF7-223	ENST00000522653	RTF1	Q92541	710 aa	Known RBP	13.39	□□□□□ -0.27
TCF7-223	ENST00000522653	SRPK2	P78362	688 aa	Known RBP	13.38	□□□□□ -0.27
TCF7-223	ENST00000522653	DDRGK1	Q96HY6	314 aa		13.38	□□□□□ -0.27
TCF7-223	ENST00000522653	RRP7BP	Q9NSQ0	103 aa		13.38	□□□□□ -0.27
TCF7-223	ENST00000522653	CADPS	Q9ULU8	1353 aa		13.38	□□□□□ -0.27
TCF7-223	ENST00000522653	PPM1G	O15355	546 aa	Predicted RBP	13.38	□□□□□ -0.27
TCF7-223	ENST00000522653	CALD1	Q05682	793 aa	Known RBP	13.38	□□□□□ -0.27
TCF7-223	ENST00000522653	RGL3	Q3MIN7	710 aa		13.37	□□□□□ -0.27
TCF7-223	ENST00000522653	SENP3	Q9H4L4	574 aa	Predicted RBP	13.37	□□□□□ -0.27
TCF7-223	ENST00000522653	RBM19	Q9Y4C8	960 aa	Known RBP	13.37	□□□□□ -0.27
TCF7-223	ENST00000522653	TSHZ2	Q9NRE2	1034 aa		13.36	□□□□□ -0.27
TCF7-223	ENST00000522653	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	13.35	□□□□□ -0.27
TCF7-223	ENST00000522653	IRX6	P78412	446 aa	Predicted RBP	13.35	□□□□□ -0.27
TCF7-223	ENST00000522653	EIF3A	Q14152	1382 aa	Known RBP	13.35	□□□□□ -0.27
TCF7-223	ENST00000522653	ZRSR1	Q15695	479 aa	Known RBP	13.35	□□□□□ -0.27
TCF7-223	ENST00000522653	PAK3	O75914	559 aa	Predicted RBP	13.34	□□□□□ -0.27
TCF7-223	ENST00000522653	RTN4	Q9NQC3	1192 aa	Known RBP	13.34	□□□□□ -0.27
TCF7-223	ENST00000522653	NCL	P19338	710 aa	Known RBP	13.34	□□□□□ -0.27
TCF7-223	ENST00000522653	FAM9B	Q8IZU0	186 aa		13.34	□□□□□ -0.27
TCF7-223	ENST00000522653	CFAP44	Q96MT7	982 aa		13.34	□□□□□ -0.27
TCF7-223	ENST00000522653	SPAG9	O60271	1321 aa	Known RBP	13.33	□□□□□ -0.27
TCF7-223	ENST00000522653	FMN1	Q68DA7	1419 aa		13.33	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 211.9 ms