RNA–Protein interactions for RNA: ENST00000522020.1

MCPH1-206, Transcript of microcephalin 1, humanhuman

TSL 3

Gene MCPH1, Length 470 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCPH1-206ENST00000522020 ATN1P54259 1190 aaPredicted RBP7.73□□□□□ -1.17
MCPH1-206ENST00000522020 PABPN1Q86U42 306 aaKnown RBP eCLIP7.73□□□□□ -1.17
MCPH1-206ENST00000522020 MARVELD3Q96A59 401 aa7.73□□□□□ -1.17
MCPH1-206ENST00000522020 FBLN2P98095 1184 aa7.71□□□□□ -1.18
MCPH1-206ENST00000522020 KRTAP3-3Q9BYR6 98 aa7.7□□□□□ -1.18
MCPH1-206ENST00000522020 KRTAP3-2Q9BYR7 98 aa7.7□□□□□ -1.18
MCPH1-206ENST00000522020 SLAIN1Q8ND83 568 aa7.68□□□□□ -1.18
MCPH1-206ENST00000522020 MKRN4PQ13434 485 aaPredicted RBP7.66□□□□□ -1.18
MCPH1-206ENST00000522020 COLQQ9Y215 455 aaPredicted RBP7.64□□□□□ -1.19
MCPH1-206ENST00000522020 PAK3O75914 559 aaPredicted RBP7.62□□□□□ -1.19
MCPH1-206ENST00000522020 TMEM121BQ9BXQ6 578 aaPredicted RBP7.61□□□□□ -1.19
MCPH1-206ENST00000522020 POTEB3A0JP26 581 aa7.6□□□□□ -1.19
MCPH1-206ENST00000522020 POTEBQ6S5H4 581 aa7.6□□□□□ -1.19
MCPH1-206ENST00000522020 CREBZFQ9NS37 354 aa7.6□□□□□ -1.19
MCPH1-206ENST00000522020 RNF166Q96A37 237 aaPredicted RBP7.53□□□□□ -1.2
MCPH1-206ENST00000522020 SEC24BO95487 1268 aa7.52□□□□□ -1.21
MCPH1-206ENST00000522020 BMP2KQ9NSY1 1161 aaPredicted RBP7.52□□□□□ -1.21
MCPH1-206ENST00000522020 TRPC6Q9Y210 931 aa7.51□□□□□ -1.21
MCPH1-206ENST00000522020 HS3ST6Q96QI5 342 aa7.5□□□□□ -1.21
MCPH1-206ENST00000522020 FOXD4L1Q9NU39 408 aa7.49□□□□□ -1.21
MCPH1-206ENST00000522020 EMP3P54852 163 aa7.47□□□□□ -1.21
MCPH1-206ENST00000522020 FAM205CA6NFA0 338 aa7.46□□□□□ -1.22
MCPH1-206ENST00000522020 SNPHO15079 494 aa7.38□□□□□ -1.23
MCPH1-206ENST00000522020 MYT1LQ9UL68 1186 aa7.36□□□□□ -1.23
MCPH1-206ENST00000522020 TTLL13PA6NNM8 815 aa7.32□□□□□ -1.24
MCPH1-206ENST00000522020 TIE1P35590 1138 aa7.32□□□□□ -1.24
MCPH1-206ENST00000522020 ATXN8OSP0DMR3 200 aa7.31□□□□□ -1.24
MCPH1-206ENST00000522020 SLC4A1APQ9BWU0 796 aaKnown RBP7.31□□□□□ -1.24
MCPH1-206ENST00000522020 MNX1P50219 401 aaPredicted RBP7.3□□□□□ -1.24
MCPH1-206ENST00000522020 NPM1P06748 294 aaKnown RBP eCLIP7.29□□□□□ -1.24
MCPH1-206ENST00000522020 KIF12Q96FN5 646 aa7.29□□□□□ -1.24
MCPH1-206ENST00000522020 TSPYL2Q9H2G4 693 aaPredicted RBP7.28□□□□□ -1.24
MCPH1-206ENST00000522020 TRIM35Q9UPQ4 493 aa7.28□□□□□ -1.24
MCPH1-206ENST00000522020 ZBTB22O15209 634 aa7.26□□□□□ -1.25
MCPH1-206ENST00000522020 IER5LQ5T953 404 aa7.26□□□□□ -1.25
MCPH1-206ENST00000522020 CCDC61Q9Y6R9 512 aa7.25□□□□□ -1.25
MCPH1-206ENST00000522020 PLA2G2EQ9NZK7 142 aa7.23□□□□□ -1.25
MCPH1-206ENST00000522020 MAP3K13O43283 966 aa7.21□□□□□ -1.26
MCPH1-206ENST00000522020 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.2□□□□□ -1.26
MCPH1-206ENST00000522020 PLCG2P16885 1265 aa7.19□□□□□ -1.26
MCPH1-206ENST00000522020 IRX5P78411 483 aaPredicted RBP7.12□□□□□ -1.27
MCPH1-206ENST00000522020 IRX2Q9BZI1 471 aaPredicted RBP7.1□□□□□ -1.27
MCPH1-206ENST00000522020 STAG3Q9UJ98 1225 aa7.1□□□□□ -1.27
MCPH1-206ENST00000522020 ERBB3P21860 1342 aa7.06□□□□□ -1.28
MCPH1-206ENST00000522020 OCEL1Q9H607 264 aa7.01□□□□□ -1.29
MCPH1-206ENST00000522020 PTGER2P43116 358 aa7□□□□□ -1.29
MCPH1-206ENST00000522020 VARS2Q5ST30 1063 aaKnown RBP7□□□□□ -1.29
MCPH1-206ENST00000522020 TMEM106CQ9BVX2 250 aa6.98□□□□□ -1.29
MCPH1-206ENST00000522020 HOXB3P14651 431 aaPredicted RBP6.97□□□□□ -1.29
MCPH1-206ENST00000522020 HOXB1P14653 301 aaPredicted RBP6.97□□□□□ -1.29
MCPH1-206ENST00000522020 ANKRD13DQ6ZTN6 518 aa6.97□□□□□ -1.29
MCPH1-206ENST00000522020 LOC100996750A0A140TA64 210 aa6.96□□□□□ -1.3
MCPH1-206ENST00000522020 KRTAP4-6Q9BYQ5 205 aa6.96□□□□□ -1.3
MCPH1-206ENST00000522020 C3orf67Q6ZVT6 689 aa6.95□□□□□ -1.3
MCPH1-206ENST00000522020 PCDHB13Q9Y5F0 798 aa6.93□□□□□ -1.3
MCPH1-206ENST00000522020 ZNF687Q8N1G0 1237 aa6.92□□□□□ -1.3
MCPH1-206ENST00000522020 Q6ZNB5 142 aa6.9□□□□□ -1.3
MCPH1-206ENST00000522020 IFNL1Q8IU54 200 aa6.9□□□□□ -1.3
MCPH1-206ENST00000522020 HCSTQ9UBK5 93 aa6.89□□□□□ -1.31
MCPH1-206ENST00000522020 RASEFQ8IZ41 740 aa6.87□□□□□ -1.31
MCPH1-206ENST00000522020 ZNF710Q8N1W2 664 aa6.86□□□□□ -1.31
MCPH1-206ENST00000522020 PDCD7Q8N8D1 485 aaKnown RBP6.84□□□□□ -1.31
MCPH1-206ENST00000522020 SGIP1Q9BQI5 828 aa6.84□□□□□ -1.31
MCPH1-206ENST00000522020 LCE2BO14633 110 aa6.83□□□□□ -1.32
MCPH1-206ENST00000522020 RGS20O76081 388 aa6.81□□□□□ -1.32
MCPH1-206ENST00000522020 LSM11P83369 360 aaKnown RBP eCLIP6.78□□□□□ -1.32
MCPH1-206ENST00000522020 L3MBTL3Q96JM7 780 aaPredicted RBP6.77□□□□□ -1.33
MCPH1-206ENST00000522020 DOK7Q18PE1 504 aa6.73□□□□□ -1.33
MCPH1-206ENST00000522020 SPDYE4A6NLX3 237 aa6.71□□□□□ -1.34
MCPH1-206ENST00000522020 ZNF775Q96BV0 537 aaPredicted RBP6.69□□□□□ -1.34
MCPH1-206ENST00000522020 CSRNP3Q8WYN3 585 aa6.67□□□□□ -1.34
MCPH1-206ENST00000522020 A0A0G2JS52 829 aa6.66□□□□□ -1.34
MCPH1-206ENST00000522020 TRAF7Q6Q0C0 670 aa6.66□□□□□ -1.34
MCPH1-206ENST00000522020 POTEEQ6S8J3 1075 aa6.66□□□□□ -1.34
MCPH1-206ENST00000522020 EHMT2Q96KQ7 1210 aa6.65□□□□□ -1.34
MCPH1-206ENST00000522020 RIMBP2O15034 1052 aa6.63□□□□□ -1.35
MCPH1-206ENST00000522020 DPY19L2Q6NUT2 758 aa6.63□□□□□ -1.35
MCPH1-206ENST00000522020 GPR153Q6NV75 609 aa6.63□□□□□ -1.35
MCPH1-206ENST00000522020 AXIN2Q9Y2T1 843 aa6.61□□□□□ -1.35
MCPH1-206ENST00000522020 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.59□□□□□ -1.35
MCPH1-206ENST00000522020 ZNF787Q6DD87 383 aa6.58□□□□□ -1.36
MCPH1-206ENST00000522020 IFFO2Q5TF58 517 aa6.57□□□□□ -1.36
MCPH1-206ENST00000522020 KCTD12Q96CX2 325 aaKnown RBP6.57□□□□□ -1.36
MCPH1-206ENST00000522020 PCDHB8Q9UN66 801 aa6.55□□□□□ -1.36
MCPH1-206ENST00000522020 ZNF316A6NFI3 1004 aaPredicted RBP6.54□□□□□ -1.36
MCPH1-206ENST00000522020 MKRN3Q13064 507 aaKnown RBP6.54□□□□□ -1.36
MCPH1-206ENST00000522020 ARSIQ5FYB1 569 aa6.54□□□□□ -1.36
MCPH1-206ENST00000522020 KHSRPQ92945 711 aaKnown RBP eCLIP6.54□□□□□ -1.36
MCPH1-206ENST00000522020 ZSWIM6Q9HCJ5 1215 aa6.54□□□□□ -1.36
MCPH1-206ENST00000522020 ADGRD1Q6QNK2 874 aa6.52□□□□□ -1.37
MCPH1-206ENST00000522020 PROM2Q8N271 834 aa6.52□□□□□ -1.37
MCPH1-206ENST00000522020 BOLA1Q9Y3E2 137 aa6.52□□□□□ -1.37
MCPH1-206ENST00000522020 PTPN5P54829 565 aa6.5□□□□□ -1.37
MCPH1-206ENST00000522020 GFRA3O60609 400 aa6.47□□□□□ -1.37
MCPH1-206ENST00000522020 PBX2P40425 430 aa6.47□□□□□ -1.37
MCPH1-206ENST00000522020 NUBP1P53384 320 aa6.47□□□□□ -1.37
MCPH1-206ENST00000522020 GOLGA2Q08379 1002 aa6.47□□□□□ -1.37
MCPH1-206ENST00000522020 G3V3G9 751 aa6.46□□□□□ -1.38
MCPH1-206ENST00000522020 DCAF8Q5TAQ9 597 aa6.46□□□□□ -1.38
MCPH1-206ENST00000522020 ILDR1Q86SU0 546 aaPredicted RBP6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms