RNA–Protein interactions for RNA: ENST00000520539.5

UBR5-207, Transcript of ubiquitin protein ligase E3 component n-recognin 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UBR5, Length 10,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR5-207ENST00000520539 CHMP4BQ9H444 224 aaKnown RBP20.07■□□□□ 0.8
UBR5-207ENST00000520539 WDR43Q15061 677 aaKnown RBP eCLIP20.05■□□□□ 0.85e-12■□□□□ 10
UBR5-207ENST00000520539 CFAP44Q96MT7 982 aa20.05■□□□□ 0.8
UBR5-207ENST00000520539 RSPH6AQ9H0K4 717 aa20.04■□□□□ 0.8
UBR5-207ENST00000520539 LAS1LQ9Y4W2 734 aaKnown RBP20.02■□□□□ 0.8
UBR5-207ENST00000520539 TMC1Q8TDI8 760 aa20.02■□□□□ 0.79
UBR5-207ENST00000520539 CCDC180Q9P1Z9 1646 aa19.98■□□□□ 0.79
UBR5-207ENST00000520539 GOLGA6L3A6NEY3 463 aa19.95■□□□□ 0.78
UBR5-207ENST00000520539 SYAP1Q96A49 352 aaPredicted RBP19.95■□□□□ 0.78
UBR5-207ENST00000520539 DRC7Q8IY82 874 aa19.94■□□□□ 0.78
UBR5-207ENST00000520539 DCAF1Q9Y4B6 1507 aa19.93■□□□□ 0.78
UBR5-207ENST00000520539 HSP90AA2PQ14568 343 aaPredicted RBP19.93■□□□□ 0.78
UBR5-207ENST00000520539 RTN4Q9NQC3 1192 aaKnown RBP19.93■□□□□ 0.78
UBR5-207ENST00000520539 LOC105371045A0A1W2PR82 267 aa19.89■□□□□ 0.77
UBR5-207ENST00000520539 HSCBQ8IWL3 235 aa19.89■□□□□ 0.77
UBR5-207ENST00000520539 FAM9BQ8IZU0 186 aa19.88■□□□□ 0.77
UBR5-207ENST00000520539 HSP90AB1P08238 724 aaKnown RBP19.87■□□□□ 0.77
UBR5-207ENST00000520539 NOM1Q5C9Z4 860 aaKnown RBP19.86■□□□□ 0.77
UBR5-207ENST00000520539 PLCB2Q00722 1185 aa19.85■□□□□ 0.77
UBR5-207ENST00000520539 DEKP35659 375 aaKnown RBP19.84■□□□□ 0.77
UBR5-207ENST00000520539 GBP4Q96PP9 640 aa19.84■□□□□ 0.77
UBR5-207ENST00000520539 GPS2Q13227 327 aa19.83■□□□□ 0.77
UBR5-207ENST00000520539 CCDC34Q96HJ3 373 aa19.83■□□□□ 0.77
UBR5-207ENST00000520539 MS4A1P11836 297 aa19.83■□□□□ 0.77
UBR5-207ENST00000520539 FTSJ3Q8IY81 847 aaKnown RBP19.82■□□□□ 0.76
UBR5-207ENST00000520539 MRS2Q9HD23 443 aa19.82■□□□□ 0.76
UBR5-207ENST00000520539 SCAF1Q9H7N4 1312 aaKnown RBP19.82■□□□□ 0.76
UBR5-207ENST00000520539 HTATSF1O43719 755 aaKnown RBP19.82■□□□□ 0.76
UBR5-207ENST00000520539 PHF14O94880 888 aa19.82■□□□□ 0.76
UBR5-207ENST00000520539 APPP05067 770 aa19.82■□□□□ 0.76
UBR5-207ENST00000520539 MCCP23508 829 aa19.8■□□□□ 0.76
UBR5-207ENST00000520539 TPM4P67936 248 aa19.8■□□□□ 0.76
UBR5-207ENST00000520539 FGD1P98174 961 aa19.75■□□□□ 0.75
UBR5-207ENST00000520539 TEX35Q5T0J7 233 aa19.74■□□□□ 0.75
UBR5-207ENST00000520539 RRP12Q5JTH9 1297 aaKnown RBP19.72■□□□□ 0.75
UBR5-207ENST00000520539 CCDC70Q6NSX1 233 aa19.72■□□□□ 0.75
UBR5-207ENST00000520539 HMMRO75330 724 aa19.7■□□□□ 0.74
UBR5-207ENST00000520539 MTERF4Q7Z6M4 381 aaKnown RBP19.69■□□□□ 0.74
UBR5-207ENST00000520539 STK11IPQ8N1F8 1099 aa19.69■□□□□ 0.74
UBR5-207ENST00000520539 CSPP1Q1MSJ5 1256 aa19.68■□□□□ 0.74
UBR5-207ENST00000520539 PPP4R2Q9NY27 417 aa19.68■□□□□ 0.74
UBR5-207ENST00000520539 ESF1Q9H501 851 aaKnown RBP19.65■□□□□ 0.74
UBR5-207ENST00000520539 CALD1Q05682 793 aaKnown RBP19.64■□□□□ 0.73
UBR5-207ENST00000520539 CWC15Q9P013 229 aaKnown RBP19.62■□□□□ 0.73
UBR5-207ENST00000520539 GNL2Q13823 731 aaKnown RBP19.62■□□□□ 0.73
UBR5-207ENST00000520539 TPM3P06753 285 aa19.61■□□□□ 0.73
UBR5-207ENST00000520539 CLSTN1O94985 981 aa19.61■□□□□ 0.73
UBR5-207ENST00000520539 CFAP53Q96M91 514 aa19.61■□□□□ 0.73
UBR5-207ENST00000520539 KCNJ4P48050 445 aa19.61■□□□□ 0.73
UBR5-207ENST00000520539 DDX10Q13206 875 aaKnown RBP19.59■□□□□ 0.73
UBR5-207ENST00000520539 HSP90B1P14625 803 aaKnown RBP19.59■□□□□ 0.73
UBR5-207ENST00000520539 CDCA8Q53HL2 280 aa19.58■□□□□ 0.72
UBR5-207ENST00000520539 ZNF771Q7L3S4 317 aaPredicted RBP19.57■□□□□ 0.72
UBR5-207ENST00000520539 CCDC191Q8NCU4 936 aa19.55■□□□□ 0.72
UBR5-207ENST00000520539 MAP7D2Q96T17 732 aa19.53■□□□□ 0.72
UBR5-207ENST00000520539 CDR1P51861 262 aa19.53■□□□□ 0.72
UBR5-207ENST00000520539 STAG3Q9UJ98 1225 aa19.52■□□□□ 0.72
UBR5-207ENST00000520539 CCDC66A2RUB6 948 aa19.52■□□□□ 0.72
UBR5-207ENST00000520539 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.52■□□□□ 0.72
UBR5-207ENST00000520539 DCTN1Q14203 1278 aa19.51■□□□□ 0.71
UBR5-207ENST00000520539 CEP89Q96ST8 783 aa19.51■□□□□ 0.71
UBR5-207ENST00000520539 TULP1O00294 542 aaPredicted RBP19.51■□□□□ 0.71
UBR5-207ENST00000520539 VSIG10Q8N0Z9 540 aa19.5■□□□□ 0.71
UBR5-207ENST00000520539 NEFHP12036 1026 aa19.5■□□□□ 0.71
UBR5-207ENST00000520539 ACBD3Q9H3P7 528 aa19.49■□□□□ 0.71
UBR5-207ENST00000520539 DDX11L8A8MPP1 907 aa19.49■□□□□ 0.71
UBR5-207ENST00000520539 HAP1P54257 671 aaPredicted RBP19.48■□□□□ 0.71
UBR5-207ENST00000520539 TPRNQ4KMQ1 711 aa19.48■□□□□ 0.71
UBR5-207ENST00000520539 TAF3Q5VWG9 929 aa19.47■□□□□ 0.71
UBR5-207ENST00000520539 RDXP35241 583 aaKnown RBP19.47■□□□□ 0.71
UBR5-207ENST00000520539 PRM3Q9NNZ6 103 aa19.47■□□□□ 0.71
UBR5-207ENST00000520539 SALL2Q9Y467 1007 aaPredicted RBP19.46■□□□□ 0.71
UBR5-207ENST00000520539 ARID3AQ99856 593 aa19.45■□□□□ 0.7
UBR5-207ENST00000520539 GOLGA2Q08379 1002 aa19.44■□□□□ 0.7
UBR5-207ENST00000520539 AK7Q96M32 723 aa19.44■□□□□ 0.7
UBR5-207ENST00000520539 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.43■□□□□ 0.7
UBR5-207ENST00000520539 EIF4G2P78344 907 aaKnown RBP eCLIP19.43■□□□□ 0.7
UBR5-207ENST00000520539 IRX6P78412 446 aaPredicted RBP19.43■□□□□ 0.7
UBR5-207ENST00000520539 TSR1Q2NL82 804 aaKnown RBP19.43■□□□□ 0.7
UBR5-207ENST00000520539 KIAA1211Q6ZU35 1233 aa19.43■□□□□ 0.7
UBR5-207ENST00000520539 TPM1P09493 284 aa19.42■□□□□ 0.7
UBR5-207ENST00000520539 OS9Q13438 667 aaPredicted RBP19.41■□□□□ 0.7
UBR5-207ENST00000520539 KIF16BQ96L93 1317 aa19.41■□□□□ 0.7
UBR5-207ENST00000520539 ARGLU1Q9NWB6 273 aaPredicted RBP19.4■□□□□ 0.7
UBR5-207ENST00000520539 KIF3AQ9Y496 699 aa19.4■□□□□ 0.7
UBR5-207ENST00000520539 INCENPQ9NQS7 918 aa19.39■□□□□ 0.7
UBR5-207ENST00000520539 RGS3P49796 1198 aa19.39■□□□□ 0.69
UBR5-207ENST00000520539 NAP1L2Q9ULW6 460 aaPredicted RBP19.39■□□□□ 0.69
UBR5-207ENST00000520539 SKOR2Q2VWA4 1001 aaPredicted RBP19.38■□□□□ 0.69
UBR5-207ENST00000520539 KNSTRNQ9Y448 316 aa19.38■□□□□ 0.69
UBR5-207ENST00000520539 MAPK8IP3Q9UPT6 1336 aa19.37■□□□□ 0.69
UBR5-207ENST00000520539 CHMP4CQ96CF2 233 aa19.37■□□□□ 0.69
UBR5-207ENST00000520539 NEXNQ0ZGT2 675 aa19.36■□□□□ 0.69
UBR5-207ENST00000520539 CAGE1Q8TC20 777 aa19.35■□□□□ 0.69
UBR5-207ENST00000520539 ATP6V1DQ9Y5K8 247 aa19.35■□□□□ 0.69
UBR5-207ENST00000520539 HSP90B2PQ58FF3 399 aa19.35■□□□□ 0.69
UBR5-207ENST00000520539 PKNOX2Q96KN3 472 aa19.35■□□□□ 0.69
UBR5-207ENST00000520539 RUFY1Q96T51 708 aa19.33■□□□□ 0.68
UBR5-207ENST00000520539 TCERG1O14776 1098 aaKnown RBP19.32■□□□□ 0.68
UBR5-207ENST00000520539 TPM2P07951 284 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms