RNA–Protein interactions for RNA: ENST00000520539.5

UBR5-207, Transcript of ubiquitin protein ligase E3 component n-recognin 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UBR5, Length 10,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR5-207ENST00000520539 PELP1Q8IZL8 1130 aaKnown RBP26.34■■□□□ 1.81
UBR5-207ENST00000520539 MYT1Q01538 1121 aa25.73■■□□□ 1.71
UBR5-207ENST00000520539 CCER1Q8TC90 406 aaPredicted RBP24.9■■□□□ 1.58
UBR5-207ENST00000520539 ERICH6Q7L0X2 663 aa24.67■■□□□ 1.54
UBR5-207ENST00000520539 YTHDC1Q96MU7 727 aaKnown RBP24.45■■□□□ 1.5
UBR5-207ENST00000520539 CENPBP07199 599 aaPredicted RBP24.21■■□□□ 1.47
UBR5-207ENST00000520539 TTBK1Q5TCY1 1321 aaPredicted RBP24.19■■□□□ 1.46
UBR5-207ENST00000520539 NEFLP07196 543 aa23.69■■□□□ 1.38
UBR5-207ENST00000520539 ZEB1P37275 1124 aaPredicted RBP23.63■■□□□ 1.37
UBR5-207ENST00000520539 DCAF8L2P0C7V8 631 aa23.57■■□□□ 1.36
UBR5-207ENST00000520539 APLP2Q06481 763 aa23.54■■□□□ 1.36
UBR5-207ENST00000520539 DAXXQ9UER7 740 aaPredicted RBP23.46■■□□□ 1.35
UBR5-207ENST00000520539 FAM9AQ8IZU1 332 aaPredicted RBP23.27■■□□□ 1.32
UBR5-207ENST00000520539 RTL5Q5HYW3 569 aaPredicted RBP23.06■■□□□ 1.28
UBR5-207ENST00000520539 SUPT5HO00267 1087 aaKnown RBP22.98■■□□□ 1.27
UBR5-207ENST00000520539 GLIPR1L2Q4G1C9 344 aa22.79■■□□□ 1.24
UBR5-207ENST00000520539 ZNF316A6NFI3 1004 aaPredicted RBP22.79■■□□□ 1.24
UBR5-207ENST00000520539 PCGF6Q9BYE7 350 aa22.68■■□□□ 1.22
UBR5-207ENST00000520539 CLSPNQ9HAW4 1339 aa22.41■■□□□ 1.18
UBR5-207ENST00000520539 MYT1LQ9UL68 1186 aa22.27■■□□□ 1.16
UBR5-207ENST00000520539 EHMT2Q96KQ7 1210 aa22.24■■□□□ 1.15
UBR5-207ENST00000520539 ANP32BQ92688 251 aaKnown RBP22.08■■□□□ 1.13
UBR5-207ENST00000520539 SHROOM4Q9ULL8 1493 aa21.96■■□□□ 1.11
UBR5-207ENST00000520539 EIF5BO60841 1220 aaKnown RBP21.87■■□□□ 1.09
UBR5-207ENST00000520539 CDK11AQ9UQ88 783 aaPredicted RBP21.82■■□□□ 1.08
UBR5-207ENST00000520539 ANP32AP39687 249 aaKnown RBP21.79■■□□□ 1.08
UBR5-207ENST00000520539 HRCP23327 699 aa21.79■■□□□ 1.08
UBR5-207ENST00000520539 TRIM26Q12899 539 aaPredicted RBP21.78■■□□□ 1.08
UBR5-207ENST00000520539 ZBTB47Q9UFB7 747 aaPredicted RBP21.77■■□□□ 1.08
UBR5-207ENST00000520539 TNNT2P45379 298 aaPredicted RBP21.74■■□□□ 1.07
UBR5-207ENST00000520539 RANGAP1P46060 587 aaPredicted RBP21.68■■□□□ 1.06
UBR5-207ENST00000520539 TRIM41Q8WV44 630 aa21.6■■□□□ 1.05
UBR5-207ENST00000520539 NISCHQ9Y2I1 1504 aa21.59■■□□□ 1.05
UBR5-207ENST00000520539 UBTFP17480 764 aaKnown RBP21.57■■□□□ 1.04
UBR5-207ENST00000520539 ATP1B4Q9UN42 357 aaPredicted RBP21.54■■□□□ 1.04
UBR5-207ENST00000520539 NEFMP07197 916 aa21.52■■□□□ 1.04
UBR5-207ENST00000520539 DIEXFQ68CQ4 756 aaKnown RBP21.49■■□□□ 1.03
UBR5-207ENST00000520539 TRIM44Q96DX7 344 aaPredicted RBP21.43■■□□□ 1.02
UBR5-207ENST00000520539 POLR3GLQ9BT43 218 aa21.37■■□□□ 1.01
UBR5-207ENST00000520539 UPF2Q9HAU5 1272 aaKnown RBP21.37■■□□□ 1.01
UBR5-207ENST00000520539 HSP90AA1P07900 732 aaKnown RBP21.36■■□□□ 1.01
UBR5-207ENST00000520539 NCLP19338 710 aaKnown RBP21.35■■□□□ 1.01
UBR5-207ENST00000520539 CDK11BP21127 795 aaKnown RBP21.34■■□□□ 1.01
UBR5-207ENST00000520539 ANP32EQ9BTT0 268 aa21.29■■□□□ 1
UBR5-207ENST00000520539 CANXP27824 592 aaKnown RBP21.28■■□□□ 1
UBR5-207ENST00000520539 GTF3C3Q9Y5Q9 886 aa21.26■□□□□ 0.99
UBR5-207ENST00000520539 ANP32CO43423 234 aa21.18■□□□□ 0.98
UBR5-207ENST00000520539 SLC4A1APQ9BWU0 796 aaKnown RBP21.13■□□□□ 0.97
UBR5-207ENST00000520539 ERICH6BQ5W0A0 696 aa21.01■□□□□ 0.95
UBR5-207ENST00000520539 BCANQ96GW7 911 aa21■□□□□ 0.95
UBR5-207ENST00000520539 ACIN1Q9UKV3 1341 aaKnown RBP20.92■□□□□ 0.94
UBR5-207ENST00000520539 GOLGA6L22H0YM25 854 aa20.86■□□□□ 0.93
UBR5-207ENST00000520539 NPM2Q86SE8 214 aaKnown RBP20.86■□□□□ 0.93
UBR5-207ENST00000520539 BECN1Q14457 450 aa20.83■□□□□ 0.92
UBR5-207ENST00000520539 DDRGK1Q96HY6 314 aa20.82■□□□□ 0.92
UBR5-207ENST00000520539 ITGAEP38570 1179 aa20.78■□□□□ 0.92
UBR5-207ENST00000520539 CNGB1Q14028 1251 aaPredicted RBP20.77■□□□□ 0.92
UBR5-207ENST00000520539 GOLGA6L6A8MZA4 724 aa20.76■□□□□ 0.91
UBR5-207ENST00000520539 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.75■□□□□ 0.91
UBR5-207ENST00000520539 CHAF1AQ13111 956 aaPredicted RBP20.73■□□□□ 0.91
UBR5-207ENST00000520539 NBR1Q14596 966 aa20.73■□□□□ 0.91
UBR5-207ENST00000520539 ZNF326Q5BKZ1 582 aaKnown RBP20.73■□□□□ 0.91
UBR5-207ENST00000520539 NRDCO43847 1150 aa20.7■□□□□ 0.9
UBR5-207ENST00000520539 ZRSR1Q15695 479 aaKnown RBP20.69■□□□□ 0.9
UBR5-207ENST00000520539 HNRNPUL2Q1KMD3 747 aaKnown RBP20.69■□□□□ 0.9
UBR5-207ENST00000520539 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.68■□□□□ 0.9
UBR5-207ENST00000520539 PTMAP06454 111 aaKnown RBP20.64■□□□□ 0.9
UBR5-207ENST00000520539 DNTTIP2Q5QJE6 756 aaKnown RBP20.64■□□□□ 0.9
UBR5-207ENST00000520539 NAP1L5Q96NT1 182 aaPredicted RBP20.63■□□□□ 0.89
UBR5-207ENST00000520539 L1TD1Q5T7N2 865 aaKnown RBP20.63■□□□□ 0.89
UBR5-207ENST00000520539 CALRP27797 417 aaKnown RBP20.6■□□□□ 0.89
UBR5-207ENST00000520539 PTMSP20962 102 aa20.58■□□□□ 0.89
UBR5-207ENST00000520539 PPARGC1BQ86YN6 1023 aaKnown RBP20.58■□□□□ 0.88
UBR5-207ENST00000520539 MYH16Q9H6N6 1097 aa20.57■□□□□ 0.88
UBR5-207ENST00000520539 SLC24A1O60721 1099 aa20.54■□□□□ 0.88
UBR5-207ENST00000520539 CCDC136Q96JN2 1154 aa20.52■□□□□ 0.88
UBR5-207ENST00000520539 ARXQ96QS3 562 aa20.5■□□□□ 0.87
UBR5-207ENST00000520539 PPM1GO15355 546 aaPredicted RBP20.49■□□□□ 0.87
UBR5-207ENST00000520539 USP35Q9P2H5 1018 aa20.49■□□□□ 0.87
UBR5-207ENST00000520539 TNNT3P45378 269 aaPredicted RBP20.46■□□□□ 0.87
UBR5-207ENST00000520539 BCL11AQ9H165 835 aa20.46■□□□□ 0.87
UBR5-207ENST00000520539 FKBP8Q14318 412 aa20.45■□□□□ 0.86
UBR5-207ENST00000520539 CASC1Q6TDU7 716 aa20.4■□□□□ 0.86
UBR5-207ENST00000520539 TRIM52Q96A61 297 aa20.39■□□□□ 0.85
UBR5-207ENST00000520539 FAM50AQ14320 339 aaKnown RBP20.37■□□□□ 0.85
UBR5-207ENST00000520539 CHIC1Q5VXU3 224 aa20.37■□□□□ 0.85
UBR5-207ENST00000520539 MSNP26038 577 aaKnown RBP20.36■□□□□ 0.85
UBR5-207ENST00000520539 ARID4BQ4LE39 1312 aaPredicted RBP20.34■□□□□ 0.85
UBR5-207ENST00000520539 SETQ01105 290 aaPredicted RBP20.32■□□□□ 0.84
UBR5-207ENST00000520539 NEUROD1Q13562 356 aa20.31■□□□□ 0.84
UBR5-207ENST00000520539 GOLGA6L1Q8N7Z2 621 aa20.23■□□□□ 0.83
UBR5-207ENST00000520539 HNRNPUQ00839 825 aaKnown RBP eCLIP20.22■□□□□ 0.83
UBR5-207ENST00000520539 A0A0U1RQG5 324 aaPredicted RBP20.19■□□□□ 0.82
UBR5-207ENST00000520539 KIAA2012Q0VF49 1180 aa20.16■□□□□ 0.82
UBR5-207ENST00000520539 TONSLQ96HA7 1378 aa20.15■□□□□ 0.82
UBR5-207ENST00000520539 PNNQ9H307 717 aaKnown RBP20.13■□□□□ 0.81
UBR5-207ENST00000520539 NOP58Q9Y2X3 529 aaKnown RBP20.11■□□□□ 0.81
UBR5-207ENST00000520539 NOC3LQ8WTT2 800 aaKnown RBP20.1■□□□□ 0.81
UBR5-207ENST00000520539 GOLGA6L4A6NEF3 574 aa20.07■□□□□ 0.8
UBR5-207ENST00000520539 AMER1Q5JTC6 1135 aaPredicted RBP20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms